| | Articles Global genome removal of thymine glycol in Escherichia coli requires endonuclease III but the persistence of processed repair intermediates rather than thymine glycol correlates with cellular sensitivity to high doses of hydrogen peroxide Mohammed Alanazi, Steven A. Leadon, and Isabel Mellon Nucleic Acids Res. 2002 November 1; 30(21): 4583–4591. PMCID: PMC135796 Temperature-dependent splicing of β-globin pre-mRNA Federica Gemignani, Peter Sazani, Paul Morcos, and Ryszard Kole Nucleic Acids Res. 2002 November 1; 30(21): 4592–4598. PMCID: PMC135830 A versatile communication module for controlling RNA folding and catalysis Alexis Kertsburg and Garrett A. Soukup Nucleic Acids Res. 2002 November 1; 30(21): 4599–4606. PMCID: PMC135812 The malaria parasite Plasmodium falciparum encodes members of the Puf RNA-binding protein family with conserved RNA binding activity Liwang Cui, Qi Fan, and Jinfang Li Nucleic Acids Res. 2002 November 1; 30(21): 4607–4617. PMCID: PMC135818 Human telomeric DNA: G-quadruplex, i-motif and Watson–Crick double helix Anh Tuân Phan and Jean-Louis Mergny Nucleic Acids Res. 2002 November 1; 30(21): 4618–4625. PMCID: PMC135813 Human mitochondrial DNA with large deletions repopulates organelles faster than full-length genomes under relaxed copy number control Francisca Diaz, Maria Pilar Bayona-Bafaluy, Michele Rana, Marialejandra Mora, Huiling Hao, and Carlos T. Moraes Nucleic Acids Res. 2002 November 1; 30(21): 4626–4633. PMCID: PMC135822 In vivo and in vitro interaction between human transcription factor MOK2 and nuclear lamin A/C Caroline Dreuillet, Jeanne Tillit, Michel Kress, and Michèle Ernoult-Lange Nucleic Acids Res. 2002 November 1; 30(21): 4634–4642. PMCID: PMC135794 A Cajal body-specific pseudouridylation guide RNA is composed of two box H/ACA snoRNA-like domains Arnold M. Kiss, Beáta E. Jády, Xavier Darzacq, Céline Verheggen, Edouard Bertrand, and Tamás Kiss Nucleic Acids Res. 2002 November 1; 30(21): 4643–4649. PMCID: PMC135803 Domains of human U4atac snRNA required for U12-dependent splicing in vivo Girish C. Shukla, Andrea J. Cole, Rosemary C. Dietrich, and Richard A. Padgett Nucleic Acids Res. 2002 November 1; 30(21): 4650–4657. PMCID: PMC135832 The curved DNA structure in the 5′-upstream region of the light-responsive genes: its universality, binding factor and function for cyanobacterial psbA transcription Munehiko Asayama, Hideki Kato, Junko Shibato, Makoto Shirai, and Takashi Ohyama Nucleic Acids Res. 2002 November 1; 30(21): 4658–4666. PMCID: PMC140650 An analysis of the sequence requirements of EDEN-BP for specific RNA binding Sylvie Bonnet-Corven, Yann Audic, Francis Omilli, and H. Beverley Osborne Nucleic Acids Res. 2002 November 1; 30(21): 4667–4674. PMCID: PMC135792 Multicopy genes uniquely amplified in the Y chromosome-specific repeats of the liverwort Marchantia polymorpha Kimitsune Ishizaki, Yuu Shimizu-Ueda, Sachiko Okada, Masayuki Yamamoto, Masaki Fujisawa, Katsuyuki T. Yamato, Hideya Fukuzawa, and Kanji Ohyama Nucleic Acids Res. 2002 November 1; 30(21): 4675–4681. PMCID: PMC135825 Development and comparison of procedures for the selection of delta ribozyme cleavage sites within