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Volume 105(22);  June 3, 2008
Letters
Natural selection does not explain cultural rates of change
John R. Skoyles
Proc Natl Acad Sci U S A. 2008 June 3; 105(22): E27. doi: 10.1073/pnas.0802586105.
PMCID: PMC2409415
Reply to Skoyles: Natural selection does appear to explain some cultural rates of change
Deborah S. Rogers and Paul R. Ehrlich
Proc Natl Acad Sci U S A. 2008 June 3; 105(22): E28. doi: 10.1073/pnas.0803570105.
PMCID: PMC2409405
Reply to Bagni: On BC1 RNA and the fragile X mental retardation protein
Anna Iacoangeli, Timofey S. Rozhdestvensky, Natalia Dolzhanskaya, Barthélémy Tournier, Janin Schütt, Jürgen Brosius, Robert B. Denman, Edouard W. Khandjian, Stefan Kindler, and Henri Tiedge
Proc Natl Acad Sci U S A. 2008 June 3; 105(22): E29. doi: 10.1073/pnas.0803737105.
PMCID: PMC2409383
This Week in PNAS
In This Issue
Proc Natl Acad Sci U S A. 2008 June 3; 105(22): 7625–7626. doi: 10.1073/iti2208105.
PMCID: PMC2409401
Commentaries
Muscle insulin resistance: A case of fat overconsumption, not mitochondrial dysfunction
Edward W. Kraegen, Gregory J. Cooney, and Nigel Turner
Proc Natl Acad Sci U S A. 2008 June 3; 105(22): 7627–7628. doi: 10.1073/pnas.0803901105.
PMCID: PMC2409426
Notch2 paves the way to mast cells by Hes1 and Gata3
Priya Dedhia, Taku Kambayashi, and Warren S. Pear
Proc Natl Acad Sci U S A. 2008 June 3; 105(22): 7629–7630. doi: 10.1073/pnas.0803439105.
PMCID: PMC2409425
Physical Sciences
Applied Mathematics
Inflationary dynamics for matrix eigenvalue problems
Eric J. Heller, Lev Kaplan, and Frank Pollmann
Proc Natl Acad Sci U S A. 2008 June 3; 105(22): 7631–7635. doi: 10.1073/pnas.0801047105.
PMCID: PMC2409430
Applied Physical Sciences
Passivation of irregular surfaces accessed by diffusion
M. Filoche, D. S. Grebenkov, J. S. Andrade, Jr., and B. Sapoval
Proc Natl Acad Sci U S A. 2008 June 3; 105(22): 7636–7640. doi: 10.1073/pnas.0706915105.
PMCID: PMC2409382
Chemistry
Controlling the efficiency of an artificial light-harvesting complex
Janne Savolainen, Riccardo Fanciulli, Niels Dijkhuizen, Ana L. Moore, Jürgen Hauer, Tiago Buckup, Marcus Motzkus, and Jennifer L. Herek
Proc Natl Acad Sci U S A. 2008 June 3; 105(22): 7641–7646. doi: 10.1073/pnas.0711927105.
PMCID: PMC2409393
Lithium monoxide anion: A ground-state triplet with the strongest base to date
Zhixin Tian, Bun Chan, Michael B. Sullivan, Leo Radom, and Steven R. Kass
Proc Natl Acad Sci U S A. 2008 June 3; 105(22): 7647–7651. doi: 10.1073/pnas.0801393105.
PMCID: PMC2409378
Thiolate-bridged dinuclear iron(tris-carbonyl)–nickel complexes relevant to the active site of [NiFe] hydrogenase
Yasuhiro Ohki, Kazunari Yasumura, Katsuaki Kuge, Soichiro Tanino, Masaru Ando, Zilong Li, and Kazuyuki Tatsumi
Proc Natl Acad Sci U S A. 2008 June 3; 105(22): 7652–7657. doi: 10.1073/pnas.0800538105.
PMCID: PMC2409409
From the Cover:
Role of excited electronic states in the high-pressure amorphization of benzene
Margherita Citroni, Roberto Bini, Paolo Foggi, and Vincenzo Schettino
Proc Natl Acad Sci U S A. 2008 June 3; 105(22): 7658–7663. doi: 10.1073/pnas.0802269105.
