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Volume 28(20);  October 15, 2000
Articles
Comparative analysis of secondary structure of insect mitochondrial small subunit ribosomal RNA using maximum weighted matching
Roderic D. M. Page
Nucleic Acids Res. 2000 October 15; 28(20): 3839–3845.
PMCID: PMC110784
Structure and function of the fourth subunit (Dpb4p) of DNA polymerase [var epsilon] in Saccharomyces cerevisiae
Tomoko Ohya, Satoko Maki, Yasuo Kawasaki, and Akio Sugino
Nucleic Acids Res. 2000 October 15; 28(20): 3846–3852.
PMCID: PMC110797
Structure of HAP1-PC7 bound to DNA: implications for DNA recognition and allosteric effects of DNA-binding on transcriptional activation
Amanda K. Lukens, Daniel A. King, and Ronen Marmorstein
Nucleic Acids Res. 2000 October 15; 28(20): 3853–3863.
PMCID: PMC110793
Functional studies of the BTB domain in the Drosophila GAGA and Mod(mdg4) proteins
Doug Read, Manish J. Butte, Abby F. Dernburg, Manfred Frasch, and Thomas B. Kornberg
Nucleic Acids Res. 2000 October 15; 28(20): 3864–3870.
PMCID: PMC110799
Functional characterization of Ape1 variants identified in the human population
Masood Z. Hadi, Matthew A. Coleman, Krzysztof Fidelis, Harvey W. Mohrenweiser, and David M. Wilson, III
Nucleic Acids Res. 2000 October 15; 28(20): 3871–3879.
PMCID: PMC110798
Mitochondrial DNA ligase III function is independent of Xrcc1
Uma Lakshmipathy and Colin Campbell
Nucleic Acids Res. 2000 October 15; 28(20): 3880–3886.
PMCID: PMC110795
Base excision repair is efficient in cells lacking poly(ADP-ribose) polymerase 1
Momchil D. Vodenicharov, Frédéric R. Sallmann, Masahiko S. Satoh, and Guy G. Poirier
Nucleic Acids Res. 2000 October 15; 28(20): 3887–3896.
PMCID: PMC110786
Localisation of the DmCdc45 DNA replication factor in the mitotic cycle and during chorion gene amplification
David Loebel, Hella Huikeshoven, and Sue Cotterill
Nucleic Acids Res. 2000 October 15; 28(20): 3897–3903.
PMCID: PMC110785
Minimising the secondary structure of DNA targets by incorporation of a modified deoxynucleoside: implications for nucleic acid analysis by hybridisation
Hong-Khanh Nguyen and Edwin M. Southern
Nucleic Acids Res. 2000 October 15; 28(20): 3904–3909.
PMCID: PMC110783
PCR performance of the B-type DNA polymerase from the thermophilic euryarchaeon Thermococcus aggregans improved by mutations in the Y-GG/A motif
Kristina Böhlke, Francesca M. Pisani, Constantinos E. Vorgias, Bruno Frey, Harald Sobek, Mosè Rossi, and Garabed Antranikian
Nucleic Acids Res. 2000 October 15; 28(20): 3910–3917.
PMCID: PMC110800
Activation of the BRLF1 promoter and lytic cycle of Epstein–Barr virus by histone acetylation
Li-Kwan Chang and Shih-Tung Liu
Nucleic Acids Res. 2000 October 15; 28(20): 3918–3925.
PMCID: PMC110796
Characterization of the cold stress-induced cyanobacterial DEAD-box protein CrhC as an RNA helicase
Esther Yu and George W. Owttrim
Nucleic Acids Res. 2000 October 15; 28(20): 3926–3934.
PMCID: PMC110790
Transcription efficiency of human polymerase III genes in vitro does not depend on the RNP-forming autoantigen La
Stephan Weser, Michael Bachmann, Klaus H. Seifart, and Wolfgang Meißner
Nucleic Acids Res. 2000 October 15; 28(20): 3935–3942.
PMCID: PMC110789
Expansion of the (CTG)n repeat in the 5′-UTR of a reporter gene impedes translation
Gordana Raca, Elena Yu. Siyanova, Cynthia T. McMurray, and Sergei M. Mirkin
Nucleic Acids Res. 2000 October 15; 28(20): 3943–3949.
PMCID: PMC110791
Structure of RsrI methyltransferase, a member of the N6-adenine β class of DNA methyltransferases
Robert D. Scavetta, Chad B. Thomas, Martin A. Walsh, Sandra Szegedi, Andrzej Joachimiak, Richard I. Gumport, and Mair E. A. Churchill
Nucleic Acids Res. 2000 October 15; 28(20): 3950–3961.
PMCID: PMC110776
Substrate binding in vitro and kinetics of RsrI [N6-adenine] DNA methyltransferase
Sandra S. Szegedi, Norbert O. Reich, and Richard I. Gumport
Nucleic Acids Res. 2000 October 15; 28(20): 3962–3971.
PMCID: PMC110777
DNA binding properties in vivo and target recognition domain sequence alignment analyses of wild-type and mutant RsrI [N6-adenine] DNA methyltransferases
Sandra S. Szegedi and Richard I. Gumport
Nucleic Acids Res. 2000 October 15; 28(20): 3972–3981.
