Genomics and Bioinformatics Software Tools

Description:
MedMine: Searches and organizes the biomedical literature on genes, gene-gene relationships, and gene-drug relationships. MatchMiner: Translates among gene identifier types for lists of hundreds or thousands of genes. GoMiner: Addresses the question, "Now that I've done the gene expression experiment and identified a set of 'interesting' genes, what do those genes mean biologically?" CIMMiner: Generates color-coded Clustered Image Maps (CIMs) ("heat maps") to represent high-dimensional data sets such as gene expression profiles.

Web Sites:
http://discover.nci.nih.gov
MedMiner http://discover.nci.nih.gov/textmining/main.jsp
MatchMiner http://discover.nci.nih.gov/matchminer/html/index.jsp
GoMiner http://discover.nci.nih.gov/gominer/index.jsp
CIMMiner http://discover.nci.nih.gov/nature2000/tools/cimmaker.jsp


Availability:
Web accessible

Contact:
Dr. John N. Weinstein; weinstein@dtpax2.ncifcrf.gov

This page last updated 2006-05-12 00:00:00