| | Research Articles Towards mixed sequence recognition by triple helix formation. D M Gowers and K R Fox Nucleic Acids Res. 1999 April 1; 27(7): 1569–1577. PMCID: PMC148358 mRNAs have greater negative folding free energies than shuffled or codon choice randomized sequences. W Seffens and D Digby Nucleic Acids Res. 1999 April 1; 27(7): 1578–1584. PMCID: PMC148359 Kinetic selection of HPV 16 E6/E7-directed antisense nucleic acids: anti-proliferative effects on HPV 16-transformed cells. F Venturini, J Braspenning, M Homann, L Gissmann, and G Sczakiel Nucleic Acids Res. 1999 April 1; 27(7): 1585–1592. PMCID: PMC148360 Structure of the oligonucleotide d(CGTATATACG) as a site-specific complex with nickel ions. N G Abrescia, L Malinina, L G Fernandez, T Huynh-Dinh, S Neidle, and J A Subirana Nucleic Acids Res. 1999 April 1; 27(7): 1593–1599. PMCID: PMC148361 Initiation of DNA replication at the Chinese hamster origin oriGNAI3 relies on local sequences and/or chromatin structures, but not on transcription of the nearby GNAI3 gene. F Toledo, A M Lachagès, V Mayau, and M Debatisse Nucleic Acids Res. 1999 April 1; 27(7): 1600–1608. PMCID: PMC148362 DNA polymerase beta-like nucleotidyltransferase superfamily: identification of three new families, classification and evolutionary history. L Aravind and E V Koonin Nucleic Acids Res. 1999 April 1; 27(7): 1609–1618. PMCID: PMC148363 DNA minor groove recognition by bis-benzimidazole analogues of Hoechst 33258: insights into structure-DNA affinity relationships assessed by fluorescence titration measurements. C E Bostock-Smith and M S Searle Nucleic Acids Res. 1999 April 1; 27(7): 1619–1624. PMCID: PMC148364 Heavy de novo methylation at symmetrical and non-symmetrical sites is a hallmark of RNA-directed DNA methylation. T Pélissier, S Thalmeir, D Kempe, H L Sänger, and M Wassenegger Nucleic Acids Res. 1999 April 1; 27(7): 1625–1634. PMCID: PMC148365 Orientation and positional mapping of the subunits of the multicomponent transcription factors RFX and X2BP to the major histocompatibility complex class II transcriptional enhancer. S D Westerheide and J M Boss Nucleic Acids Res. 1999 April 1; 27(7): 1635–1641. PMCID: PMC148366 Proteome composition and codon usage in spirochaetes: species-specific and DNA strand-specific mutational biases. B Lafay, A T Lloyd, M J McLean, K M Devine, P M Sharp, and K H Wolfe Nucleic Acids Res. 1999 April 1; 27(7): 1642–1649. PMCID: PMC148367 Trans-activation of the Tetrahymena group I intron ribozyme via a non-native RNA-RNA interaction. Y Ikawa, H Shiraishi, and T Inoue Nucleic Acids Res. 1999 April 1; 27(7): 1650–1655. PMCID: PMC148368 The repressor which binds the -75 GATA motif of the GPB promoter contains Ku70 as the DNA binding subunit. V Camara-Clayette, D Thomas, C Rahuel, R Barbey, J P Cartron, and O Bertrand Nucleic Acids Res. 1999 April 1; 27(7): 1656–1663. PMCID: PMC148369 An AU-rich sequence in the 3'-UTR of plasminogen activator inhibitor type 2 (PAI-2) mRNA promotes PAI-2 mRNA decay and provides a binding site for nuclear HuR. F Maurer, M Tierney, and R L Medcalf Nucleic Acids Res. 1999 April 1; 27(7): 1664–1673. PMCID: PMC148370 Long-term stability of large insert genomic DNA episomal shuttle vectors in human cells. R Wade-Martins, J Frampton, and M R James Nucleic Acids Res. 1999 April 1; 27(7): 1674–1682. PMCID: PMC148371 The presence of pseudouridine in the anticodon alters the genetic code: a possible mechanism for assignment of the AAA lysine codon as asparagine in echinoderm mitochondria. K Tomita, T Ueda, and K Watanabe Nucleic Acids Res. 1999 April 1; 27(7): 1683–1689. PMCID: PMC148372 Identification, cloning and expression of p25, an AT-rich DNA-binding protein from the extreme thermophile, Thermus aquaticus YT-1. X Du and J J Pène Nucleic Acids Res. 1999 April 1; 27(7): 1690–1697. PMCID: PMC148373 Design, characterization and testing of tRNA3Lys-based hammerhead ribozymes. M F Medina and S Joshi Nucleic Acids Res. 1999 April 1; 27(7): 1698–1708. PMCID: PMC148374 Plant cell-directed control of virion sense gene expression in wheat dwarf virus. P S Gooding, N P Batty, A P Goldsbrough, and P M Mullineaux Nucleic Acids Res. 1999 April 1; 27(7): 1709–1718. PMCID: PMC148375 DNA hybridization on microparticles: determining capture-probe density and equilibrium dissociation constants. P Wilkins Stevens, M R Henry, and D M Kelso Nucleic Acids Res. 1999 April 1; 27(7): 1719–1727. PMCID: PMC148376 Crystal structure of a 14 bp RNA duplex with non-symmetrical tandem GxU wobble base pairs. J Trikha, D J Filman, and J M Hogle Nucleic Acids Res. 1999 April 1; 27(7): 1728–1739. PMCID: PMC148377 Identification of a novel transcriptional activity of mammalian Id proteins. M A Bounpheng, I N Melnikova, J J Dimas, and B A Christy Nucleic Acids Res. 1999 April 1; 27(7): 1740–1746. PMCID: PMC148378 The mouse Y-box protein, MSY2, is associated with a kinase on non-polysomal mouse testicular mRNAs. T P Herbert and N B Hecht Nucleic Acids Res. 1999 April 1; 27(7): 1747–1753. PMCID: PMC148379 Molecular gene organisation and secondary structure of the mitochondrial large subunit ribosomal RNA from the cultivated Basidiomycota Agrocybe aegerita: a 13 kb gene possessing six unusual nucleotide extensions and eight introns. P Gonzalez, G Barroso, and J Labarère Nucleic Acids Res. 1999 April 1; 27(7): 1754–1761. PMCID: PMC148380 An improved method for routine preparation of intact artificial chromosome DNA (340-1000 kb) for transfection into human cells. S T Compton, K A Henning, M Chen, M K Mansoura, and M A Ashlock Nucleic Acids Res. 1999 April 1; 27(7): 1762–1765. PMCID: PMC148381 |