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Volume 8(4);  April 1999
Research Articles
CORA--topological fingerprints for protein structural families.
C. A. Orengo
Protein Sci. 1999 April; 8(4): 699–715.
PMCID: PMC2144314
Predicting the structures of 18 peptides using Geocore.
K. Ishikawa, K. Yue, and K. A. Dill
Protein Sci. 1999 April; 8(4): 716–721.
PMCID: PMC2144307
Dissection of the structural and functional role of a conserved hydration site in RNase T1.
U. Langhorst, R. Loris, V. P. Denisov, J. Doumen, P. Roose, D. Maes, B. Halle, and J. Steyaert
Protein Sci. 1999 April; 8(4): 722–730.
PMCID: PMC2144308
In vitro evolution of thermostable p53 variants.
I. Matsumura and A. D. Ellington
Protein Sci. 1999 April; 8(4): 731–740.
PMCID: PMC2144309
Effects of commonly used cryoprotectants on glycogen phosphorylase activity and structure.
K. E. Tsitsanou, N. G. Oikonomakos, S. E. Zographos, V. T. Skamnaki, M. Gregoriou, K. A. Watson, L. N. Johnson, and G. W. Fleet
Protein Sci. 1999 April; 8(4): 741–749.
PMCID: PMC2144310
Factors limiting the performance of prediction-based fold recognition methods.
X. de la Cruz and J. M. Thornton
Protein Sci. 1999 April; 8(4): 750–759.
PMCID: PMC2144320
Actin surface structure revealed by antibody imprints: evaluation of phage-display analysis of anti-actin antibodies.
A. J. Jesaitis, D. Gizachew, E. A. Dratz, D. W. Siemsen, K. C. Stone, and J. B. Burritt
Protein Sci. 1999 April; 8(4): 760–770.
PMCID: PMC2144298
Genome analysis: Assigning protein coding regions to three-dimensional structures.
A. A. Salamov, M. Suwa, C. A. Orengo, and M. B. Swindells
Protein Sci. 1999 April; 8(4): 771–777.
PMCID: PMC2144302
Nucleotide binding to the G12V-mutant of Cdc42 investigated by X-ray diffraction and fluorescence spectroscopy: two different nucleotide states in one crystal.
M. G. Rudolph, A. Wittinghofer, and I. R. Vetter
Protein Sci. 1999 April; 8(4): 778–787.
PMCID: PMC2144318
Helicity of alpha(404-451) and beta(394-445) tubulin C-terminal recombinant peptides.
M. A. Jimenez, J. A. Evangelio, C. Aranda, A. Lopez-Brauet, D. Andreu, M. Rico, R. Lagos, J. M. Andreu, and O. Monasterio
Protein Sci. 1999 April; 8(4): 788–799.
PMCID: PMC2144297
The use of dipolar couplings for determining the solution structure of rat apo-S100B(betabeta).
A. C. Drohat, N. Tjandra, D. M. Baldisseri, and D. J. Weber
Protein Sci. 1999 April; 8(4): 800–809.
PMCID: PMC2144316
Structural and phylogenetic characterization of human SLURP-1, the first secreted mammalian member of the Ly-6/uPAR protein superfamily.
K. Adermann, F. Wattler, S. Wattler, G. Heine, M. Meyer, W. G. Forssmann, and M. Nehls
Protein Sci. 1999 April; 8(4): 810–819.
PMCID: PMC2144295
Structural basis of neurophysin hormone specificity: Geometry, polarity, and polarizability in aromatic ring interactions.
E. Breslow, V. Mombouyran, R. Deeb, C. Zheng, J. P. Rose, B. C. Wang, and R. H. Haschemeyer
Protein Sci. 1999 April; 8(4): 820–831.
PMCID: PMC2144317
Thermodynamic stability of ribonuclease A in alkylurea solutions and preferential solvation changes accompanying its thermal denaturation: a calorimetric and spectroscopic study.
N. Poklar, N. Petrovcic, M. Oblak, and G. Vesnaver
Protein Sci. 1999 April; 8(4): 832–840.
PMCID: PMC2144304
WW: An isolated three-stranded antiparallel beta-sheet domain that unfolds and refolds reversibly; evidence for a structured hydrophobic cluster in urea and GdnHCl and a disordered thermal unfolded state.
E. K. Koepf, H. M. Petrassi, M. Sudol, and J. W. Kelly
Protein Sci. 1999 April; 8(4): 841–853.
PMCID: PMC2144315
De novo design of a monomeric three-stranded antiparallel beta-sheet.
E. de Alba, J. Santoro, M. Rico, and M. A. Jiménez
Protein Sci. 1999 April; 8(4): 854–865.
PMCID: PMC2144301
Specificity of coenzyme analogues and fragments in promoting or impeding the refolding of clostridial glutamate dehydrogenase.
S. Aghajanian, T. P. Walsh, and P. C. Engel
Protein Sci. 1999 April; 8(4): 866–872.
PMCID: PMC2144299
The compact and expanded denatured conformations of apomyoglobin in the methanol-water solvent.
Y. O. Kamatari, S. Ohji, T. Konno, Y. Seki, K. Soda, M. Kataoka, and K. Akasaka
Protein Sci. 1999 April; 8(4): 873–882.
PMCID: PMC2144319
Selection of antibody probes to correlate protein sequence domains with their structural distribution.
M. Valle, M. Muñoz, L. Kremer, J. M. Valpuesta, C. Martínez-A, J. L. Carrascosa, and J. P. Albar
Protein Sci. 1999 April; 8(4): 883–889.
PMCID: PMC2144296
The loss in hydrophobic surface area resulting from a Leu to Val mutation at the N-terminus of the aldehyde dehydrogenase presequence prevents import of the protein into mitochondria.
P. K. Hammen, T. S. Heard, M. Waltner, and H. Weiner
Protein Sci. 1999 April; 8(4): 890–896.
PMCID: PMC2144303
Protein structural topology: Automated analysis and diagrammatic representation.
D. R. Westhead, T. W. Slidel, T. P. Flores, and J. M. Thornton
Protein Sci. 1999 April; 8(4): 897–904.
PMCID: PMC2144300
Nucleolar protein B23 has molecular chaperone activities.
A. Szebeni and M. O. Olson
Protein Sci. 1999 April; 8(4): 905–912.
PMCID: PMC2144306
Computational studies on mutant protein stability: The correlation between surface thermal expansion and protein stability.
R. Palma and P. M. Curmi
Protein Sci. 1999 April; 8(4): 913–920.
PMCID: PMC2144311
A minimal peptide substrate in biotin holoenzyme synthetase-catalyzed biotinylation.
D. Beckett, E. Kovaleva, and P. J. Schatz
Protein Sci. 1999 April; 8(4): 921–929.
PMCID: PMC2144313
Disulfide engineering at the dimer interface of Lactobacillus casei thymidylate synthase: crystal structure of the T155C/E188C/C244T mutant.
S. S. Velanker, R. S. Gokhale, S. S. Ray, B. Gopal, S. Parthasarathy, D. V. Santi, P. Balaram, and M. R. Murthy
Protein Sci. 1999 April; 8(4): 930–933.
PMCID: PMC2144305
Carbamate kinase: New structural machinery for making carbamoyl phosphate, the common precursor of pyrimidines and arginine.
A. Marina, P. M. Alzari, J. Bravo, M. Uriarte, B. Barcelona, I. Fita, and V. Rubio
Protein Sci. 1999 April; 8(4): 934–940.
PMCID: PMC2144312
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