PMCID: PMC2409391
Engineering
From the Cover:
Micropatterning of costimulatory ligands enhances CD4+ T cell function
Keyue Shen, V. Kaye Thomas, Michael L. Dustin, and Lance C. Kam
Proc Natl Acad Sci U S A. 2008 June 3; 105(22): 7791–7796. doi: 10.1073/pnas.0710295105.
PMCID: PMC2409411
Environmental Sciences
Impact of geoengineering schemes on the global hydrological cycle
G. Bala, P. B. Duffy, and K. E. Taylor
Proc Natl Acad Sci U S A. 2008 June 3; 105(22): 7664–7669. doi: 10.1073/pnas.0711648105.
PMCID: PMC2409412
Biological Sciences
Agricultural Sciences
Acid sphingomyelinase involvement in tumor necrosis factor α-regulated vascular and steroid disruption during luteolysis in vivo
Luiz E. Henkes, Brian T. Sullivan, Maureen P. Lynch, Richard Kolesnick, Danielle Arsenault, Mark Puder, John S. Davis, and Bo R. Rueda
Proc Natl Acad Sci U S A. 2008 June 3; 105(22): 7670–7675. doi: 10.1073/pnas.0712260105.
PMCID: PMC2409385
Anthropology
Dating the late prehistoric dispersal of Polynesians to New Zealand using the commensal Pacific rat
Janet M. Wilmshurst, Atholl J. Anderson, Thomas F. G. Higham, and Trevor H. Worthy
Proc Natl Acad Sci U S A. 2008 June 3; 105(22): 7676–7680. doi: 10.1073/pnas.0801507105.
PMCID: PMC2409139
Biochemistry
Contacts between membrane proximal regions of the PDGF receptor ectodomain are required for receptor activation but not for receptor dimerization
Yan Yang, Satoru Yuzawa, and Joseph Schlessinger
Proc Natl Acad Sci U S A. 2008 June 3; 105(22): 7681–7686. doi: 10.1073/pnas.0802896105.
PMCID: PMC2409387
ALIX-CHMP4 interactions in the human ESCRT pathway
John McCullough, Robert D. Fisher, Frank G. Whitby, Wesley I. Sundquist, and Christopher P. Hill
Proc Natl Acad Sci U S A. 2008 June 3; 105(22): 7687–7691. doi: 10.1073/pnas.0801567105.
PMCID: PMC2409388
Dimeric subunit stoichiometry of the human voltage-dependent proton channel Hv1
Seok-Yong Lee, James A. Letts, and Roderick MacKinnon
Proc Natl Acad Sci U S A. 2008 June 3; 105(22): 7692–7695. doi: 10.1073/pnas.0803277105.
PMCID: PMC2409406
Insights into the stator assembly of the Vibrio flagellar motor from the crystal structure of MotY
Seiji Kojima, Akari Shinohara, Hiroyuki Terashima, Toshiharu Yakushi, Mayuko Sakuma, Michio Homma, Keiichi Namba, and Katsumi Imada
Proc Natl Acad Sci U S A. 2008 June 3; 105(22): 7696–7701. doi: 10.1073/pnas.0800308105.
PMCID: PMC2409386
Interplay of PDZ and protease domain of DegP ensures efficient elimination of misfolded proteins
Tobias Krojer, Karen Pangerl, Juliane Kurt, Justyna Sawa, Christoph Stingl, Karl Mechtler, Robert Huber, Michael Ehrmann, and Tim Clausen
Proc Natl Acad Sci U S A. 2008 June 3; 105(22): 7702–7707. doi: 10.1073/pnas.0803392105.
PMCID: PMC2396557
Biophysics
Controlling the efficiency of an artificial light-harvesting complex
Janne Savolainen, Riccardo Fanciulli, Niels Dijkhuizen, Ana L. Moore, Jürgen Hauer, Tiago Buckup, Marcus Motzkus, and Jennifer L. Herek
Proc Natl Acad Sci U S A. 2008 June 3; 105(22): 7641–7646. doi: 10.1073/pnas.0711927105.
PMCID: PMC2409393
Coevolution at protein complex interfaces can be detected by the complementarity trace with important impact for predictive docking
Hocine Madaoui and Raphaël Guerois
Proc Natl Acad Sci U S A. 2008 June 3; 105(22): 7708–7713. doi: 10.1073/pnas.0707032105.
