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Volume 16(12);  December 2007
In Memoriam
Remembering Daniel E. Koshland Jr. (1920–2007)
Frederick W. Dahlquist
Protein Sci. 2007 December; 16(12): 2583–2584.
PMCID: PMC2222820
Articles
Host–pathogen protein interactions predicted by comparative modeling
Fred P. Davis, David T. Barkan, Narayanan Eswar, James H. McKerrow, and Andrej Sali
Protein Sci. 2007 December; 16(12): 2585–2596. doi: 10.1110/ps.073228407.
PMCID: PMC2222825
Phosphoinositide binding regulates α-actinin CH2 domain structure: Analysis by hydrogen/deuterium exchange mass spectrometry
Stephen J. Full, Max L. Deinzer, P. Shing Ho, and Jeffrey A. Greenwood
Protein Sci. 2007 December; 16(12): 2597–2604. doi: 10.1110/ps.073146807.
PMCID: PMC2190733
The Staphylococcus aureus extracellular adherence protein (Eap) adopts an elongated but structured conformation in solution
Michal Hammel, Daniel Němeček, J. Andrew Keightley, George J. Thomas, Jr, and Brian V. Geisbrecht
Protein Sci. 2007 December; 16(12): 2605–2617. doi: 10.1110/ps.073170807.
PMCID: PMC2222813
Requirements for peptidyl-prolyl isomerization activity: A comprehensive mutational analysis of the substrate-binding cavity of FK506-binding protein 12
Teikichi Ikura and Nobutoshi Ito
Protein Sci. 2007 December; 16(12): 2618–2625. doi: 10.1110/ps.073203707.
PMCID: PMC2222811
Crystal structures of the N-terminal kinase domain of human RSK1 bound to three different ligands: Implications for the design of RSK1 specific inhibitors
Mari Ikuta, Maria Kornienko, Noel Byrne, John C. Reid, Shinji Mizuarai, Hidehito Kotani, and Sanjeev K. Munshi
Protein Sci. 2007 December; 16(12): 2626–2635. doi: 10.1110/ps.073123707.
PMCID: PMC2222827
Saturation mutagenesis of Asn152 reveals a substrate selectivity switch in P99 cephalosporinase
Scott T. Lefurgy, René M. de Jong, and Virginia W. Cornish
Protein Sci. 2007 December; 16(12): 2636–2646. doi: 10.1110/ps.073092407.
PMCID: PMC2222824
Distortion of flavin geometry is linked to ligand binding in cholesterol oxidase
Artem Y. Lyubimov, Kathryn Heard, Hui Tang, Nicole S. Sampson, and Alice Vrielink
Protein Sci. 2007 December; 16(12): 2647–2656. doi: 10.1110/ps.073168207.
PMCID: PMC2222809
Characterization of substrate binding and catalysis in the potential antibacterial target N-acetylglucosamine-1-phosphate uridyltransferase (GlmU)
Igor Mochalkin, Sandra Lightle, Yaqi Zhu, Jeffrey F. Ohren, Cindy Spessard, Nickolay Y. Chirgadze, Craig Banotai, Michael Melnick, and Laura McDowell
Protein Sci. 2007 December; 16(12): 2657–2666. doi: 10.1110/ps.073135107.
PMCID: PMC2222810
Expression screening of integral membrane proteins from Helicobacter pylori 26695
Georgios Psakis, Sandra Nitschkowski, Caterina Holz, Daniel Kreß, Manuel Maestre-Reyna, Julia Polaczek, Gerd Illing, and Lars-Oliver Essen
Protein Sci. 2007 December; 16(12): 2667–2676. doi: 10.1110/ps.073104707.
PMCID: PMC2222815
Characterization of the binding surface of the translocated intimin receptor, an essential protein for EPEC and EHEC cell adhesion
Nathan T. Ross and Benjamin L. Miller
Protein Sci. 2007 December; 16(12): 2677–2683. doi: 10.1110/ps.073128607.
PMCID: PMC2222828
Thiamine diphosphate binds to intermediates in the assembly of adenovirus fiber knob trimers in Escherichia coli
Ryan Schulz, Yian-Biao Zhang, Chang-Jun Liu, and Paul Freimuth
Protein Sci. 2007 December; 16(12): 2684–2693. doi: 10.1110/ps.072805007.
