| | Articles The estimation of statistical
parameters for local alignment score distributions Stephen F. Altschul, Ralf Bundschuh, Rolf Olsen, and Terence Hwa PMCID: PMC29669 Analysis of the Xenopus
laevis CCAAT-enhancer binding protein α gene
promoter demonstrates species-specific differences in the mechanisms
for both auto-activation and regulation by Sp1 Feray Tura Kockar, Pelagia Foka, Timothy
R. Hughes, Stavroula Kousteni, and Dipak
P. Ramji PMCID: PMC29673 Polarity of human replication
protein A binding to DNA Dmitry M. Kolpashchikov, Svetlana
N. Khodyreva, Denis
Yu. Khlimankov, Marc S. Wold, Alain Favre, and Olga I. Lavrik PMCID: PMC29666 Conserved regulatory elements
of the promoter sequence of the gene rpoH of enteric
bacteria Jesús Ramírez-Santos, Julio Collado-Vides, Martin García-Varela, and M. Carmen Gómez-Eichelmann PMCID: PMC29668 Characterization of Schizosaccharomyces
pombe RNA triphosphatase Yi Pei, Beate Schwer, Stéphane Hausmann, and Stewart Shuman PMCID: PMC29678 The transcriptional program of
a human B cell line in response to Myc Marino Schuhmacher, Franz Kohlhuber, Michael Hölzel, Carmen Kaiser, Helmut Burtscher, Michael Jarsch, Georg W. Bornkamm, Gerhard Laux, Axel Polack, Ulrich
H. Weidle, and Dirk Eick PMCID: PMC29676 Enzymatic processing of DNA containing
tandem dihydrouracil by endonucleases III and VIII Radhika Venkhataraman, Carlton D. Donald, Robindra Roy, Ho Jin You, Paul W. Doetsch, and Yoke
W. Kow PMCID: PMC29670 Effect of 2′-O-methyl antisense ORNs on expression of thymidylate
synthase in human colon cancer RKO cells John C. Schmitz, Dong Yu, Sudhir Agrawal, and Edward Chu PMCID: PMC29681 The transcript release factor
PTRF augments ribosomal gene transcription by facilitating reinitiation
of RNA polymerase I Petr Jansa, Christof Burek, Eva
E. Sander, and Ingrid Grummt PMCID: PMC29675 Stimulation of human 8-oxoguanine-DNA
glycosylase by AP-endonuclease: potential coordination of the initial
steps in base excision repair Jeff W. Hill, Tapas
K. Hazra, Tadahide Izumi, and Sankar Mitra PMCID: PMC29662 Structure of human DNMT2, an
enigmatic DNA methyltransferase homolog that displays
denaturant-resistant binding to DNA Aiping Dong, Jeffrey
A. Yoder, Xing Zhang, Lan Zhou, Timothy
H. Bestor, and Xiaodong Cheng PMCID: PMC29660 Human MTH1 protein hydrolyzes
the oxidized ribonucleotide, 2-hydroxy-ATP Katsuyoshi Fujikawa, Hiroyuki Kamiya, Hiroyuki Yakushiji, Yusaku Nakabeppu, and Hiroshi Kasai PMCID: PMC29672 TectoRNA: modular assembly units
for the construction of RNA nano-objects Luc Jaeger, Eric Westhof, and Neocles
B. Leontis PMCID: PMC29663 Conserved stem–loop
structures in the HIV-1 RNA region containing the A3 3′ splice
site and its cis-regulatory element: possible involvement in
RNA splicing Sandrine Jacquenet, Delphine Ropers, Patricia
S. Bilodeau, Laurence Damier, Annie Mougin, C.
Martin Stoltzfus, and Christiane Branlant PMCID: PMC29680 DNA-bound transcription factor
complexes analysed by mass-spectrometry: binding of novel proteins
to the human c-fos SRE and related sequences Victoria Drewett, Henrik Molina, Alan Millar, Silke Muller, Friedrich
von Hesler, and Peter E. Shaw PMCID: PMC29679 Cis-acting requirements
in flanking DNA for the programmed elimination of mse2.9: a common mechanism
for deletion of internal eliminated sequences from the developing
macronucleus of Tetrahymena thermophila Jeffrey S. Fillingham, Deanna Bruno, and Ronald
E. Pearlman PMCID: PMC29677 Solution structure and dynamics
of GCN4 cognate DNA: NMR investigations Purnima Khandelwal, S.
