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Volume 6(12);  December 2000
Research Articles
The case for the involvement of the Upf3p in programmed -1 ribosomal frameshifting.
J Dinman, M Ruiz-Echevarria, W Wang, and S Peltz
RNA. 2000 December; 6(12): 1685–1686.
PMCID: PMC1370036
The case against the involvement of the NMD proteins in programmed frameshifting.
G Stahl, L Bidou, I Hatin, O Namy, J P Rousset, and P Farabaugh
RNA. 2000 December; 6(12): 1687–1688.
PMCID: PMC1370037
Varieties of RNase P: a nomenclature problem?
S Altman, V Gopalan, and A Vioque
RNA. 2000 December; 6(12): 1689–1694.
PMCID: PMC1370038
Enzyme nomenclature: functional or structural?
P Gegenheimer
RNA. 2000 December; 6(12): 1695–1697.
PMCID: PMC1370039
The final step in the formation of 25S rRNA in Saccharomyces cerevisiae is performed by 5'-->3' exonucleases.
T H Geerlings, J C Vos, and H A Raué
RNA. 2000 December; 6(12): 1698–1703.
PMCID: PMC1370040
The ribosomal binding and peptidyl-tRNA hydrolysis functions of Escherichia coli release factor 2 are linked through residue 246.
D N Wilson, D Guévremont, and W P Tate
RNA. 2000 December; 6(12): 1704–1713.
PMCID: PMC1370041
Magnesium ions mediate contacts between phosphoryl oxygens at positions 2122 and 2176 of the 23S rRNA and ribosomal protein L1.
D Drygin and R A Zimmermann
RNA. 2000 December; 6(12): 1714–1726.
PMCID: PMC1370042
Nucleotides of 18S rRNA surrounding mRNA codons at the human ribosomal A, P, and E sites: a crosslinking study with mRNA analogs carrying an aryl azide group at either the uracil or the guanine residue.
N Demeshkina, M Repkova, A Ven'yaminova, D Graifer, and G Karpova
RNA. 2000 December; 6(12): 1727–1736.
PMCID: PMC1370043
Pre-mRNA processing factors are required for nuclear export.
A S Brodsky and P A Silver
RNA. 2000 December; 6(12): 1737–1749.
PMCID: PMC1370044
Dynamics and three-dimensional localization of ribosomal RNA within the nucleolus.
M Thiry, T Cheutin, M F O'Donohue, H Kaplan, and D Ploton
RNA. 2000 December; 6(12): 1750–1761.
PMCID: PMC1370045
The mRNA export in Caenorhabditis elegans is mediated by Ce-NXF-1, an ortholog of human TAP/NXF and Saccharomyces cerevisiae Mex67p.
W Tan, A S Zolotukhin, J Bear, D J Patenaude, and B K Felber
RNA. 2000 December; 6(12): 1762–1772.
PMCID: PMC1370046
The odyssey of a regulated transcript.
J Vilardell, P Chartrand, R H Singer, and J R Warner
RNA. 2000 December; 6(12): 1773–1780.
PMCID: PMC1370047
Picornavirus IRESes and the poly(A) tail jointly promote cap-independent translation in a mammalian cell-free system.
G Bergamini, T Preiss, and M W Hentze
RNA. 2000 December; 6(12): 1781–1790.
PMCID: PMC1370048
Ribosomal binding to the internal ribosomal entry site of classical swine fever virus.
V G Kolupaeva, T V Pestova, and C U Hellen
RNA. 2000 December; 6(12): 1791–1807.
PMCID: PMC1370049
Structure and function of a cap-independent translation element that functions in either the 3' or the 5' untranslated region.
L Guo, E Allen, and W A Miller
RNA. 2000 December; 6(12): 1808–1820.
PMCID: PMC1370050
Structure of the ribozyme substrate hairpin of Neurospora VS RNA: a close look at the cleavage site.
P J Michiels, C H Schouten, C W Hilbers, and H A Heus
RNA. 2000 December; 6(12): 1821–1832.
PMCID: PMC1370051
The folding of the hairpin ribozyme: dependence on the loops and the junction.
Z Y Zhao, T J Wilson, K Maxwell, and D M Lilley
RNA. 2000 December; 6(12): 1833–1846.
PMCID: PMC1370052
SR proteins Asf/SF2 and 9G8 interact to activate enhancer-dependent intron D splicing of bovine growth hormone pre-mRNA in vitro.
X Li, M E Shambaugh, F M Rottman, and J A Bokar
RNA. 2000 December; 6(12): 1847–1858.
PMCID: PMC1370053
Disruption of the 5' stem-loop of yeast U6 RNA induces trimethylguanosine capping of this RNA polymerase III transcript in vivo.
S Kwan, V L Gerlach, and D A Brow
RNA. 2000 December; 6(12): 1859–1869.
PMCID: PMC1370054
Deletion of the Escherichia coli pseudouridine synthase gene truB blocks formation of pseudouridine 55 in tRNA in vivo, does not affect exponential growth, but confers a strong selective disadvantage in competition with wild-type cells.
N Gutgsell, N Englund, L Niu, Y Kaya, B G Lane, and J Ofengand
RNA. 2000 December; 6(12): 1870–1881.
PMCID: PMC1370055
The bI4 group I intron binds directly to both its protein splicing partners, a tRNA synthetase and maturase, to facilitate RNA splicing activity.
S B Rho and S A Martinis
RNA. 2000 December; 6(12): 1882–1894.
PMCID: PMC1370056
Phylogenetic-comparative analysis of the eukaryal ribonuclease P RNA.
D N Frank, C Adamidi, M A Ehringer, C Pitulle, and N R Pace
RNA. 2000 December; 6(12): 1895–1904.
PMCID: PMC1370057
Nuclease protection of RNAs containing site-specific labels: a rapid method for mapping RNA-protein interactions.
P A Maroney, C M Romfo, and T W Nilsen
RNA. 2000 December; 6(12): 1905–1909.
PMCID: PMC1370058
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