PMCID: PMC2222807
Computational design of the Fyn SH3 domain with increased stability through optimization of surface charge–charge interactions
Katrina L. Schweiker, Arash Zarrine-Afsar, Alan R. Davidson, and George I. Makhatadze
Protein Sci. 2007 December; 16(12): 2694–2702. doi: 10.1110/ps.073091607.
PMCID: PMC2222822
An alternative excited-state proton transfer pathway in green fluorescent protein variant S205V
Xiaokun Shu, Pavel Leiderman, Rinat Gepshtein, Nicholas R. Smith, Karen Kallio, Dan Huppert, and S. James Remington
Protein Sci. 2007 December; 16(12): 2703–2710. doi: 10.1110/ps.073112007.
PMCID: PMC2222808
Protein kinase C delta is phosphorylated on five novel Ser/Thr sites following inducible overexpression in human colorectal cancer cells
Arkadiusz Welman, John R. Griffiths, Anthony D. Whetton, and Caroline Dive
Protein Sci. 2007 December; 16(12): 2711–2715. doi: 10.1110/ps.072874607.
PMCID: PMC2222818
Monte Carlo refinement of rigid-body protein docking structures with backbone displacement and side-chain optimization
Stephan Lorenzen and Yang Zhang
Protein Sci. 2007 December; 16(12): 2716–2725. doi: 10.1110/ps.072847207.
PMCID: PMC2222816
A rapid and universal tandem-purification strategy for recombinant proteins
Andrew J. McCluskey, Gregory M.K. Poon, and Jean Gariépy
Protein Sci. 2007 December; 16(12): 2726–2732. doi: 10.1110/ps.072894407.
PMCID: PMC2222826
Anion modulation of the 1H/2H exchange rates in backbone amide protons monitored by NMR spectroscopy
Xavier Tadeo, David Castaño, and Oscar Millet
Protein Sci. 2007 December; 16(12): 2733–2740. doi: 10.1110/ps.073027007.
PMCID: PMC2222829
Large-scale preparation of the homogeneous LolA–lipoprotein complex and efficient in vitro transfer of lipoproteins to the outer membrane in a LolB-dependent manner
Shoji Watanabe, Yuki Oguchi, Naoko Yokota, and Hajime Tokuda
Protein Sci. 2007 December; 16(12): 2741–2749. doi: 10.1110/ps.073101307.
PMCID: PMC2222812
Protein Structure Reports
Solution structure of the region 51–160 of human KIN17 reveals an atypical winged helix domain
Ludovic Carlier, Joël Couprie, Albane le Maire, Laure Guilhaudis, Isabelle Milazzo-Segalas, Marie Courçon, Mireille Moutiez, Muriel Gondry, Daniel Davoust, Bernard Gilquin, and Sophie Zinn-Justin
Protein Sci. 2007 December; 16(12): 2750–2755. doi: 10.1110/ps.073079107.
PMCID: PMC2222814
Atomic-resolution crystal structure of the antiviral lectin scytovirin
Tinoush Moulaei, Istvan Botos, Natasza E. Ziółkowska, Heidi R. Bokesch, Lauren R. Krumpe, Tawnya C. McKee, Barry R. O'Keefe, Zbigniew Dauter, and Alexander Wlodawer
Protein Sci. 2007 December; 16(12): 2756–2760. doi: 10.1110/ps.073157507.
PMCID: PMC2222830
Crystal structure of the kinase domain of serum and glucocorticoid-regulated kinase 1 in complex with AMP–PNP
Baoguang Zhao, Ruth Lehr, Angela M. Smallwood, Thau F. Ho, Kathleen Maley, Tanya Randall, Martha S. Head, Kristin K. Koretke, and Christine G. Schnackenberg
Protein Sci. 2007 December; 16(12): 2761–2769. doi: 10.1110/ps.073161707.
PMCID: PMC2222817
For the Record
A de novo designed protein–protein interface
Po-Ssu Huang, John J. Love, and Stephen L. Mayo
Protein Sci. 2007 December; 16(12): 2770–2774. doi: 10.1110/ps.073125207.
PMCID: PMC2222823
Correction
CORRECTIONS
Protein Sci. 2007 December; 16(12): 2775.
PMCID: PMC2222819
Corrects: Daniel A.P. Gutmann, et al. A high-throughput method for membrane protein solubility screening: The ultracentrifugation dispersity sedimentation assay. Protein Sci. 2007 July; 16(7): 1422–1428.
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