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Volume 26(16);  August 15, 1998
Research Articles
Survey, analysis and genetic organization of genes encoding eukaryotic-like signaling proteins on a cyanobacterial genome.
C C Zhang, L Gonzalez, and V Phalip
Nucleic Acids Res. 1998 August 15; 26(16): 3619–3625.
PMCID: PMC147778
Triple helix formation at (AT)n adjacent to an oligopurine tract.
D M Gowers and K R Fox
Nucleic Acids Res. 1998 August 15; 26(16): 3626–3633.
PMCID: PMC147756
Trypanosoma brucei U insertion and U deletion activities co-purify with an enzymatic editing complex but are differentially optimized.
J Cruz-Reyes, L N Rusché, and B Sollner-Webb
Nucleic Acids Res. 1998 August 15; 26(16): 3634–3639.
PMCID: PMC147759
N 2-methylguanosine is iso-energetic with guanosine in RNA duplexes and GNRA tetraloops.
J P Rife, C S Cheng, P B Moore, and S A Strobel
Nucleic Acids Res. 1998 August 15; 26(16): 3640–3644.
PMCID: PMC147776
Characterization of Schizosaccharomyces pombe Rad2 protein, a FEN-1 homolog.
J L Alleva and P W Doetsch
Nucleic Acids Res. 1998 August 15; 26(16): 3645–3650.
PMCID: PMC147750
Telomere analysis by fluorescence in situ hybridization and flow cytometry.
M Hultdin, E Grönlund, K Norrback, E Eriksson-Lindström, T Just, and G Roos
Nucleic Acids Res. 1998 August 15; 26(16): 3651–3656.
PMCID: PMC147775
Assembly of MMTV promoter minichromosomes with positioned nucleosomes precludes NF1 access but not restriction enzyme cleavage.
P Venditti, L Di Croce, M Kauer, T Blank, P B Becker, and M Beato
Nucleic Acids Res. 1998 August 15; 26(16): 3657–3666.
PMCID: PMC147780
Mapping the RNA binding sites for human immunodeficiency virus type-1 gag and NC proteins within the complete HIV-1 and -2 untranslated leader regions.
C K Damgaard, H Dyhr-Mikkelsen, and J Kjems
Nucleic Acids Res. 1998 August 15; 26(16): 3667–3676.
PMCID: PMC147765
Comparison of the solution structures of intramolecular DNA triple helices containing adjacent and non-adjacent CG.C+ triplets.
J L Asensio, T Brown, and A N Lane
Nucleic Acids Res. 1998 August 15; 26(16): 3677–3686.
PMCID: PMC147772
The Himar1 mariner transposase cloned in a recombinant adenovirus vector is functional in mammalian cells.
L Zhang, U Sankar, D J Lampe, H M Robertson, and F L Graham
Nucleic Acids Res. 1998 August 15; 26(16): 3687–3693.
PMCID: PMC147766
Structural characteristics of 2'-O-(2-methoxyethyl)-modified nucleic acids from molecular dynamics simulations.
K E Lind, V Mohan, M Manoharan, and D M Ferguson
Nucleic Acids Res. 1998 August 15; 26(16): 3694–3799.
PMCID: PMC147782
Genetic analysis of prokaryotic and eukaryotic DNA-binding proteins in Escherichia coli.
F W Whipple
Nucleic Acids Res. 1998 August 15; 26(16): 3700–3706.
PMCID: PMC147751
Mutational analysis of exoribonuclease I from Saccharomyces cerevisiae.
A M Page, K Davis, C Molineux, R D Kolodner, and A W Johnson
Nucleic Acids Res. 1998 August 15; 26(16): 3707–3716.
PMCID: PMC147754
Interaction of structural modules in substrate binding by the ribozyme from Bacillus subtilis RNase P.
L Odell, V Huang, M Jakacka, and T Pan
Nucleic Acids Res. 1998 August 15; 26(16): 3717–3723.
PMCID: PMC147761
Fluorescent dyes specific for quadruplex DNA.
H Arthanari, S Basu, T L Kawano, and P H Bolton
Nucleic Acids Res. 1998 August 15; 26(16): 3724–3728.
PMCID: PMC147777
DNA synthesis on discontinuous templates by human DNA polymerases: implications for non-homologous DNA recombination.
L Islas, C F Fairley, and W F Morgan
Nucleic Acids Res. 1998 August 15; 26(16): 3729–3738.
PMCID: PMC147762
Direct interaction between Rsc6 and Rsc8/Swh3,two proteins that are conserved in SWI/SNF-related complexes.
I Treich, L Ho, and M Carlson
Nucleic Acids Res. 1998 August 15; 26(16): 3739–3745.
PMCID: PMC147781
Phosphoesterase domains associated with DNA polymerases of diverse origins.
L Aravind and E V Koonin
Nucleic Acids Res. 1998 August 15; 26(16): 3746–3752.
PMCID: PMC147763
The tRNA(guanine-26,N2-N2) methyltransferase (Trm1) from the hyperthermophilic archaeon Pyrococcus furiosus: cloning, sequencing of the gene and its expression in Escherichia coli.
