| | Survey and Summary The
RAG proteins in V(D)J recombination: more than just a nuclease Moshe J. Sadofsky Nucleic Acids Res. 2001 April 1; 29(7): 1399–1409. PMCID: PMC31291 Articles All Tcf HMG box transcription
factors interact with Groucho-related co-repressors Helen Brantjes, Jeroen Roose, Marc van
de Wetering, and Hans Clevers Nucleic Acids Res. 2001 April 1; 29(7): 1410–1419. PMCID: PMC31284 Enhancement of translation by
the epsilon element is independent of the sequence of the 460 region
of
16S rRNA Michael O’Connor and Albert
E. Dahlberg Nucleic Acids Res. 2001 April 1; 29(7): 1420–1425. PMCID: PMC31293 Monitoring the structure of Escherichia coli RNase P RNA in the presence of
various divalent metal ions Mathias Brännvall, Nils
E. Mikkelsen, and Leif
A. Kirsebom Nucleic Acids Res. 2001 April 1; 29(7): 1426–1432. PMCID: PMC31289 Monitoring S phase progression
globally and locally using BrdU incorporation in TK+ yeast
strains Armelle Lengronne, Philippe Pasero, Aaron Bensimon, and Etienne Schwob Nucleic Acids Res. 2001 April 1; 29(7): 1433–1442. PMCID: PMC31278 The human XPG gene: gene architecture,
alternative splicing and single nucleotide polymorphisms Steffen Emmert, Thomas
D. Schneider, Sikandar
G. Khan, and Kenneth
H. Kraemer Nucleic Acids Res. 2001 April 1; 29(7): 1443–1452. PMCID: PMC31292 Evidence for regulation of protein
synthesis at the elongation step by CDK1/cyclin B phosphorylation Annabelle Monnier, Robert Bellé, Julia Morales, Patrick Cormier, Sandrine Boulben, and Odile Mulner-Lorillon Nucleic Acids Res. 2001 April 1; 29(7): 1453–1457. PMCID: PMC31266 Site-specifically located 8-amino-2′-deoxyguanosine: thermodynamic stability
and mutagenic properties in Escherichia coli Lata Venkatarangan, A. Sivaprasad, Francis Johnson, and Ashis K. Basu Nucleic Acids Res. 2001 April 1; 29(7): 1458–1463. PMCID: PMC31287 Comparison of intron-containing
and intron-lacking human genes elucidates putative exonic splicing enhancers Alexei Fedorov, Serge Saxonov, Larisa Fedorova, and Iraj Daizadeh Nucleic Acids Res. 2001 April 1; 29(7): 1464–1469. PMCID: PMC31294 Hybrid characteristics of oligonucleotides
consisting of isonucleoside 2′,5′-anhydro-3′-deoxy-3′-(thymin-1-yl)-d-mannitol
with different linkage modes Zhen Lei, Ling Zhang, Liang
Ren Zhang, Jun Chen, Ji
Mei Min, and Li
He Zhang Nucleic Acids Res. 2001 April 1; 29(7): 1470–1475. PMCID: PMC31276 SfiI endonuclease
activity is strongly influenced by the non-specific sequence in
the middle of its recognition site Shelley A. Williams and Stephen
E. Halford Nucleic Acids Res. 2001 April 1; 29(7): 1476–1483. PMCID: PMC31285 Methylation by a mutant T2 DNA [N6-adenine] methyltransferase
expands the usage of RecA-assisted endonuclease (RARE) cleavage Irina Minko, Stanley Hattman, R. Stephen Lloyd, and Valeri Kossykh Nucleic Acids Res. 2001 April 1; 29(7): 1484–1490. PMCID: PMC31273 DNA methyltransferases of the
cyanobacterium Anabaena PCC 7120 Andrey V. Matveyev, Kathryn
T. Young, Andrew Meng, and Jeff Elhai Nucleic Acids Res. 2001 April 1; 29(7): 1491–1506. PMCID: PMC31280 A single alteration 20 nt 5′ to an editing target inhibits chloroplast
RNA editing in vivo Martha L. Reed, Nemo
M. Peeters, and Maureen
R. Hanson Nucleic Acids Res. 2001 April 1; 29(7): 1507–1513. PMCID: PMC31290 Target gene search for the metal-responsive transcription
factor MTF-1 P. Lichtlen, Y. Wang, T. Belser, O. Georgiev, U. Certa, R. Sack, and W. Schaffner Nucleic Acids Res. 2001 April 1; 29(7): 1514–1523. PMCID: PMC31279 Transcriptional adaptor and histone
acetyltransferase proteins in Arabidopsis and their
interactions with CBF1, a transcriptional activator involved in
cold-regulated gene expression Eric J. Stockinger, Yaopan Mao, Martha K. Regier, Steven J. Triezenberg, and Michael F. Thomashow Nucleic Acids Res. 2001 April 1; 29(7): 1524–1533. PMCID: PMC31267 Ribozyme minigene-mediated RAD51
down-regulation increases radiosensitivity of human prostate cancer
cells S. J. Collis, A. Tighe, S.
