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Volume 7(8);  August 1998
Research Articles
All in the family: structural and evolutionary relationships among three modular proteins with diverse functions and variable assembly.
M. Bergdoll, L. D. Eltis, A. D. Cameron, P. Dumas, and J. T. Bolin
Protein Sci. 1998 August; 7(8): 1661–1670.
PMCID: PMC2144073
Improving the binding affinity of an antibody using molecular modeling and site-directed mutagenesis.
C. L. Casipit, R. Tal, V. Wittman, P. A. Chavaillaz, K. Arbuthnott, J. A. Weidanz, J. A. Jiao, and H. C. Wong
Protein Sci. 1998 August; 7(8): 1671–1680.
PMCID: PMC2144089
Correlation between the 1.6 A crystal structure and mutational analysis of keratinocyte growth factor.
T. D. Osslund, R. Syed, E. Singer, E. W. Hsu, R. Nybo, B. L. Chen, T. Harvey, T. Arakawa, L. O. Narhi, A. Chirino, and C. F. Morris
Protein Sci. 1998 August; 7(8): 1681–1690.
PMCID: PMC2144086
Binding of a substrate analog to a domain swapping protein: X-ray structure of the complex of bovine seminal ribonuclease with uridylyl(2',5')adenosine.
L. Vitagliano, S. Adinolfi, A. Riccio, F. Sica, A. Zagari, and L. Mazzarella
Protein Sci. 1998 August; 7(8): 1691–1699.
PMCID: PMC2144088
Analysis of zinc binding sites in protein crystal structures.
I. L. Alberts, K. Nadassy, and S. J. Wodak
Protein Sci. 1998 August; 7(8): 1700–1716.
PMCID: PMC2144076
Thermodynamics of the reconstitution of tuna cytochrome c from two peptide fragments.
A. Yokota, H. Takenaka, T. Oh, Y. Noda, and S. Segawa
Protein Sci. 1998 August; 7(8): 1717–1727.
PMCID: PMC2144077
Role of P225 and the C136-C201 disulfide bond in tissue plasminogen activator.
A. Vindigni and E. Di Cera
Protein Sci. 1998 August; 7(8): 1728–1737.
PMCID: PMC2144078
Role of the 6-20 disulfide bridge in the structure and activity of epidermal growth factor.
K. J. Barnham, A. M. Torres, D. Alewood, P. F. Alewood, T. Domagala, E. C. Nice, and R. S. Norton
Protein Sci. 1998 August; 7(8): 1738–1749.
PMCID: PMC2144085
Molecular mechanisms of resistance: free energy calculations of mutation effects on inhibitor binding to HIV-1 protease.
S. W. Rick, I. A. Topol, J. W. Erickson, and S. K. Burt
Protein Sci. 1998 August; 7(8): 1750–1756.
PMCID: PMC2144074
Probing enzyme quaternary structure by combinatorial mutagenesis and selection.
G. MacBeath, P. Kast, and D. Hilvert
Protein Sci. 1998 August; 7(8): 1757–1767.
PMCID: PMC2144083
Enzyme-mononucleotide interactions: three different folds share common structural elements for ATP recognition.
K. A. Denessiouk, J. V. Lehtonen, and M. S. Johnson
Protein Sci. 1998 August; 7(8): 1768–1771.
PMCID: PMC2144091
Selecting near-native conformations in homology modeling: the role of molecular mechanics and solvation terms.
A. Janardhan and S. Vajda
Protein Sci. 1998 August; 7(8): 1772–1780.
PMCID: PMC2144075
The role of the 6 lysines and the terminal amine of Escherichia coli single-strand binding protein in its binding of single-stranded DNA.
J. Chen, D. L. Smith, and M. A. Griep
Protein Sci. 1998 August; 7(8): 1781–1788.
PMCID: PMC2144092
The magnitude of changes in guanidine-HCl unfolding m-values in the protein, iso-1-cytochrome c, depends upon the substructure containing the mutation.
B. Hammack, K. Attfield, D. Clayton, E. Dec, A. Dong, C. Sarisky, and B. E. Bowler
Protein Sci. 1998 August; 7(8): 1789–1795.
PMCID: PMC2144081
Efficient sequence analysis of the six gene products (7-74 kDa) from the Escherichia coli thiamin biosynthetic operon by tandem high-resolution mass spectrometry.
N. L. Kelleher, S. V. Taylor, D. Grannis, C. Kinsland, H. J. Chiu, T. P. Begley, and F. W. McLafferty
Protein Sci. 1998 August; 7(8): 1796–1801.
PMCID: PMC2144080
Aromatic L-amino acid decarboxylase: conformational change in the flexible region around Arg334 is required during the transaldimination process.
S. Ishii, H. Hayashi, A. Okamoto, and H. Kagamiyama
Protein Sci. 1998 August; 7(8): 1802–1810.
PMCID: PMC2144087
Opposite behavior of two isozymes when refolding in the presence of non-ionic detergents.
F. Doñate, A. Artigues, A. Iriarte, and M. Martinez-Carrion
Protein Sci. 1998 August; 7(8): 1811–1820.
PMCID: PMC2144090
Turn scanning by site-directed mutagenesis: application to the protein folding problem using the intestinal fatty acid binding protein.
K. Kim and C. Frieden
Protein Sci. 1998 August; 7(8): 1821–1828.
PMCID: PMC2144079
A superfamily of metalloenzymes unifies phosphopentomutase and cofactor-independent phosphoglycerate mutase with alkaline phosphatases and sulfatases.
M. Y. Galperin, A. Bairoch, and E. V. Koonin
Protein Sci. 1998 August; 7(8): 1829–1835.
PMCID: PMC2144072
Crystallization of recombinant human heme oxygenase-1.
D. J. Schuller, A. Wilks, P. Ortiz de Montellano, and T. L. Poulos
Protein Sci. 1998 August; 7(8): 1836–1838.
PMCID: PMC2144071
Overexpression of recombinant proteins with a C-terminal thiocarboxylate: implications for protein semisynthesis and thiamin biosynthesis.
C. Kinsland, S. V. Taylor, N. L. Kelleher, F. W. McLafferty, and T. P. Begley
Protein Sci. 1998 August; 7(8): 1839–1842.
PMCID: PMC2144084
Identification of a Frizzled-like cysteine rich domain in the extracellular region of developmental receptor tyrosine kinases.
J. Saldanha, J. Singh, and D. Mahadevan
Protein Sci. 1998 August; 7(8): 1632–1635.
PMCID: PMC2144082
Corrects: J. Saldanha, et al. Identification of a Frizzled-like cysteine rich domain in the extracellular region of developmental receptor tyrosine kinases. Protein Sci. 1998 August; 7(8): 1632–1635.
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