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Volume 29(10);  May 15, 2001
Articles
Transcription of the Schizosaccharomyces pombe U2 gene in vivo and in vitro is directed by two essential promoter elements
Dewang Zhou and Susan M. Lobo-Ruppert
Nucleic Acids Res. 2001 May 15; 29(10): 2003–2011.
PMCID: PMC55464
Analysis of a donor gene region for a variant surface glycoprotein and its expression site in African trypanosomes
Douglas J. LaCount, Najib M. El-Sayed, Samir Kaul, David Wanless, C. Michael R. Turner, and John E. Donelson
Nucleic Acids Res. 2001 May 15; 29(10): 2012–2019.
PMCID: PMC55451
The Saccharomyces cerevisiae RAD9 cell cycle checkpoint gene is required for optimal repair of UV-induced pyrimidine dimers in both G1 and G2/M phases of the cell cycle
Nisreen M. Al-Moghrabi, Ibtehaj S. Al-Sharif, and Abdelilah Aboussekhra
Nucleic Acids Res. 2001 May 15; 29(10): 2020–2025.
PMCID: PMC55462
Charge transport through DNA four-way junctions
Duncan T. Odom, Erik A. Dill, and Jacqueline K. Barton
Nucleic Acids Res. 2001 May 15; 29(10): 2026–2033.
PMCID: PMC55456
Thermodynamic properties of duplex DNA containing a site-specific d(GpG) intrastrand crosslink formed by an antitumor dinuclear platinum complex
Ctirad Hofr, Nicholas Farrell, and Viktor Brabec
Nucleic Acids Res. 2001 May 15; 29(10): 2034–2040.
PMCID: PMC55458
Antisense oligonucleotides selected by hybridisation to scanning arrays are effective reagents in vivo
Muhammad Sohail, Helfrid Hochegger, Andrea Klotzbücher, Rene Le Guellec, Tim Hunt, and Edwin M. Southern
Nucleic Acids Res. 2001 May 15; 29(10): 2041–2051.
PMCID: PMC55457
UV induces nucleolar translocation of ING1 through two distinct nucleolar targeting sequences
Michelle Scott, François-Michel Boisvert, Diego Vieyra, Randal N. Johnston, David P. Bazett-Jones, and Karl Riabowol
Nucleic Acids Res. 2001 May 15; 29(10): 2052–2058.
PMCID: PMC55466
Interspecies conservation of gene order and intron–exon structure in a genomic locus of high gene density and complexity in Plasmodium
Leonard H. M. van Lin, Tomasino Pace, Chris J. Janse, Cecilia Birago, Jai Ramesar, Leonardo Picci, Marta Ponzi, and Andrew P. Waters
Nucleic Acids Res. 2001 May 15; 29(10): 2059–2068.
PMCID: PMC55447
Pyrazolo[3,4-d]pyrimidine nucleic acids: adjustment of dA-dT to dG-dC base pair stability
Frank Seela and Georg Becher
Nucleic Acids Res. 2001 May 15; 29(10): 2069–2078.
PMCID: PMC55453
Efficient cationic lipid-mediated delivery of antisense oligonucleotides into eukaryotic cells: down-regulation of the corticotropin-releasing factor receptor
Fuxin Shi, Anita Nomden, Volker Oberle, Jan. B. F. N. Engberts, and Dick Hoekstra
Nucleic Acids Res. 2001 May 15; 29(10): 2079–2087.
PMCID: PMC55445
Rearrangement of structured RNA via branch migration structures catalysed by the highly related DEAD-box proteins p68 and p72
Oliver G. Rössler, Andreas Straka, and Hans Stahl
Nucleic Acids Res. 2001 May 15; 29(10): 2088–2096.
PMCID: PMC55448
Incoming nucleotide binds to Klenow ternary complex leading to stable physical sequestration of preceding dNTP on DNA
Sunita Ramanathan, K. V. R. Chary, and Basuthkar J. Rao
Nucleic Acids Res. 2001 May 15; 29(10): 2097–2105.
PMCID: PMC55446
Role of the ITS2-proximal stem and evidence for indirect recognition of processing sites in pre-rRNA processing in yeast
Colette A. Côté and Brenda A. Peculis
Nucleic Acids Res. 2001 May 15; 29(10): 2106–2116.
PMCID: PMC55465
A reliable assessment of 8-oxo-2-deoxyguanosine levels in nuclear and mitochondrial DNA using the sodium iodide method to isolate DNA
Michelle L. Hamilton, ZhongMao Guo, Clinton D. Fuller, Holly Van Remmen, Walter F. Ward, Steven N. Austad, Dean A. Troyer, Ian Thompson, and Arlan Richardson
Nucleic Acids Res. 2001 May 15; 29(10): 2117–2126.
