| | Survey and Summary Transcription by RNA polymerases I and III Marvin R. Paule and Robert J. White PMCID: PMC111039 Articles Intronic GIY-YIG endonuclease gene in the mitochondrial genome of Podospora curvicolla: evidence for mobility Cyril Saguez, Gaël Lecellier, and France Koll PMCID: PMC111034 Cold shock induces the insertion of a cryptic exon in the neurofibromatosis type 1 (NF1) mRNA Elisabet Ars, Eduard Serra, Susana de la Luna, Xavier Estivill, and Conxi Lázaro PMCID: PMC111054 Interaction of the yeast DExH-box RNA helicase Prp22p with the 3′ splice site during the second step of nuclear pre-mRNA splicing David S. McPheeters, Beate Schwer, and Peggy Muhlenkamp PMCID: PMC111051 The solution structure of [d(CGC)r(aaa)d(TTTGCG)]2: hybrid junctions flanked by DNA duplexes Shang-Te Hsu, Mei-Tsen Chou, and Jya-Wei Cheng PMCID: PMC111055 Interactions of the human, rat, Saccharomyces cerevisiae and Escherichia coli 3-methyladenine-DNA glycosylases with DNA containing dIMP residues Murat Saparbaev, Jean-Claude Mani, and Jacques Laval PMCID: PMC111053 Effects of RNA secondary structure on cellular antisense activity Timothy A. Vickers, Jacqueline R. Wyatt, and Susan M. Freier PMCID: PMC111043 Characterisation of the U83 and U84 small nucleolar RNAs: two novel 2′-O-ribose methylation guide RNAs that lack complementarities to ribosomal RNAs Beáta E. Jády and Tamás Kiss PMCID: PMC111033 Identification of human MutY homolog (hMYH) as a repair enzyme for 2-hydroxyadenine in DNA and detection of multiple forms of hMYH located in nuclei and mitochondria Toshio Ohtsubo, Kenichi Nishioka, Yasuyuki Imaiso, Shigenori Iwai, Hidetoshi Shimokawa, Hisanobu Oda, Toshiyuki Fujiwara, and Yusaku Nakabeppu PMCID: PMC111038 Assembly of archaeal signal recognition particle from recombinant components Shakhawat Hossain Bhuiyan, Krishne Gowda, Hitoshi Hotokezaka, and Christian Zwieb PMCID: PMC111052 Modified constructs of the tRNA TΨC domain to probe substrate conformational requirements of m1A58 and m5U54 tRNA methyltransferases Ranjita Sengupta, Saulius Vainauskas, Connie Yarian, Elzbieta Sochacka, Andrzej Malkiewicz, Richard H. Guenther, Karl M. Koshlap, and Paul F. Agris PMCID: PMC111031 Characterization of a cis-acting regulatory element in the protein coding region of thymidylate synthase mRNA Xiukun Lin, Leslie A. Parsels, Donna M. Voeller, Carmen J. Allegra, Gladys F. Maley, Frank Maley, and Edward Chu PMCID: PMC111044 Different roles for Abf1p and a T-rich promoter element in nucleosome organization of the yeast RPS28A gene Romeo F. Lascaris, Ellen de Groot, Peter-Bram’t Hoen, Willem H. Mager, and Rudi J. Planta PMCID: PMC111049 Genome sequences of Chlamydia trachomatis MoPn and Chlamydia pneumoniae AR39 T. D. Read, R. C. Brunham, C. Shen, S. R. Gill, J. F. Heidelberg, O. White, E. K. Hickey, J. Peterson, T. Utterback, K. Berry, S. Bass, K. Linher, J. Weidman, H. Khouri, B. Craven, C. Bowman, R. Dodson, M. Gwinn, W. Nelson, R. DeBoy, J. Kolonay, G. McClarty, S. L. Salzberg, J. Eisen, and C. M. Fraser PMCID: PMC111046 A new double-stranded RNA-binding protein that interacts with PKR Candace J. Coolidge and James G. Patton PMCID: PMC111047 Determination of L1 retrotransposition kinetics in cultured cells Eric M. Ostertag, Eline T. Luning Prak, Ralph J. DeBerardinis, John V. Moran, and Haig H. Kazazian, Jr PMCID: PMC111040 Requirement for PCNA and RPA in interstrand crosslink-induced DNA synthesis Lei Li, Carolyn A. Peterson, Xiaoshan Zhang, and Randy J. Legerski PMCID: PMC111036 Functional α-fragment of β-galactosidase can be expressed from the mobile group I intron PpLSU3 embedded in yeast pre-ribosomal RNA derived from the chromosomal rDNA locus Jue Lin and Volker M. Vogt PMCID: PMC111048 The initiator element of the Drosophila β2 tubulin gene core promoter contributes to gene expression in vivo but is not required for male germ-cell specific expression Ansgar Santel, Jörg Kaufmann, Ruth Hyland, and Renate Renkawitz-Pohl PMCID: PMC111050 Ligation reaction specificities of an NAD+-dependent DNA ligase from the hyperthermophile Aquifex aeolicus Jie Tong, Francis Barany, and Weiguo Cao PMCID: PMC111035 Pre-selection of integration sites imparts repeatable transgene expression Helen Wallace, Ray Ansell, John Clark, and Jim McWhir PMCID: PMC111032 A developmentally regulated deletion element with long terminal repeats has cis-acting sequences in the flanking DNA Namrata S. Patil and Kathleen M. Karrer PMCID: PMC111045 Cloning and characterisation of the Sry-related transcription factor gene Sox8 Goslik E. Schepers, Monica Bullejos, Brett M. Hosking, and Peter Koopman PMCID: PMC111037 Analysis of the yeast transcriptome with structural and functional categories: characterizing highly expressed proteins Ronald Jansen and Mark Gerstein PMCID: PMC111042 Species-specific regulation of alternative splicing in the C-terminal region of the p53 tumor suppressor gene M. Laverdière, J. Beaudoin, and Alain Lavigueur PMCID: PMC111041 NAR Methods Online A rapid genetic screening system for identifying gene-specific suppression constructs for use in human cells Greg M. Arndt, Margaret Patrikakis, and David Atkins PMCID: PMC111056 Endogenous oxidative DNA base modifications analysed with repair enzymes and GC/MS technique Pawel Jaruga, Elzbieta Speina, Daniel Gackowski, Barbara Tudek, and Ryszard Olinski PMCID: PMC111057 |