F Constantinesco, N Benachenhou, Y Motorin, and H Grosjean
Nucleic Acids Res. 1998 August 15; 26(16): 3753–3761.
PMCID: PMC147764
Hex1: a new human Rad2 nuclease family member with homology to yeast exonuclease 1.
D M Wilson, 3rd, J P Carney, M A Coleman, A W Adamson, M Christensen, and J E Lamerdin
Nucleic Acids Res. 1998 August 15; 26(16): 3762–3768.
PMCID: PMC147753
V(D)J recombination intermediates and non-standard products in XRCC4-deficient cells.
J O Han, L A Erskine, M M Purugganan, T D Stamato, and D B Roth
Nucleic Acids Res. 1998 August 15; 26(16): 3769–3775.
PMCID: PMC147771
Cloning, chromosomal localization and promoter analysis of the human transcription factor YY1.
Y L Yao, B R Dupont, S Ghosh, Y Fang, R J Leach, and E Seto
Nucleic Acids Res. 1998 August 15; 26(16): 3776–3783.
PMCID: PMC147783
Targeting of CDK8 to a promoter-proximal RNA element demonstrates catalysis-dependent activation of gene expression.
M O Gold and A P Rice
Nucleic Acids Res. 1998 August 15; 26(16): 3784–3788.
PMCID: PMC147767
Probing DNA sequences in solution with a monomer-excimer fluorescence color change.
P L Paris, J M Langenhan, and E T Kool
Nucleic Acids Res. 1998 August 15; 26(16): 3789–3793.
PMCID: PMC147755
Divergent expression of alpha1-protease inhibitor genes in mouse and human.
J Tardiff and K S Krauter
Nucleic Acids Res. 1998 August 15; 26(16): 3794–3799.
PMCID: PMC147770
Conservation and divergence of NF-Y transcriptional activation function.
E Serra, K Zemzoumi, A di Silvio, R Mantovani, V Lardans, and C Dissous
Nucleic Acids Res. 1998 August 15; 26(16): 3800–3805.
PMCID: PMC147774
The Bacillus subtilis regulator SinR inhibits spoIIG promoter transcription in vitro without displacing RNA polymerase.
M A Cervin, R J Lewis, J A Brannigan, and G B Spiegelman
Nucleic Acids Res. 1998 August 15; 26(16): 3806–3812.
PMCID: PMC147748
An improved synthesis of oligodeoxynucleotide N3'-->P5' phosphoramidates and their chimera using hindered phosphoramidite monomers and a novel handle for reverse phase purification.
K L Fearon, B L Hirschbein, J S Nelson, M F Foy, M Q Nguyen, A Okruszek, S N McCurdy, J E Frediani, L A DeDionisio, A M Raible, E N Cagle, and V Boyd
Nucleic Acids Res. 1998 August 15; 26(16): 3813–3824.
PMCID: PMC147773
Automatic detection of conserved RNA structure elements in complete RNA virus genomes.
I L Hofacker, M Fekete, C Flamm, M A Huynen, S Rauscher, P E Stolorz, and P F Stadler
Nucleic Acids Res. 1998 August 15; 26(16): 3825–3836.
PMCID: PMC147758
2-Aminopurine fluorescence studies of base stacking interactions at abasic sites in DNA: metal-ion and base sequence effects.
J T Stivers
Nucleic Acids Res. 1998 August 15; 26(16): 3837–3844.
PMCID: PMC147768
Thermodynamic and base-pairing studies of matched and mismatched DNA dodecamer duplexes containing cis-syn, (6-4) and Dewar photoproducts of TT.
Y Jing, J F Kao, and J S Taylor
Nucleic Acids Res. 1998 August 15; 26(16): 3845–3853.
PMCID: PMC147757
Casein kinase II interacts with the bZIP domains of several transcription factors.
Y Yamaguchi, T Wada, F Suzuki, T Takagi, J Hasegawa, and H Handa
Nucleic Acids Res. 1998 August 15; 26(16): 3854–3861.
PMCID: PMC147779
In situ detection of protein-DNA interactions in filamentous fungi by in vivo footprinting.
M F Wolschek, F Narendja, J Karlseder, C P Kubicek, C Scazzocchio, and J Strauss
Nucleic Acids Res. 1998 August 15; 26(16): 3862–3864.
PMCID: PMC147760
Two color hybridization analysis using high density oligonucleotide arrays and energy transfer dyes.
J G Hacia, K Edgemon, B Sun, D Stern, S P Fodor, and F S Collins
Nucleic Acids Res. 1998 August 15; 26(16): 3865–3866.
PMCID: PMC147769
A simple method for sequencing small DNAs by introducing precise overlapping ends into restriction digestion fragments.
G Rena and M D Houslay
Nucleic Acids Res. 1998 August 15; 26(16): 3867–3868.
PMCID: PMC147749
A rapid and sensitive assay for histone acetyl-transferase activity.
S Ait-Si-Ali, S Ramirez, P Robin, D Trouche, and A Harel-Bellan
Nucleic Acids Res. 1998 August 15; 26(16): 3869–3870.
PMCID: PMC147752
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