| | Articles X-ray photoelectron spectroscopy and infrared spectroscopy study of maleimide-activated supports for immobilization of oligodeoxyribonucleotides Gang Shen, Maria Francis G. Anand, and Rastislav Levicky PMCID: PMC534618 Roles of Rad23 protein in yeast nucleotide excision repair Zhongwen Xie, Shuqian Liu, Yanbin Zhang, and Zhigang Wang PMCID: PMC534619 RNA interference using boranophosphate siRNAs: structure–activity relationships Allison H. S. Hall, Jing Wan, Erin E. Shaughnessy, Barbara Ramsay Shaw, and Kenneth A. Alexander PMCID: PMC534620 Identification of a novel human nuclear-encoded mitochondrial poly(A) polymerase Rafal Tomecki, Aleksandra Dmochowska, Kamil Gewartowski, Andrzej Dziembowski, and Piotr P. Stepien PMCID: PMC534615 Transient overexpression of mitochondrial transcription factor A (TFAM) is sufficient to stimulate mitochondrial DNA transcription, but not sufficient to increase mtDNA copy number in cultured cells Katharina Maniura-Weber, Steffi Goffart, Heike L. Garstka, Julio Montoya, and Rudolf J. Wiesner PMCID: PMC534614 A physiological connection between tmRNA and peptidyl-tRNA hydrolase functions in Escherichia coli Nongmaithem Sadananda Singh and Umesh Varshney PMCID: PMC534616 Comparative analysis of the Borrelia garinii genome G. Glöckner, R. Lehmann, A. Romualdi, S. Pradella, U. Schulte-Spechtel, M. Schilhabel, B. Wilske, J. Sühnel, and M. Platzer PMCID: PMC534632 The stability of Seeman JX DNA topoisomers of paranemic crossover (PX) molecules as a function of crossover number Prabal K. Maiti, Tod A. Pascal, Nagarajan Vaidehi, and William A. Goddard, III PMCID: PMC534617 Regulation of 6S RNA biogenesis by switching utilization of both sigma factors and endoribonucleases Kwang-sun Kim and Younghoon Lee PMCID: PMC534622 Novel algorithm for automated genotyping of microsatellites Toshiko Matsumoto, Wataru Yukawa, Yasuyuki Nozaki, Ryo Nakashige, Minori Shinya, Satoshi Makino, Masaru Yagura, Tomoki Ikuta, Tadashi Imanishi, Hidetoshi Inoko, Gen Tamiya, and Takashi Gojobori PMCID: PMC534627 Solution structure of a dsDNA:LNA triplex Jesper J. Sørensen, Jakob T. Nielsen, and Michael Petersen PMCID: PMC534625 DNA recombination with a heterospecific Cre homolog identified from comparison of the pac-c1 regions of P1-related phages Brian Sauer and Jeffrey McDermott PMCID: PMC534624 Functional role of G9a-induced histone methylation in small heterodimer partner-mediated transcriptional repression Konstantinos Boulias and Iannis Talianidis PMCID: PMC534628 The impact of SNPs on the interpretation of SAGE and MPSS experimental data Ana Paula M. Silva, Jorge E. S. De Souza, Pedro A. F. Galante, Gregory J. Riggins, Sandro J. De Souza, and Anamaria A. Camargo PMCID: PMC534621 The preferential binding of histone H1 to DNA scaffold-associated regions is determined by its C-terminal domain Alicia Roque, Mary Orrego, Imma Ponte, and Pedro Suau PMCID: PMC534626 RNA aptamers selected against the receptor activator of NF-κB acquire general affinity to proteins of the tumor necrosis factor receptor family Tadashi Mori, Akihiro Oguro, Takashi Ohtsu, and Yoshikazu Nakamura PMCID: PMC534629 Type II restriction endonuclease R.KpnI is a member of the HNH nuclease superfamily Matheshwaran Saravanan, Janusz M. Bujnicki, Iwona A. Cymerman, Desirazu N. Rao, and Valakunja Nagaraja PMCID: PMC534630 Preferential accessibility to specific genomic loci for the repair of double-strand breaks in human cells Hélène D'Anjou, Catherine Chabot, and Pierre Chartrand PMCID: PMC534631 The relative flexibility of B-DNA and A-RNA duplexes: database analysis Alberto Pérez, Agnes Noy, Filip Lankas, F. Javier Luque, and Modesto Orozco PMCID: PMC534633 NAR Methods Online A method to monitor replication fork progression in mammalian cells: nucleotide excision repair enhances and homologous recombination delays elongation along damaged DNA Fredrik Johansson, Anne Lagerqvist, Klaus Erixon, and Dag Jenssen PMCID: PMC534636 Combinatorial codon-based amino acid substitutions Jorge Yáñez, Martha Argüello, Joel Osuna, Xavier Soberón, and Paul Gaytán PMCID: PMC534637 Negatively charged self-assembling DNA/poloxamine nanospheres for in vivo gene transfer Bruno Pitard, Mahajoub Bello-Roufaï, Olivier Lambert, Peggy Richard, Léa Desigaux, Sarah Fernandes, Caroline Lanctin, Hélène Pollard, Mehdi Zeghal, Pierre-Yves Rescan, and Denis Escande PMCID: PMC534635 Systematic analysis of bicistronic reporter assay data Jonathan L. Jacobs and Jonathan D. Dinman PMCID: PMC534638 Bigenic Cre/loxP, puΔtk conditional genetic ablation You-Tzung Chen, Regis Levasseur, Sukeshi Vaishnav, Gerard Karsenty, and Allan Bradley PMCID: PMC534639 Protein-mediated error correction for de novo DNA synthesis Peter A. Carr, Jason S. Park, Yoon-Jae Lee, Tiffany Yu, Shuguang Zhang, and Joseph M. Jacobson PMCID: PMC534640 Mining SAGE data allows large-scale, sensitive screening of antisense transcript expression Ronan Quéré, Laurent Manchon, Mireille Lejeune, Oliver Clément, Fabien Pierrat, Béatrice Bonafoux, Thérèse Commes, David Piquemal, and Jacques Marti PMCID: PMC534641 Genomewide linkage searches for Mendelian disease loci can be efficiently conducted using high-density SNP genotyping arrays Gabrielle S. Sellick, Cheryl Longman, John Tolmie, Ruth Newbury-Ecob, Lynn Geenhalgh, Simon Hughes, Margo Whiteford, Christine Garrett, and Richard S. Houlston PMCID: PMC534642 In situ imaging and isolation of proteins using dsDNA oligonucleotides Graham Dellaire, Rozalia Nisman, Christopher H. Eskiw, and David P. Bazett-Jones PMCID: PMC534643 Corrigenda Nucleic Acids Res. 2004; 32(20): 6152. Published online 2004 November 24. doi: 10.1093/nar/gkh940.PMCID: PMC534623 Corrects: Junko Wakai, et al. A novel method of identifying genetic mutations using an electrochemical DNA array. Nucleic Acids Res. 2004; 32(18): e141. Nucleic Acids Res. 2004; 32(20): 6153. Published online 2004 November 24. doi: 10.1093/nar/gkh955.PMCID: PMC534634 Corrects: Eriks Rozners, et al. Hydration of short DNA, RNA and 2′-OMe oligonucleotides determined by osmotic stressing. Nucleic Acids Res. 2004; 32(1): 248–254. |