C. Panchal, P.
K. Radha, and R.
V. Hosur PMCID: PMC29655 DNA binding sites for the Mlc
and NagC proteins: regulation of nagE, encoding
the N-acetylglucosamine-specific transporter in Escherichia coli Jacqueline Plumbridge PMCID: PMC29661 Antagonistic action of Six3 and
Prox1 at the γ-crystallin promoter Johannes Lengler, Eberhard Krausz, Stanislav Tomarev, Alan Prescott, Roy A. Quinlan, and Jochen Graw PMCID: PMC29665 Highly conserved features of
DNA binding between two divergent members of the Myb family of transcription factors Benoît Pinson, Elen
M. Brendeford, Odd
S. Gabrielsen, and Bertrand Daignan-Fornier PMCID: PMC29659 Cnr interferes with dimerization
of the replication protein α in phage-plasmid
P4 Arianna Tocchetti, Stefania Serina, Ilaria Oliva, Gianni Dehò, and Daniela Ghisotti PMCID: PMC29674 A phylogenomic approach to microbial
evolution Thomas Sicheritz-Pontén and Siv
G. E. Andersson PMCID: PMC29656 Efficient recognition of substrates
and substrate analogs by the adenine glycosylase MutY requires the
C-terminal domain Nikolas H. Chmiel, Marie-Pierre Golinelli, Anthony
W. Francis, and Sheila
S. David PMCID: PMC29658 Unwinding of nucleic acids by
HCV NS3 helicase is sensitive to the structure of the duplex Alan J. Tackett, Lai Wei, Craig E. Cameron, and Kevin D. Raney PMCID: PMC29657 Target DNA chromatinization modulates
nicking by L1 endonuclease Gregory J. Cost, Amit Golding, Mark
S. Schlissel, and Jef
D. Boeke PMCID: PMC29664 RNA-templated DNA ligation for
transcript analysis Mats Nilsson, Dan-Oscar Antson, Gisela Barbany, and Ulf Landegren PMCID: PMC29667 Assessment of clone identity
and sequence fidelity for 1189 IMAGE cDNA clones Robert G. Halgren, Mark
R. Fielden, Cora
J. Fong, and Timothy
R. Zacharewski PMCID: PMC29671 NAR Methods Online Synthesis of mitochondrial DNA
in permeabilised human cultured cells Clare Freeman Emmerson, G.
K. Brown, and J. Poulton PMCID: PMC29682 Chemical nanoprinting: a novel
method for fabricating DNA microchips Anil Kumar and Zicai Liang PMCID: PMC29683 Telomeric repeat amplification,
without shortening or lengthening of the telomerase products: a
method to analyze the processivity of telomerase enzyme Istvan Szatmari and Janos Aradi PMCID: PMC29684 Sephadex-binding RNA ligands:
rapid affinity purification of RNA from complex RNA mixtures Chatchawan Srisawat, Irwin
J. Goldstein, and David
R. Engelke PMCID: PMC29685 Inducible expression of exogenous
genes in Dictyostelium discoideum using the ribonucleotide reductase
promoter Pascale Gaudet, Harry MacWilliams, and Adrian Tsang PMCID: PMC29686 Efficient construction of long
DNA duplexes with internal non-Watson–Crick motifs and
modifications Xiaofeng Zheng and Philip
C. Bevilacqua PMCID: PMC29687 RNA analysis by ion-pair reversed-phase
high performance liquid chromatography Arezou Azarani and Karl
H. Hecker PMCID: PMC29688 Isolation of segments of homologous
genes with only one conserved amino acid region via PCR Martin Laging, Berthold Fartmann, and Wilfried Kramer PMCID: PMC29689 |
