| | Editorial Oceanic Metagenomics: Global Ocean Sampling Collection Hemai Parthasarathy, Emma Hill, and Catriona MacCallum PMCID: PMC1821003 Synopses Protein–RNA Interaction Links Fragile X Syndrome and Alzheimer Disease Richard Robinson PMCID: PMC1820828 Oceanic Metagenomics: Untapped Bounty: Sampling the Seas to Survey Microbial Biodiversity Liza Gross PMCID: PMC1821062 A Single Gene Coordinates the Social Life of Honeybees Liza Gross PMCID: PMC1808118 Does Bacteriophage ϕ29 Pack Its DNA with a Twist? Mary Hoff PMCID: PMC1800306 Essays Synthetic Biology: Caught between Property Rights, the Public Domain, and the Commons Arti Rai and James Boyle PMCID: PMC1821064 Oceanic Metagenomics: Environmental Shotgun Sequencing: Its Potential and Challenges for Studying the Hidden World of Microbes Jonathan A Eisen PMCID: PMC1821061 Feature Oceanic Metagenomics: Sorcerer II: The Search for Microbial Diversity Roils the Waters Henry Nicholls PMCID: PMC1821058 Community Page Oceanic Metagenomics: CAMERA: A Community Resource for Metagenomics Rekha Seshadri, Saul A Kravitz, Larry Smarr, Paul Gilna, and Marvin Frazier PMCID: PMC1821059 Research Articles Oceanic Metagenomics: The Sorcerer II Global Ocean Sampling Expedition: Expanding the Universe of Protein Families Shibu Yooseph, Granger Sutton, Douglas B Rusch, Aaron L Halpern, Shannon J Williamson, Karin Remington, Jonathan A Eisen, Karla B Heidelberg, Gerard Manning, Weizhong Li, Lukasz Jaroszewski, Piotr Cieplak, Christopher S Miller, Huiying Li, Susan T Mashiyama, Marcin P Joachimiak, Christopher van Belle, John-Marc Chandonia, David A Soergel, Yufeng Zhai, Kannan Natarajan, Shaun Lee, Benjamin J Raphael, Vineet Bafna, Robert Friedman, Steven E Brenner, Adam Godzik, David Eisenberg, Jack E Dixon, Susan S Taylor, Robert L Strausberg, Marvin Frazier, and J. Craig Venter PMCID: PMC1821046 Oceanic Metagenomics: Structural and Functional Diversity of the Microbial Kinome Natarajan Kannan, Susan S Taylor, Yufeng Zhai, J. Craig Venter, and Gerard Manning PMCID: PMC1821047 Absence of Ret Signaling in Mice Causes Progressive and Late Degeneration of the Nigrostriatal System Edgar R Kramer, Liviu Aron, Geert M. J Ramakers, Sabine Seitz, Xiaoxi Zhuang, Klaus Beyer, Marten P Smidt, and Rüdiger Klein PMCID: PMC1808500 Revisiting the Basic Reproductive Number for Malaria and Its Implications for Malaria Control David L Smith, F. Ellis McKenzie, Robert W Snow, and Simon I Hay PMCID: PMC1802755 In Vivo Reinsertion of Excised Episomes by the V(D)J Recombinase: A Potential Threat to Genomic Stability Katrina Vanura, Bertrand Montpellier, Trang Le, Salvatore Spicuglia, Jean-Marc Navarro, Olivier Cabaud, Sandrine Roulland, Elodie Vachez, Immo Prinz, Pierre Ferrier, Rodrig Marculescu, Ulrich Jäger, and Bertrand Nadel PMCID: PMC1820826 Surviving Endoplasmic Reticulum Stress Is Coupled to Altered Chondrocyte Differentiation and Function Kwok Yeung Tsang, Danny Chan, Deborah Cheslett, Wilson C. W Chan, Chi Leong So, Ian G Melhado, Tori W. Y Chan, Kin Ming Kwan, Ernst B Hunziker, Yoshihiko Yamada, John F Bateman, Kenneth M. C Cheung, and Kathryn S. E Cheah PMCID: PMC1820825 LACHESIS Restricts Gametic Cell Fate in the Female Gametophyte