| | Articles A novel class of plant-specific zinc-dependent DNA-binding protein that binds to A/T-rich DNA sequences Yukio Nagano, Hirofumi Furuhashi, Takehito Inaba, and Yukiko Sasaki PMCID: PMC60209 Pyret, a Ty3/Gypsy retrotransposon in Magnaporthe grisea contains an extra domain between the nucleocapsid and protease domains Hitoshi Nakayashiki, Hideki Matsuo, Izumi Chuma, Kenichi Ikeda, Shigeyuki Betsuyaku, Motoaki Kusaba, Yukio Tosa, and Shigeyuki Mayama PMCID: PMC60222 The role of acetylation in rDNA transcription Iwona Hirschler-Laszkiewicz, Alice Cavanaugh, Qiyue Hu, Jason Catania, Maria Laura Avantaggiati, and Lawrence I. Rothblum PMCID: PMC60214 Species-specific differences in the operational RNA code for aminoacylation of tRNATrp Feng Xu, Xianglong Chen, Li Xin, Li Chen, Youxin Jin, and Debao Wang PMCID: PMC60218 Efficient repair of large DNA loops in Saccharomyces cerevisiae Stephanie E. Corrette-Bennett, Natasha L. Mohlman, Zulma Rosado, Juan José Miret, Patricia M. Hess, Breck O. Parker, and Robert S. Lahue PMCID: PMC60213 The 1.19 Å X-ray structure of 2′-O-Me(CGCGCG)2 duplex shows dehydrated RNA with 2-methyl-2,4-pentanediol in the minor groove Dorota A. Adamiak, Wojciech R. Rypniewski, Jan Milecki, and Ryszard W. Adamiak PMCID: PMC60216 Highly conserved amino acids in Pax and Ets proteins are required for DNA binding and ternary complex assembly Daniel Fitzsimmons, Ryan Lutz, William Wheat, Helen M. Chamberlin, and James Hagman PMCID: PMC60220 UP element-dependent transcription at the Escherichia coli rrnB P1 promoter: positional requirements and role of the RNA polymerase α subunit linker Wenmao Meng, Tamara Belyaeva, Nigel J. Savery, Stephen J. W. Busby, Wilma E. Ross, Tamas Gaal, Richard L. Gourse, and Mark S. Thomas PMCID: PMC60210 SUMO modification of Rad22, the Schizosaccharomyces pombe homologue of the recombination protein Rad52 Jenny C. Y. Ho, Nicholas J. Warr, Harumi Shimizu, and Felicity Z. Watts PMCID: PMC60211 Improved hybridisation potential of oligonucleotides comprising O-methylated anhydrohexitol nucleoside congeners A. Van Aerschot, M. Meldgaard, G. Schepers, F. Volders, J. Rozenski, R. Busson, and P. Herdewijn PMCID: PMC60215 Families of restriction enzymes: an analysis prompted by molecular and genetic data for type ID restriction and modification systems Annette J. B. Titheradge, Jonathan King, , Junichi Ryu, and Noreen E. Murray PMCID: PMC60208 Arg660Ser mutation in Thermus aquaticus DNA polymerase I suppresses T→C transitions: implication of wobble base pair formation at the nucleotide incorporation step Katsushi Yoshida, Aki Tosaka, Hiroyuki Kamiya, Takashi Murate, Hiroshi Kasai, Yuji Nimura, Masanori Ogawa, Shonen Yoshida, and Motoshi Suzuki PMCID: PMC60221 Degeneration of a homing endonuclease and its target sequence in a wild yeast strain Frederick S. Gimble PMCID: PMC60219 The topoisomerase II poison clerocidin alkylates non-paired guanines of DNA: implications for irreversible stimulation of DNA cleavage Barbara Gatto, Sara Richter, Stefano Moro, Giovanni Capranico, and Manlio Palumbo PMCID: PMC60217 Proton exchange and local stability in a DNA triple helix containing a G.TA triad Lihong Jiang and Irina M. Russu PMCID: PMC60212 In vivo gene repair of point and frameshift mutations directed by chimeric RNA/DNA oligonucleotides and modified single-stranded oligonucleotides Li Liu, Michael C. Rice, and Eric B. Kmiec PMCID: PMC60207 DNA exhibits multi-stranded binding recognition on glass microarrays Shirley J. Shi, Alicia Scheffer, Erik Bjeldanes, Mark A. Reynolds, and Lyle J. Arnold PMCID: PMC60223 NAR Methods Online Duplex Scorpion primers in SNP analysis and FRET applications Antonio Solinas, Lynda J. Brown, Catherine McKeen, John M. Mellor, Jamie Nicol, Nicky Thelwell, and Tom Brown PMCID: PMC60224 Random multi-recombinant PCR for the construction of combinatorial protein libraries Toru Tsuji, Michiko Onimaru, and Hiroshi Yanagawa PMCID: PMC60225 Expression and purification of recombinant human c-Fos/c-Jun that is highly active in DNA binding and transcriptional activation in vitro Heather A. Ferguson and James A. Goodrich PMCID: PMC60226 A novel yeast system for in vivo selection of recognition sequences: defining an optimal c-Myb-responsive element Tone Berge, Stine L. Bergholtz, Kristin Brevik Andersson, and Odd S. Gabrielsen PMCID: PMC60227 Genetic synthetic lethality screen at the single gene level in cultured human cells Arnold H. Simons, Naomi Dafni, Iris Dotan, Yoram Oron, and Dan Canaani PMCID: PMC60228 Evaluation of phosphodiesterase I-based protocols for the detection of multiply damaged sites in DNA: the detection of abasic, oxidative and alkylative tandem damage in DNA oligonucleotides Karen J. Bowman, Rachel Le Pla, Yves Guichard, Peter B. Farmer, and George D. D. Jones PMCID: PMC60229 |