PMCID: PMC55450
Two Arabidopsis methylation-deficiency mutations confer only partial effects on a methylated endogenous gene family
Lisa Bartee and Judith Bender
Nucleic Acids Res. 2001 May 15; 29(10): 2127–2134.
PMCID: PMC55449
Discovering common stem–loop motifs in unaligned RNA sequences
Jan Gorodkin, Shawn L. Stricklin, and Gary D. Stormo
Nucleic Acids Res. 2001 May 15; 29(10): 2135–2144.
PMCID: PMC55461
The complete genome sequence of the murine respiratory pathogen Mycoplasma pulmonis
Isabelle Chambaud, Roland Heilig, Stéphane Ferris, Valérie Barbe, Delphine Samson, Frédérique Galisson, Ivan Moszer, Kevin Dybvig, Henri Wróblewski, Alain Viari, Eduardo P.C. Rocha, and Alain Blanchard
Nucleic Acids Res. 2001 May 15; 29(10): 2145–2153.
PMCID: PMC55444
CREB-H: a novel mammalian transcription factor belonging to the CREB/ATF family and functioning via the box-B element with a liver-specific expression
Yoshihiro Omori, Jun-ichi Imai, Manabu Watanabe, Takami Komatsu, Yutaka Suzuki, Kohsuke Kataoka, Shinya Watanabe, Akira Tanigami, and Sumio Sugano
Nucleic Acids Res. 2001 May 15; 29(10): 2154–2162.
PMCID: PMC55463
Hybridization of 2′-ribose modified mixed-sequence oligonucleotides: thermodynamic and kinetic studies
Ali Sabahi, Jesse Guidry, Gopal B. Inamati, Muthiah Manoharan, and Pernilla Wittung-Stafshede
Nucleic Acids Res. 2001 May 15; 29(10): 2163–2170.
PMCID: PMC55455
Characterization of oligodeoxyribonucleotide synthesis on glass plates
Eric LeProust, Hua Zhang, Peilin Yu, Xiaochuan Zhou, and Xiaolian Gao
Nucleic Acids Res. 2001 May 15; 29(10): 2171–2180.
PMCID: PMC55452
Phenotypic analysis of genes encoding yeast zinc cluster proteins
Bassel Akache, Keqiang Wu, and Bernard Turcotte
Nucleic Acids Res. 2001 May 15; 29(10): 2181–2190.
PMCID: PMC55459
Analysis of intergenic spacer transcripts suggests ‘read-around’ transcription of the extrachromosomal circular rDNA in Euglena gracilis
Spencer J. Greenwood, Murray N. Schnare, James R. Cook, and Michael W. Gray
Nucleic Acids Res. 2001 May 15; 29(10): 2191–2198.
PMCID: PMC55454
Efficient new ribozyme mimics: direct mapping of molecular design principles from small molecules to macromolecular, biomimetic catalysts
William C. Putnam, Andrew T. Daniher, Bobby N. Trawick, and James K. Bashkin
Nucleic Acids Res. 2001 May 15; 29(10): 2199–2204.
PMCID: PMC55460
NAR Methods Online
Gene expression profiling using a novel method: amplified differential gene expression (ADGE)
Zhijian J. Chen, Hongxie Shen, and Kenneth D. Tew
Nucleic Acids Res. 2001 May 15; 29(10): e46.
PMCID: PMC55467
New variants of inducible Cre recombinase: a novel mutant of Cre–PR fusion protein exhibits enhanced sensitivity and an expanded range of inducibility
Frank T. Wunderlich, Hendrik Wildner, Klaus Rajewsky, and Frank Edenhofer
Nucleic Acids Res. 2001 May 15; 29(10): e47.
PMCID: PMC55468
Octamer-primed sequencing technology: effects of dNTP supplementation
A. I. Kraltcheva and S. H. Hardin
Nucleic Acids Res. 2001 May 15; 29(10): e48.
PMCID: PMC55469
Identification of the mass-silent post-transcriptionally modified nucleoside pseudouridine in RNA by matrix-assisted laser desorption/ionization mass spectrometry
K. G. Patteson, Lenore Polo Rodicio, and Patrick A. Limbach
Nucleic Acids Res. 2001 May 15; 29(10): e49.
PMCID: PMC55470
The rational design of a ‘type 88’ genetically stable peptide display vector in the filamentous bacteriophage fd
David Enshell-Seijffers, Larisa Smelyanski, and Jonathan M. Gershoni
Nucleic Acids Res. 2001 May 15; 29(10): e50.
PMCID: PMC55471
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