the hepatitis B virus Lucien Junior Bergeron and Jean-Pierre Perreault Nucleic Acids Res. 2002 November 1; 30(21): 4682–4691. PMCID: PMC135815 Site-specific incorporation of an unnatural amino acid into proteins in mammalian cells Kensaku Sakamoto, Akiko Hayashi, Ayako Sakamoto, Daisuke Kiga, Hiroshi Nakayama, Akiko Soma, Takatsugu Kobayashi, Makoto Kitabatake, Koji Takio, Kazuki Saito, Mikako Shirouzu, Ichiro Hirao, and Shigeyuki Yokoyama Nucleic Acids Res. 2002 November 1; 30(21): 4692–4699. PMCID: PMC135798 Vanadate inhibits the ATPase activity and DNA binding capability of bacterial MutS. A structural model for the vanadate–MutS interaction at the Walker A motif Roberto J. Pezza, Marcos A. Villarreal, Guillermo G. Montich, and Carlos E. Argaraña Nucleic Acids Res. 2002 November 1; 30(21): 4700–4708. PMCID: PMC135828 Translational fusions with the engrailed repressor domain efficiently convert plant transcription factors into dominant-negative functions Heike Markel, John Chandler, and Wolfgang Werr Nucleic Acids Res. 2002 November 1; 30(21): 4709–4719. PMCID: PMC135802 Scanning confocal fluorescence microscopy for single molecule analysis of nucleotide excision repair complexes G. M. J. Segers-Nolten, C. Wyman, N. Wijgers, W. Vermeulen, A. T. M. Lenferink, J. H. J. Hoeijmakers, J. Greve, and C. Otto Nucleic Acids Res. 2002 November 1; 30(21): 4720–4727. PMCID: PMC135816 The fission yeast pfh1+ gene encodes an essential 5′ to 3′ DNA helicase required for the completion of S-phase Hiroyuki Tanaka, Gi-Hyuck Ryu, Yeon-Soo Seo, Koichi Tanaka, Hiroto Okayama, Stuart A. MacNeill, and Yasuhito Yuasa Nucleic Acids Res. 2002 November 1; 30(21): 4728–4739. PMCID: PMC135800 1H NMR determination of base-pair lifetimes in oligonucleotides containing single base mismatches Pratip K. Bhattacharya, Julie Cha, and Jacqueline K. Barton Nucleic Acids Res. 2002 November 1; 30(21): 4740–4750. PMCID: PMC135820 Highly conserved modified nucleosides influence Mg2+-dependent tRNA folding Kelly N. Nobles, Connie S. Yarian, Guihua Liu, Richard H. Guenther, and Paul F. Agris Nucleic Acids Res. 2002 November 1; 30(21): 4751–4760. PMCID: PMC135809 PipeOnline 2.0: automated EST processing and functional data sorting Patricia Ayoubi, Xiaojing Jin, Saul Leite, Xianghui Liu, Jeson Martajaja, Abdurashid Abduraham, Qiaolan Wan, Wei Yan, Eduardo Misawa, and Rolf A. Prade Nucleic Acids Res. 2002 November 1; 30(21): 4761–4769. PMCID: PMC135791 Heterogeneity in the modification and involvement of chromatin components of the CpG island of the silenced human CDH1 gene in cancer cells Shiro Koizume, Ken Tachibana, Takao Sekiya, Setsuo Hirohashi, and Masahiko Shiraishi Nucleic Acids Res. 2002 November 1; 30(21): 4770–4780. PMCID: PMC135805 The severe slow growth of Δsrs2 Δrqh1 in Schizosaccharomyces pombe is suppressed by loss of recombination and checkpoint genes Mohamed Maftahi, Justin C. Hope, Lissette Delgado-Cruzata, Christine S. Han, and Greg A. Freyer Nucleic Acids Res. 2002 November 1; 30(21): 4781–4792. PMCID: PMC135788 Hydrazide oligonucleotides: new chemical modification for chip array attachment and conjugation Stefan Raddatz, Jochen Mueller-Ibeler, Joachim