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Volume 14(1);  January 10, 1986
The cover of the journal
The GenBank genetic sequence databank.
H S Bilofsky, C Burks, J W Fickett, W B Goad, F I Lewitter, W P Rindone, C D Swindell, and C S Tung
Nucleic Acids Res. 1986 January 10; 14(1): 1–4.
PMCID: PMC339347
The EMBL data library.
G H Hamm and G N Cameron
Nucleic Acids Res. 1986 January 10; 14(1): 5–9.
PMCID: PMC339348
The protein identification resource (PIR).
D G George, W C Barker, and L T Hunt
Nucleic Acids Res. 1986 January 10; 14(1): 11–15.
PMCID: PMC339349
BIONET: national computer resource for molecular biology.
D H Smith, D Brutlag, P Friedland, and L H Kedes
Nucleic Acids Res. 1986 January 10; 14(1): 17–20.
PMCID: PMC339350
PROPHET, a national computing resource for life science research.
Nucleic Acids Res. 1986 January 10; 14(1): 21–24.
PMCID: PMC339351
The molecular biology computer research resource.
T F Smith, K Gruskin, S Tolman, and D Faulkner
Nucleic Acids Res. 1986 January 10; 14(1): 25–29.
PMCID: PMC339352
An efficient string matching algorithm with k differences for nucleotide and amino acid sequences.
G M Landau, U Vishkin, and R Nussinov
Nucleic Acids Res. 1986 January 10; 14(1): 31–46.
PMCID: PMC339353
Development of a superior strategy for computer-assisted nucleotide sequence analysis.
L Burnett
Nucleic Acids Res. 1986 January 10; 14(1): 47–55.
PMCID: PMC339354
Sequence search on a supercomputer.
O Gotoh and Y Tagashira
Nucleic Acids Res. 1986 January 10; 14(1): 57–64.
PMCID: PMC339355
Automated preparation of DNA sequences for publication.
M B Shapiro and P Senapathy
Nucleic Acids Res. 1986 January 10; 14(1): 65–73.
PMCID: PMC339356
A sequence analysis system encompassing rules for DNA helical distortion.
B A Shapiro, R Nussinov, L E Lipkin, and J V Maizel, Jr
Nucleic Acids Res. 1986 January 10; 14(1): 75–86.
PMCID: PMC339357
GEL--a computer tool for DNA sequencing projects.
R A Grymes, P Travers, and A Engelberg
Nucleic Acids Res. 1986 January 10; 14(1): 87–98.
PMCID: PMC339358
Algorithms for the search of amino acid patterns in nucleic acid sequences.
H Peltola, H Söderlund, and E Ukkonen
Nucleic Acids Res. 1986 January 10; 14(1): 99–107.
PMCID: PMC339359
Analysis of the occurrence of promoter-sites in DNA.
M E Mulligan and W R McClure
Nucleic Acids Res. 1986 January 10; 14(1): 109–126.
PMCID: PMC339360
Probability of coding of a DNA sequence: an algorithm to predict translated reading frames from their thermodynamic characteristics.
A Tramontano and M F Macchiato
Nucleic Acids Res. 1986 January 10; 14(1): 127–135.
PMCID: PMC339361
A peptide to DNA conversion program.
J A van den Berg and M Osinga
Nucleic Acids Res. 1986 January 10; 14(1): 137–140.
PMCID: PMC339362
Sequence landscapes.
B Clift, D Haussler, R McConnell, T D Schneider, and G D Stormo
Nucleic Acids Res. 1986 January 10; 14(1): 141–158.
PMCID: PMC339363
MULTAN: a program to align multiple DNA sequences.
W Bains
Nucleic Acids Res. 1986 January 10; 14(1): 159–177.
PMCID: PMC339364
Heuristic informational analysis of sequences.
J M Claverie and L Bougueleret
Nucleic Acids Res. 1986 January 10; 14(1): 179–196.
PMCID: PMC339368
Principle of codification for quick comparisons with the entire biomolecule databanks and associated programs in FORTRAN 77.
C Fondrat, P Dessen, and P Le Beux
Nucleic Acids Res. 1986 January 10; 14(1): 197–204.
PMCID: PMC339374
Data structures for DNA sequence manipulation.
C B Lawrence
Nucleic Acids Res. 1986 January 10; 14(1): 205–216.
PMCID: PMC339377
The current status and portability of our sequence handling software.
R Staden
Nucleic Acids Res. 1986 January 10; 14(1): 217–231.
PMCID: PMC339382
The MTX package of computer programmes for the comparison of sequences of nucleotides and amino acid residues.
A H Reisner and C A Bucholtz
Nucleic Acids Res. 1986 January 10; 14(1): 233–238.