D. Scott, S. A. Roberts, J. H. Hendry, and G. P. Margison Nucleic Acids Res. 2001 April 1; 29(7): 1534–1538. PMCID: PMC31295 Trends in lipoplex physical properties
dependent on cationic lipid structure, vehicle and complexation procedure
do not correlate with biological activity Marilyn E. Ferrari, Denis Rusalov, Joel Enas, and Carl
J. Wheeler Nucleic Acids Res. 2001 April 1; 29(7): 1539–1548. PMCID: PMC31288 Characterization of uracil-DNA
glycosylase activity from Trypanosoma cruzi and
its stimulation by
AP endonuclease M. Esther Fárez-Vidal, Cláribel Gallego, Luis
Miguel Ruiz-Pérez, and Dolores González-Pacanowska Nucleic Acids Res. 2001 April 1; 29(7): 1549–1555. PMCID: PMC31275 Trypanosome spliced leader RNA
genes contain the first identified RNA polymerase II gene promoter
in these organisms Gwen Gilinger and Vivian Bellofatto Nucleic Acids Res. 2001 April 1; 29(7): 1556–1564. PMCID: PMC31286 Enhancing the catalytic repertoire
of nucleic acids:
a systematic study of linker length and rigidity Sarah E. Lee, Alexander Sidorov, Thierry Gourlain, Nathalie Mignet, Simon
J. Thorpe, John A. Brazier, Mark
J. Dickman, David
P. Hornby, Jane
A. Grasby, and David M. Williams Nucleic Acids Res. 2001 April 1; 29(7): 1565–1573. PMCID: PMC31265 Different dynamics in nuclear
entry of subunits of the repair/transcription factor TFIIH Fabio Santagati, Elena Botta, Miria Stefanini, and Antonia
M. Pedrini Nucleic Acids Res. 2001 April 1; 29(7): 1574–1581. PMCID: PMC31283 Mitochondrial DNA ligase function
in Saccharomyces cerevisiae Sarah L. Donahue, Brian
E. Corner, Laura Bordone, and Colin Campbell Nucleic Acids Res. 2001 April 1; 29(7): 1582–1589. PMCID: PMC31271 Highly expressed and alien genes
of the Synechocystis genome Jan Mrázek, Devaki Bhaya, Arthur R. Grossman, and Samuel Karlin Nucleic Acids Res. 2001 April 1; 29(7): 1590–1601. PMCID: PMC31270 Phylogenetic analysis of tmRNA
genes within a bacterial subgroup reveals a specific structural
signature Brice Felden, Christian Massire, Eric Westhof, John F. Atkins, and Raymond F. Gesteland Nucleic Acids Res. 2001 April 1; 29(7): 1602–1607. PMCID: PMC31281 Identification of thermophilic
species by the amino acid compositions deduced from their genomes David P. Kreil and Christos
A. Ouzounis Nucleic Acids Res. 2001 April 1; 29(7): 1608–1615. PMCID: PMC31282 GenEST, a powerful bidirectional
link between cDNA sequence data and gene expression profiles
generated by cDNA-AFLP Ling Qin, Pjotr Prins, John
T. Jones, Herman Popeijus, Geert Smant, Jaap Bakker, and Johannes Helder Nucleic Acids Res. 2001 April 1; 29(7): 1616–1622. PMCID: PMC31277 Identification of 10 novel snoRNA
gene clusters from Arabidopsis thaliana Qu Liang-Hu, Meng Qing, Zhou Hui, and Chen Yue-Qin Nucleic Acids Res. 2001 April 1; 29(7): 1623–1630. PMCID: PMC31268 Cooperative binding of effectors
by an allosteric ribozyme Antony M. Jose, Garrett
A. Soukup, and Ronald
R. Breaker Nucleic Acids Res. 2001 April 1; 29(7): 1631–1637. PMCID: PMC31269 Ku80 is required for addition
of N nucleotides to V(D)J recombination junctions by terminal deoxynucleotidyl transferase Mary M. Purugganan, Sundeep Shah, John F. Kearney, and David B. Roth Nucleic Acids Res. 2001 April 1; 29(7): 1638–1646. PMCID: PMC31272 ParAlign: a parallel sequence
alignment algorithm for rapid and sensitive database searches Torbjørn Rognes Nucleic Acids Res. 2001 April 1; 29(7): 1647–1652. PMCID: PMC31274 NAR Methods Online The length of telomeric G-rich
strand 3′-overhang measured by oligonucleotide
ligation assay Graziella Cimino-Reale, Esterina Pascale, Eva Battiloro, Giuseppe Starace, Roberto Verna, and Ettore D’Ambrosio Nucleic Acids Res. 2001 April 1; 29(7): e35. PMCID: PMC31296 Detection of mitochondrial single
nucleotide polymorphisms using a primer elongation reaction
on oligonucleotide microarrays Fikret Erdogan, Roland Kirchner, Wolfgang Mann, Hans-Hilger Ropers, and Ulrike A. Nuber Nucleic Acids Res. 2001 April 1; 29(7): e36. PMCID: PMC31297 Assembly of large genomic segments
in artificial chromosomes by homologous recombination in Escherichia
coli Margherita Sosio, Elena Bossi, and Stefano Donadio Nucleic Acids Res. 2001 April 1; 29(7): e37. PMCID: PMC31298 Manufacturing DNA microarrays
of high spot homogeneity and reduced background signal Frank Diehl, Susanne Grahlmann, Markus Beier, and Jörg
D. Hoheisel Nucleic Acids Res. 2001 April 1; 29(7): e38. PMCID: PMC31299 A GFP-equipped bidirectional
expression module well suited for monitoring tetracycline-regulated
gene expression in mouse H. E. Krestel, M. Mayford, P. H. Seeburg, and R. Sprengel Nucleic Acids Res. 2001 April 1; 29(7): e39. PMCID: PMC31300 Efficient gene activation in
cultured mammalian cells mediated by FLP recombinase-expressing
recombinant adenovirus Masakazu Nakano, Kazuhiko Odaka, Masakazu Ishimura, Saki Kondo, Naoto Tachikawa, Joe Chiba, Yumi Kanegae, and Izumu Saito Nucleic Acids Res. 2001 April 1; 29(7): e40. PMCID: PMC31301 |