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Volume 27(5);  March 1, 1999
Research Articles
Conserved domains in DNA repair proteins and evolution of repair systems.
L Aravind, D R Walker, and E V Koonin
Nucleic Acids Res. 1999 March 1; 27(5): 1223–1242.
PMCID: PMC148307
The evolutionary scrambling and developmental unscrambling of germline genes in hypotrichous ciliates.
D M Prescott
Nucleic Acids Res. 1999 March 1; 27(5): 1243–1250.
PMCID: PMC148308
FBI-1, a factor that binds to the HIV-1 inducer of short transcripts (IST), is a POZ domain protein.
D J Morrison, P S Pendergrast, P Stavropoulos, S U Colmenares, R Kobayashi, and N Hernandez
Nucleic Acids Res. 1999 March 1; 27(5): 1251–1262.
PMCID: PMC148309
A gene encoding an intestinal-enriched member of the Krüppel-like factor family expressed in intestinal epithelial cells.
M D Conkright, M A Wani, K P Anderson, and J B Lingrel
Nucleic Acids Res. 1999 March 1; 27(5): 1263–1270.
PMCID: PMC148310
An allylic/acyclic adenosine nucleoside triphosphate for termination of DNA synthesis by DNA template-dependent polymerases.
C I Martinez, L H Thoresen, R A Gibbs, and K Burgess
Nucleic Acids Res. 1999 March 1; 27(5): 1271–1274.
PMCID: PMC148311
Escherichia coli RuvBL268S: a mutant RuvB protein that exhibits wild-type activities in vitro but confers a UV-sensitive ruv phenotype in vivo.
C Mézard, H George, A A Davies, A J van Gool, D Zerbib, A Stasiak, and S C West
Nucleic Acids Res. 1999 March 1; 27(5): 1275–1282.
PMCID: PMC148312
The exosome subunit Rrp43p is required for the efficient maturation of 5.8S, 18S and 25S rRNA.
N I Zanchin and D S Goldfarb
Nucleic Acids Res. 1999 March 1; 27(5): 1283–1288.
PMCID: PMC148313
A single point mutation in the yeast TRP4 gene affects efficiency of mRNA 3' end processing and alters selection of the poly(A) site.
K Düvel, C M Egli, and G H Braus
Nucleic Acids Res. 1999 March 1; 27(5): 1289–1295.
PMCID: PMC148314
Gene replacement with linear DNA in electroporated wild-type Escherichia coli.
M El Karoui, S K Amundsen, P Dabert, and A Gruss
Nucleic Acids Res. 1999 March 1; 27(5): 1296–1299.
PMCID: PMC148315
MicroSAGE: a modified procedure for serial analysis of gene expression in limited amounts of tissue.
N A Datson, J van der Perk-de Jong, M P van den Berg, E R de Kloet, and E Vreugdenhil
Nucleic Acids Res. 1999 March 1; 27(5): 1300–1307.
PMCID: PMC148316
Transfer RNA modification enzymes from Pyrococcus furiosus: detection of the enzymatic activities in vitro.
F Constantinesco, Y Motorin, and H Grosjean
Nucleic Acids Res. 1999 March 1; 27(5): 1308–1315.
PMCID: PMC148317
Novel non-isotopic detection of MutY enzyme-recognized mismatches in DNA via ultrasensitive detection of aldehydes.
G Maulik, S Botchway, S Chakrabarti, S Tetradis, B Price, and G M Makrigiorgos
Nucleic Acids Res. 1999 March 1; 27(5): 1316–1322.
PMCID: PMC148318
Targeted gene repair directed by the chimeric RNA/DNA oligonucleotide in a mammalian cell-free extract.
A Cole-Strauss, H Gamper, W K Holloman, M Muñoz, N Cheng, and E B Kmiec
Nucleic Acids Res. 1999 March 1; 27(5): 1323–1330.
PMCID: PMC148319
Cloning and characterization of the p42 subunit of mammalian translation initiation factor 3 (eIF3): demonstration that eIF3 interacts with eIF5 in mammalian cells.
A Bandyopadhyay and U Maitra
Nucleic Acids Res. 1999 March 1; 27(5): 1331–1337.
PMCID: PMC148320
Heat shock of HeLa cells inactivates a nuclear protein phosphatase specific for dephosphorylation of the C-terminal domain of RNA polymerase II.
M F Dubois, N F Marshall, V T Nguyen, G K Dahmus, F Bonnet, M E Dahmus, and O Bensaude
Nucleic Acids Res. 1999 March 1; 27(5): 1338–1344.
PMCID: PMC148321
Increased specificity of reverse transcription priming by trehalose and oligo-blockers allows high-efficiency window separation of mRNA display.
Y Mizuno, P Carninci, Y Okazaki, M Tateno, J Kawai, H Amanuma, M Muramatsu, and Y Hayashizaki
Nucleic Acids Res. 1999 March 1; 27(5): 1345–1349.
PMCID: PMC148322
Binding of the glucose-dependent Mig1p repressor to the GAL1 and GAL4 promoters in vivo: regulationby glucose and chromatin structure.
E Frolova, M Johnston, and J Majors
Nucleic Acids Res. 1999 March 1; 27(5): 1350–1358.
PMCID: PMC148323
The DNA-binding specificity of SOX9 and other SOX proteins.
S Mertin, S G McDowall, and V R Harley
Nucleic Acids Res. 1999 March 1; 27(5): 1359–1364.
PMCID: PMC148324
Repair of 8-oxoguanine in DNA is deficient in Cockayne syndrome group B cells.
G Dianov, C Bischoff, M Sunesen, and V A Bohr
Nucleic Acids Res. 1999 March 1; 27(5): 1365–1368.
PMCID: PMC148325
Probing the environment of nascent RNA in Escherichia coli transcription elongation complexes utilizing a new fluorescent ribonucleotide analog.
M M Hanna, E Yuriev, J Zhang, and D L Riggs
Nucleic Acids Res. 1999 March 1; 27(5): 1369–1376.
PMCID: PMC148326
Coordination of kRNA editing and polyadenylation in Trypanosoma brucei mitochondria: complete editing is not required for long poly(A) tract addition.
K T Militello and L K Read
Nucleic Acids Res. 1999 March 1; 27(5): 1377–1385.
PMCID: PMC148327
Mammalian polyadenylation sites: implications for differential display.
M R Frost and J A Guggenheim
Nucleic Acids Res. 1999 March 1; 27(5): 1386–1391.
PMCID: PMC148328
Structure of influenza virus panhandle RNA studied by NMR spectroscopy and molecular modeling.
H K Cheong, C Cheong, Y S Lee, B L Seong, and B S Choi
Nucleic Acids Res. 1999 March 1; 27(5): 1392–1397.
PMCID: PMC148329
Unusual nucleotide conformations in GNRA and UNCG type tetraloop hairpins: evidence from Raman markers assignments.
N Leulliot, V Baumruk, M Abdelkafi, P Y Turpin, A Namane, C Gouyette, T Huynh-Dinh, and M Ghomi
Nucleic Acids Res. 1999 March 1; 27(5): 1398–1404.
PMCID: PMC148330
Manganese citrate improves base-calling accuracy in DNA sequencing reactions using rhodamine-based fluorescent dye-terminators.
C Korch and H Drabkin
Nucleic Acids Res. 1999 March 1; 27(5): 1405–1407.
PMCID: PMC148331
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