PMCID: PMC339387
A comprehensive package for DNA sequence analysis in FORTRAN IV for the PDP-11.
J Arnold, V K Eckenrode, K Lemke, G J Phillips, and S W Schaeffer
Nucleic Acids Res. 1986 January 10; 14(1): 239–254.
PMCID: PMC339390
Methylation blockage and other improvements to a comprehensive DNA analysis program.
T W Stone and K N Potter
Nucleic Acids Res. 1986 January 10; 14(1): 255–264.
PMCID: PMC339394
MBIS--an integrated system for the retrieval and analyses of sequence data from nucleic acids and proteins.
C A Bucholtz and A H Reisner
Nucleic Acids Res. 1986 January 10; 14(1): 265–272.
PMCID: PMC339398
GENEUS, a computer system for DNA and protein sequence analysis containing an information retrieval system for the EMBL data library.
R Harr, P Fällman, M Häggström, L Wahlström, and P Gustafsson
Nucleic Acids Res. 1986 January 10; 14(1): 273–284.
PMCID: PMC339401
Cloning simulation in the cage environment.
R J Douthart, J J Thomas, S D Rosier, J E Schmaltz, and J W West
Nucleic Acids Res. 1986 January 10; 14(1): 285–297.
PMCID: PMC339405
A dynamic programming algorithm for finding alternative RNA secondary structures.
A L Williams, Jr and I Tinoco, Jr
Nucleic Acids Res. 1986 January 10; 14(1): 299–315.
PMCID: PMC339410
Nucleic acid secondary structure prediction and display.
K Stüber
Nucleic Acids Res. 1986 January 10; 14(1): 317–326.
PMCID: PMC339415
PEPPLOT, a protein secondary structure analysis program for the UWGCG sequence analysis software package.
M Gribskov, R R Burgess, and J Devereux
Nucleic Acids Res. 1986 January 10; 14(1): 327–334.
PMCID: PMC339416
A computer program package for restriction map analysis and manipulation.
G Zehetner and H Lehrach
Nucleic Acids Res. 1986 January 10; 14(1): 335–349.
PMCID: PMC339417
A program package applicable to the detection of overlaps between restriction maps.
P S Neumaier
Nucleic Acids Res. 1986 January 10; 14(1): 351–362.
PMCID: PMC339418
A multiple sequence alignment program.
E Sobel and H M Martinez
Nucleic Acids Res. 1986 January 10; 14(1): 363–374.
PMCID: PMC339419
A statistical method for correlating tRNA sequence with amino acid specificity.
T Atilgan, H B Nicholas, Jr, and W H McClain
Nucleic Acids Res. 1986 January 10; 14(1): 375–380.
PMCID: PMC339420
Computer graphics program to reveal the dependence of the gross three-dimensional structure of the B-DNA double helix on primary structure.
C S Tung and S C Harvey
Nucleic Acids Res. 1986 January 10; 14(1): 381–387.
PMCID: PMC339421
Relation between genomic and capsid structures in RNA viruses.
K Yamamoto and H Yoshikura
Nucleic Acids Res. 1986 January 10; 14(1): 389–396.
PMCID: PMC339422
GENEVIEW and the DNACE data bus: computational tools for analysis, display and exchange of genetic information.
J L Modelevsky, F Norris, and G Griesinger
Nucleic Acids Res. 1986 January 10; 14(1): 397–403.
PMCID: PMC339423
Computer management of oligonucleotide synthesis on cellulose filters.
C M Tolstoshev, H W Matthes, and P Oudet
Nucleic Acids Res. 1986 January 10; 14(1): 405–415.
PMCID: PMC339424
Automatic reading of DNA sequencing gel autoradiographs using a large format digital scanner.
J K Elder, D K Green, and E M Southern
Nucleic Acids Res. 1986 January 10; 14(1): 417–424.
PMCID: PMC339425
Should nucleotide sequence analyzing computer algorithms always extend homologies by extending homologies?
L Burnett, A Basten, and W J Hensley
Nucleic Acids Res. 1986 January 10; 14(1): 425–430.
PMCID: PMC339426
A program for the identification of tRNA-like structures in DNA sequence data.
C C Marvel
Nucleic Acids Res. 1986 January 10; 14(1): 431–435.
PMCID: PMC339427
A computer program for translating DNA sequences into protein.
P Taylor
Nucleic Acids Res. 1986 January 10; 14(1): 437–441.
PMCID: PMC339428
Improved programs for DNA and protein sequence analysis on the IBM personal computer and other standard computer systems.
D W Mount and B Conrad
Nucleic Acids Res. 1986 January 10; 14(1): 443–454.