PMCID: PMC110778
Soggy, a spermatocyte-specific gene, lies 3.8 kb upstream of and antipodal to TEAD-2, a transcription factor expressed at the beginning of mouse development
Kotaro J. Kaneko and Melvin L. DePamphilis
Nucleic Acids Res. 2000 October 15; 28(20): 3982–3990.
PMCID: PMC110775
Cell cycle-independent removal of UV-induced pyrimidine dimers from the promoter and the transcription initiation domain of the human CDC2 gene
Stella Tommasi, Alexandros B. Oxyzoglou, and Gerd P. Pfeifer
Nucleic Acids Res. 2000 October 15; 28(20): 3991–3998.
PMCID: PMC110792
Elongation of repetitive DNA by DNA polymerase from a hyperthermophilic bacterium Thermus thermophilus
Norio Ogata and Hirofumi Morino
Nucleic Acids Res. 2000 October 15; 28(20): 3999–4004.
PMCID: PMC110782
p53 C-terminal interaction with DNA ends and gaps has opposing effect on specific DNA binding by the core
Sergey B. Zotchev, Marina Protopopova, and Galina Selivanova
Nucleic Acids Res. 2000 October 15; 28(20): 4005–4012.
PMCID: PMC110788
Hammerhead ribozymes selectively suppress mutant type I collagen mRNA in osteogenesis imperfecta fibroblasts
Paul A. Dawson and Joan C. Marini
Nucleic Acids Res. 2000 October 15; 28(20): 4013–4020.
PMCID: PMC110781
A heuristic graph comparison algorithm and its application to detect functionally related enzyme clusters
Hiroyuki Ogata, Wataru Fujibuchi, Susumu Goto, and Minoru Kanehisa
Nucleic Acids Res. 2000 October 15; 28(20): 4021–4028.
PMCID: PMC110779
Automatic detection of conserved gene clusters in multiple genomes by graph comparison and P-quasi grouping
Wataru Fujibuchi, Hiroyuki Ogata, Hideo Matsuda, and Minoru Kanehisa
Nucleic Acids Res. 2000 October 15; 28(20): 4029–4036.
PMCID: PMC110780
Hammerhead-mediated processing of satellite pDo500 family transcripts from Dolichopoda cave crickets
Andres A. Rojas, Alejandro Vazquez-Tello, Gerardo Ferbeyre, Federica Venanzetti, Lutz Bachmann, Bruno Paquin, Valerio Sbordoni, and Robert Cedergren
Nucleic Acids Res. 2000 October 15; 28(20): 4037–4043.
PMCID: PMC110794
DNA binding by single HMG box model proteins
Hong Xin, Susann Taudte, Neville R. Kallenbach, M. Paullin Limbach, and Richard S. Zitomer
Nucleic Acids Res. 2000 October 15; 28(20): 4044–4050.
PMCID: PMC110787
NAR Methods Online
Amplification of IgG VH and VL (Fab) from single human plasma cells and B cells
J. A. Coronella, P. Telleman, T. D. Truong, F. Ylera, and R. P. Junghans
Nucleic Acids Res. 2000 October 15; 28(20): e85.
PMCID: PMC110801
Rapid determination of short DNA sequences by the use of MALDI-MS
Eckhard Nordhoff, Christine Luebbert, Gabriela Thiele, Volker Heiser, and Hans Lehrach
Nucleic Acids Res. 2000 October 15; 28(20): e86.
PMCID: PMC110802
Solid phase DNA amplification: characterisation of primer attachment and amplification mechanisms
Céline Adessi, Gilles Matton, Guidon Ayala, Gerardo Turcatti, Jean-Jacques Mermod, Pascal Mayer, and Eric Kawashima
Nucleic Acids Res. 2000 October 15; 28(20): e87.
PMCID: PMC110803
High efficiency family shuffling based on multi-step PCR and in vivo DNA recombination in yeast: statistical and functional analysis of a combinatorial library between human cytochrome P450 1A1 and 1A2
Valérie Abécassis, Denis Pompon, and Gilles Truan
Nucleic Acids Res. 2000 October 15; 28(20): e88.
PMCID: PMC110804
Mutation analysis of the entire mitochondrial genome using denaturing high performance liquid chromatography
Bianca J. C. van den Bosch, René F. M. de Coo, Hans R. Scholte, Jeroen G. Nijland, Ruud van den Bogaard, Marianne de Visser, Christine E. M. de Die-Smulders, and Hubert J. M. Smeets
Nucleic Acids Res. 2000 October 15; 28(20): e89.
PMCID: PMC110805
Mirror orientation selection (MOS): a method for eliminating false positive clones from libraries generated by suppression subtractive hybridization
Denis V. Rebrikov, Olga V. Britanova, Nadya G. Gurskaya, Konstantin A. Lukyanov, Victor S. Tarabykin, and Sergey A. Lukyanov
Nucleic Acids Res. 2000 October 15; 28(20): e90.
PMCID: PMC110806
DNA probes on chip surfaces studied by scanning force microscopy using specific binding of colloidal gold
Robert Möller, Andrea Csáki, J. Michael Köhler, and Wolfgang Fritzsche
Nucleic Acids Res. 2000 October 15; 28(20): e91.
PMCID: PMC110807
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