of Arabidopsis Rita Groß-Hardt, Christina Kägi, Nadine Baumann, James M Moore, Ramamurthy Baskar, Wendy B Gagliano, Gerd Jürgens, and Ueli Grossniklaus PMCID: PMC1804285 FMRP Mediates mGluR5-Dependent Translation of Amyloid Precursor Protein Cara J Westmark and James S Malter PMCID: PMC1808499 Functional Modulation of Cardiac Form through Regionally Confined Cell Shape Changes Heidi J Auman, Hope Coleman, Heather E Riley, Felix Olale, Huai-Jen Tsai, and Deborah Yelon PMCID: PMC1802756 Auditory Short-Term Memory Behaves Like Visual Short-Term Memory Kristina M Visscher, Elina Kaplan, Michael J Kahana, and Robert Sekuler PMCID: PMC1800308 Genome-Wide Profiling and Analysis of Arabidopsis siRNAs Kristin D Kasschau, Noah Fahlgren, Elisabeth J Chapman, Christopher M Sullivan, Jason S Cumbie, Scott A Givan, and James C Carrington PMCID: PMC1820830 Experimental Test of Connector Rotation during DNA Packaging into Bacteriophage ϕ29 Capsids Thorsten Hugel, Jens Michaelis, Craig L Hetherington, Paul J Jardine, Shelley Grimes, Jessica M Walter, Wayne Falk, Dwight L Anderson, and Carlos Bustamante PMCID: PMC1800307 A Burst-Based “Hebbian” Learning Rule at Retinogeniculate Synapses Links Retinal Waves to Activity-Dependent Refinement Daniel A Butts, Patrick O Kanold, and Carla J Shatz PMCID: PMC1808114 The Gene vitellogenin Has Multiple Coordinating Effects on Social Organization C. Mindy Nelson, Kate E Ihle, M. Kim Fondrk, Robert E Page, Jr., and Gro V Amdam PMCID: PMC1808115 Als3 Is a Candida albicans Invasin That Binds to Cadherins and Induces Endocytosis by Host Cells Quynh T Phan, Carter L Myers, Yue Fu, Donald C Sheppard, Michael R Yeaman, William H Welch, Ashraf S Ibrahim, John E Edwards, Jr., and Scott G Filler PMCID: PMC1802757 Retinal Ganglion Cells Can Rapidly Change Polarity from Off to On Maria Neimark Geffen, Saskia E. J de Vries, and Markus Meister PMCID: PMC1808116 Arkadia Enhances Nodal/TGF-β Signaling by Coupling Phospho-Smad2/3 Activity and Turnover Konstantinos J Mavrakis, Rebecca L Andrew, Kian Leong Lee, Chariklia Petropoulou, James E Dixon, Naveenan Navaratnam, Dominic P Norris, and Vasso Episkopou PMCID: PMC1808117 A Novel Role for the TIR Domain in Association with Pathogen-Derived Elicitors Tessa M Burch-Smith, Michael Schiff, Jeffrey L Caplan, Jeffrey Tsao, Kirk Czymmek, and Savithramma P Dinesh-Kumar PMCID: PMC1820829 Oceanic Metagenomics: The Sorcerer II Global Ocean Sampling Expedition: Northwest Atlantic through Eastern Tropical Pacific Douglas B Rusch, Aaron L Halpern, Granger Sutton, Karla B Heidelberg, Shannon Williamson, Shibu Yooseph, Dongying Wu, Jonathan A Eisen, Jeff M Hoffman, Karin Remington, Karen Beeson, Bao Tran, Hamilton Smith, Holly Baden-Tillson, Clare Stewart, Joyce Thorpe, Jason Freeman, Cynthia Andrews-Pfannkoch, Joseph E Venter, Kelvin Li, Saul Kravitz, John F Heidelberg, Terry Utterback, Yu-Hui Rogers, Luisa I Falcón, Valeria Souza, Germán Bonilla-Rosso, Luis E Eguiarte, David M Karl, Shubha Sathyendranath, Trevor Platt, Eldredge Bermingham, Victor Gallardo, Giselle Tamayo-Castillo, Michael R Ferrari, Robert L Strausberg, Kenneth Nealson, Robert Friedman, Marvin Frazier, and J. Craig Venter PMCID: PMC1821060 |