PMCID: PMC339429
A collection of programs for nucleic acid and protein analysis, written in FORTRAN 77 for IBM-PC compatible microcomputers.
B F Lang and G Burger
Nucleic Acids Res. 1986 January 10; 14(1): 455–465.
PMCID: PMC339430
A general DNA analysis program for the Hewlett-Packard Model 86/87 microcomputer.
E H Harley
Nucleic Acids Res. 1986 January 10; 14(1): 467–477.
PMCID: PMC339431
A convenient and adaptable microcomputer environment for DNA and protein sequence manipulation and analysis.
J Pustell and F C Kafatos
Nucleic Acids Res. 1986 January 10; 14(1): 479–488.
PMCID: PMC339432
Computer assisted microdensitometric analysis of footprinting autoradiographic DATA.
J C Dabrowiak, A Skorobogaty, N Rich, C P Vary, and J N Vournakis
Nucleic Acids Res. 1986 January 10; 14(1): 489–499.
PMCID: PMC339433
Computer program for the IBM personal computer which searches for approximate matches to short oligonucleotide sequences in long target DNA sequences.
E W Myers and D W Mount
Nucleic Acids Res. 1986 January 10; 14(1): 501–508.
PMCID: PMC339434
A new method of representing DNA sequences which combines ease of visual analysis with machine readability.
J E Cowin, C H Jellis, and D Rickwood
Nucleic Acids Res. 1986 January 10; 14(1): 509–515.
PMCID: PMC339435
Assembly of overlapping DNA sequences by a program written in BASIC for 64K CP/M and MS-DOS IBM-compatible microcomputers.
R E Johnston, J M Mackenzie, Jr, and W G Dougherty
Nucleic Acids Res. 1986 January 10; 14(1): 517–527.
PMCID: PMC339436
DIGICALC: a restriction fragment analysis program.
A MacMurray
Nucleic Acids Res. 1986 January 10; 14(1): 529–536.
PMCID: PMC339437
A computer program for comparative analysis of nucleic acid sequences.
P A Blanz and S Kleindienst
Nucleic Acids Res. 1986 January 10; 14(1): 537–541.
PMCID: PMC339438
DNA sequence analysis: a procedure to find homologies among many sequences.
G Krishnan, R K Kaul, and P Jagadeeswaran
Nucleic Acids Res. 1986 January 10; 14(1): 543–550.
PMCID: PMC339439
An algorithm for studying cooperative transitions in DNA.
H Marcaud, J Gabarro-Arpa, R Ehrlich, and C Reiss
Nucleic Acids Res. 1986 January 10; 14(1): 551–558.
PMCID: PMC339440
COMAP: a comigrating analysis program for estimating the relationship of adenoviruses on the genome level.
T Adrian and W Heinrich
Nucleic Acids Res. 1986 January 10; 14(1): 559–565.
PMCID: PMC339441
PROBFIND: a computer program for selecting oligonucleotide probes from peptide sequences.
R M Lewis
Nucleic Acids Res. 1986 January 10; 14(1): 567–570.
PMCID: PMC339442
An integrated software system for microcomputer management of recombinant DNA data.
J Campione-Piccardo and M Ruben
Nucleic Acids Res. 1986 January 10; 14(1): 571–574.
PMCID: PMC339443
SPLINT: a cubic spline interpolation program for the analysis of fragment sizes in one-dimensional electrophoresis gels.
C E Gariepy, M I Lomax, and L I Grossman
Nucleic Acids Res. 1986 January 10; 14(1): 575–581.
PMCID: PMC339444
Fast analysis of DNA and protein sequence on Apple IIe: restriction sites search, alignment of short sequence and dot matrix analysis.
C Marck
Nucleic Acids Res. 1986 January 10; 14(1): 583–590.
PMCID: PMC339445
A DNA sequence analysis program for the Apple Macintosh.
R H Gross
Nucleic Acids Res. 1986 January 10; 14(1): 591–596.
PMCID: PMC339446
Improving the efficiency of dot-matrix similarity searches through use of an oligomer table.
B Fristensky
Nucleic Acids Res. 1986 January 10; 14(1): 597–610.
PMCID: PMC339447
Personal access to sequence databases on personal computers.
P E Doggett and F R Blattner
Nucleic Acids Res. 1986 January 10; 14(1): 611–619.
PMCID: PMC339448
PREFACE
Richard J. Roberts and Dieter Söll
Nucleic Acids Res. 1986 January 10; 14(1): nil25.
PMCID: PMC339346
Journal Matter
Original table of contents page
Administrative content — journal masthead, notices, indexes, etc.
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