Kluge, Ludger Wäß, Gerhard Burdinski, John R. Havens, Tom J. Onofrey, Daguang Wang, and Markus Schweitzer Nucleic Acids Res. 2002 November 1; 30(21): 4793–4802. PMCID: PMC135808 The apical stem–loop of the hepatitis B virus encapsidation signal folds into a stable tri–loop with two underlying pyrimidine bulges Sara Flodell, Jürgen Schleucher, Jenny Cromsigt, Hans Ippel, Karin Kidd-Ljunggren, and Sybren Wijmenga Nucleic Acids Res. 2002 November 1; 30(21): 4803–4811. PMCID: PMC135823 NAR Methods Online Advanced modular self-inactivating lentiviral expression vectors for multigene interventions in mammalian cells and in vivo transduction Barbara Mitta, Markus Rimann, Markus U. Ehrengruber, Martin Ehrbar, Valentin Djonov, Jens Kelm, and Martin Fussenegger Nucleic Acids Res. 2002 November 1; 30(21): e113. PMCID: PMC135834 Synthesis and evaluation of phosphorescent oligonucleotide probes for hybridisation assays Paul J. O’Sullivan, Martina Burke, Aleksi E. Soini, and Dmitri B. Papkovsky Nucleic Acids Res. 2002 November 1; 30(21): e114. PMCID: PMC135836 Stable and efficient cassette exchange under non-selectable conditions by combined use of two site-specific recombinases Matthias Lauth, Fabio Spreafico, Kathrin Dethleffsen, and Michael Meyer Nucleic Acids Res. 2002 November 1; 30(21): e115. PMCID: PMC135837 A common reference for cDNA microarray hybridizations Ellen Sterrenburg, Rolf Turk, Judith M. Boer, Gertjan B. van Ommen, and Johan T. den Dunnen Nucleic Acids Res. 2002 November 1; 30(21): e116. PMCID: PMC135839 Simultaneous determination of different DNA sequences by mass spectrometric evaluation of Sanger sequencing reactions Annette Kaetzke and Klaus Eschrich Nucleic Acids Res. 2002 November 1; 30(21): e117. PMCID: PMC135840 BACFinder: genomic localisation of large insert genomic clones based on restriction fingerprinting Mark L. Crowe, Debashis Rana, Fiona Fraser, Ian Bancroft, and Martin Trick Nucleic Acids Res. 2002 November 1; 30(21): e118. PMCID: PMC135841 Production of combinatorial libraries of fused genes by sequential transposition reactions Todd A. Naumann, Igor Y. Goryshin, and William S. Reznikoff Nucleic Acids Res. 2002 November 1; 30(21): e119. PMCID: PMC135842 Designing gene libraries from protein profiles for combinatorial protein experiments Wei Wang and Jeffery G. Saven Nucleic Acids Res. 2002 November 1; 30(21): e120. PMCID: PMC135844 EZ-Retrieve: a web-server for batch retrieval of coordinate-specified human DNA sequences and underscoring putative transcription factor-binding sites Haibo Zhang, Y. Ramanathan, Patricia Soteropoulos, Michael L. Recce, and Peter P. Tolias Nucleic Acids Res. 2002 November 1; 30(21): e121. PMCID: PMC135846 Efficiencies of fluorescence resonance energy transfer and contact-mediated quenching in oligonucleotide probes Salvatore A. E. Marras, Fred Russell Kramer, and Sanjay Tyagi Nucleic Acids Res. 2002 November 1; 30(21): e122. PMCID: PMC135848 AarI, a restriction endonuclease from Arthrobacter aurescens SS2-322, which recognizes the novel non-palindromic sequence 5′-CACCTGC(N)4/8-3′ R. Grigaitė, Z. Manelienė, and A. Janulaitis Nucleic Acids Res. 2002 November 1; 30(21): e123. PMCID: PMC135850 |