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Volume 14(7);  July 2008
Mini-Review
RNA structure-based ribosome recruitment: Lessons from the Dicistroviridae intergenic region IRESes
Jennifer S. Pfingsten and Jeffrey S. Kieft
RNA. 2008 July; 14(7): 1255–1263. doi: 10.1261/rna.987808.
PMCID: PMC2441983
Letters to the Editor
Degeneracy of the genetic code and stability of the base pair at the second position of the anticodon
Jean Lehmann and Albert Libchaber
RNA. 2008 July; 14(7): 1264–1269. doi: 10.1261/rna.1029808.
PMCID: PMC2441979
Distinctive structures between chimpanzee and humanin a brain noncoding RNA
Artemy Beniaminov, Eric Westhof, and Alain Krol
RNA. 2008 July; 14(7): 1270–1275. doi: 10.1261/rna.1054608.
PMCID: PMC2441984
Bioinformatics
A computational screen for mouse signaling pathways targeted by microRNA clusters
Jianzhen Xu and Chiwai Wong
RNA. 2008 July; 14(7): 1276–1283. doi: 10.1261/rna.997708.
PMCID: PMC2441985
Reports
On the role of a conserved, potentially helix-breaking residue in the tRNA-binding α-helix of archaeal CCA-adding enzymes
Hyundae D. Cho, Vanita D. Sood, David Baker, and Alan M. Weiner
RNA. 2008 July; 14(7): 1284–1289. doi: 10.1261/rna.1060308.
PMCID: PMC2441987
Inhibition of translation in living eukaryotic cells by an RNA G-quadruplex motif
Amit Arora, Mariola Dutkiewicz, Vinod Scaria, Manoj Hariharan, Souvik Maiti, and Jens Kurreck
RNA. 2008 July; 14(7): 1290–1296. doi: 10.1261/rna.1001708.
PMCID: PMC2441988
Articles
Molecular architecture of a miRNA-regulated 3′ UTR
Dominic Didiano and Oliver Hobert
RNA. 2008 July; 14(7): 1297–1317. doi: 10.1261/rna.1082708.
PMCID: PMC2441980
Control of eIF4E cellular localization by eIF4E-binding proteins, 4E-BPs
Liwei Rong, Mark Livingstone, Rami Sukarieh, Emmanuel Petroulakis, Anne-Claude Gingras, Katherine Crosby, Bradley Smith, Roberto D. Polakiewicz, Jerry Pelletier, Maria A. Ferraiuolo, and Nahum Sonenberg
RNA. 2008 July; 14(7): 1318–1327. doi: 10.1261/rna.950608.
PMCID: PMC2441981
S. cerevisiae Vts1p induces deadenylation-dependent transcript degradation and interacts with the Ccr4p-Pop2p-Not deadenylase complex
Laura M. Rendl, Melissa A. Bieman, and Craig A. Smibert
RNA. 2008 July; 14(7): 1328–1336. doi: 10.1261/rna.955508.
PMCID: PMC2441989
Yeast translational response to high salinity: Global analysis reveals regulation at multiple levels
Daniel Melamed, Lilach Pnueli, and Yoav Arava
RNA. 2008 July; 14(7): 1337–1351. doi: 10.1261/rna.864908.
PMCID: PMC2441982
The 3′-UTR mediates the cellular localization of an mRNA encoding a short plasma membrane protein
Adi Loya, Lilach Pnueli, Yahav Yosefzon, Ydo Wexler, Michal Ziv-Ukelson, and Yoav Arava
RNA. 2008 July; 14(7): 1352–1365. doi: 10.1261/rna.867208.
PMCID: PMC2441994
The stimulatory RNA of the Visna-Maedi retrovirus ribosomal frameshifting signal is an unusual pseudoknot with an interstem element
Simon Pennell, Emily Manktelow, Andrew Flatt, Geoff Kelly, Stephen J. Smerdon, and Ian Brierley
RNA. 2008 July; 14(7): 1366–1377. doi: 10.1261/rna.1042108.
PMCID: PMC2441976
C. elegans La-related protein, LARP-1, localizes to germline P bodies and attenuates Ras-MAPK signaling during oogenesis
Keith Nykamp, Myon-Hee Lee, and Judith Kimble
RNA. 2008 July; 14(7): 1378–1389. doi: 10.1261/rna.1066008.
PMCID: PMC2441978
Initiating translation with D-amino acids
Yuki Goto, Hiroshi Murakami, and Hiroaki Suga
RNA. 2008 July; 14(7): 1390–1398. doi: 10.1261/rna.1020708.
PMCID: PMC2441986
A novel noncoding RNA processed by Drosha is restricted to nucleus in mouse
Gayatri Ganesan and Satyanarayana M.R. Rao
RNA. 2008 July; 14(7): 1399–1410. doi: 10.1261/rna.838308.
PMCID: PMC2441991
Dynamic guide–target interactions contribute to sequential 2′-O-methylation by a unique archaeal dual guide box C/D sRNP
Sanjay K. Singh, Priyatansh Gurha, and Ramesh Gupta
RNA. 2008 July; 14(7): 1411–1423. doi: 10.1261/rna.1003308.
PMCID: PMC2441990
Extracellular plasma RNA from colon cancer patients is confined in a vesicle-like structure and is mRNA-enriched
José Miguel García, Vanesa García, Cristina Peña, Gemma Domínguez, Javier Silva, Raquel Diaz, Pablo Espinosa, Maria Jesús Citores, Manuel Collado, and Félix Bonilla
RNA. 2008 July; 14(7): 1424–1432. doi: 10.1261/rna.755908.
PMCID: PMC2441977
Inducible expression of microRNA-194 is regulated by HNF-1α during intestinal epithelial cell differentiation
Kimihiro Hino, Kiichiro Tsuchiya, Taro Fukao, Kotaro Kiga, Ryuichi Okamoto, Takanori Kanai, and Mamoru Watanabe
RNA. 2008 July; 14(7): 1433–1442. doi: 10.1261/rna.810208.
PMCID: PMC2441992
In vitro expression of the HIV-2 genomic RNA is controlled by three distinct internal ribosome entry segments that are regulated by the HIV protease and the Gag polyprotein
Emiliano P. Ricci, Cécile H. Herbreteau, Didier Decimo, Andreas Schaupp, Siddhartha A.K. Datta, Alan Rein, Jean-Luc Darlix, and Théophile Ohlmann
RNA. 2008 July; 14(7): 1443–1455. doi: 10.1261/rna.813608.
PMCID: PMC2441975
Erratum
Ribozymes and RNA Catalysis. 2007. RSC Publishing, Cambridge, UK. ISBN (online): 978-1-84755-798-8, ISBN (print): 978-0-85404-253-1.
Harris Mike
RNA. 2008 July; 14(7): 1456.
PMCID: PMC2441993
Corrects: Harris Mike. Ribozymes and RNA Catalysis. 2007. RSC Publishing, Cambridge, UK. ISBN (online): 978-1-84755-798-8, ISBN (print): 978-0-85404-253-1. RNA. 2008 July; 14(7): 1456.
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