PMCID: PMC2409390
Load-dependent ADP binding to myosins V and VI: Implications for subunit coordination and function
Yusuke Oguchi, Sergey V. Mikhailenko, Takashi Ohki, Adrian O. Olivares, Enrique M. De La Cruz, and Shin'ichi Ishiwata
Proc Natl Acad Sci U S A. 2008 June 3; 105(22): 7714–7719. doi: 10.1073/pnas.0800564105.
PMCID: PMC2409399
Two-dimensional infrared spectra of isotopically diluted amyloid fibrils from Aβ40
Yung Sam Kim, Liu Liu, Paul H. Axelsen, and Robin M. Hochstrasser
Proc Natl Acad Sci U S A. 2008 June 3; 105(22): 7720–7725. doi: 10.1073/pnas.0802993105.
PMCID: PMC2409414
Electrostatic basis for the unidirectionality of the primary proton transfer in cytochrome c oxidase
Andrei V. Pisliakov, Pankaz K. Sharma, Zhen T. Chu, Maciej Haranczyk, and Arieh Warshel
Proc Natl Acad Sci U S A. 2008 June 3; 105(22): 7726–7731. doi: 10.1073/pnas.0800580105.
PMCID: PMC2409407
Cell Biology
Asymmetric mitosis: Unequal segregation of proteins destined for degradation
Luis C. Fuentealba, Edward Eivers, Douglas Geissert, Vincent Taelman, and E. M. De Robertis
Proc Natl Acad Sci U S A. 2008 June 3; 105(22): 7732–7737. doi: 10.1073/pnas.0803027105.
PMCID: PMC2402384
Control of endothelial cell proliferation and migration by VEGF signaling to histone deacetylase 7
Shusheng Wang, Xiumin Li, Maribel Parra, Eric Verdin, Rhonda Bassel-Duby, and Eric N. Olson
Proc Natl Acad Sci U S A. 2008 June 3; 105(22): 7738–7743. doi: 10.1073/pnas.0802857105.
PMCID: PMC2409381
From the Cover:
A drug-controllable tag for visualizing newly synthesized proteins in cells and whole animals
Michael Z. Lin, Jeffrey S. Glenn, and Roger Y. Tsien
Proc Natl Acad Sci U S A. 2008 June 3; 105(22): 7744–7749. doi: 10.1073/pnas.0803060105.
PMCID: PMC2402386
Developmental Biology
A nonneural epithelial domain of embryonic cranial neural folds gives rise to ectomesenchyme
Marie Anne Breau, Thomas Pietri, Marc P. Stemmler, Jean Paul Thiery, and James A. Weston
Proc Natl Acad Sci U S A. 2008 June 3; 105(22): 7750–7755. doi: 10.1073/pnas.0711344105.
PMCID: PMC2408482
Cdx gene deficiency compromises embryonic hematopoiesis in the mouse
Yuan Wang, Akiko Yabuuchi, Shannon McKinney-Freeman, Danica M. K. Ducharme, Manas K. Ray, Kallayanee Chawengsaksophak, Trevor K. Archer, and George Q. Daley
Proc Natl Acad Sci U S A. 2008 June 3; 105(22): 7756–7761. doi: 10.1073/pnas.0708951105.
PMCID: PMC2409377
Promoter elements associated with RNA Pol II stalling in the Drosophila embryo
David A. Hendrix, Joung-Woo Hong, Julia Zeitlinger, Daniel S. Rokhsar, and Michael S. Levine
Proc Natl Acad Sci U S A. 2008 June 3; 105(22): 7762–7767. doi: 10.1073/pnas.0802406105.
PMCID: PMC2396556
Ecology
Spatial scaling of functional gene diversity across various microbial taxa
Jizhong Zhou, Sanghoon Kang, Christopher W. Schadt, and Charles T. Garten, Jr.
Proc Natl Acad Sci U S A. 2008 June 3; 105(22): 7768–7773. doi: 10.1073/pnas.0709016105.
PMCID: PMC2409408
From the Cover:
A latitudinal diversity gradient in planktonic marine bacteria
Jed A. Fuhrman, Joshua A. Steele, Ian Hewson, Michael S. Schwalbach, Mark V. Brown, Jessica L. Green, and James H. Brown
Proc Natl Acad Sci U S A. 2008 June 3; 105(22): 7774–7778. doi: 10.1073/pnas.0803070105.
PMCID: PMC2409396
Evolution
Natural variation in Pristionchus pacificus insect pheromone attraction involves the protein kinase EGL-4
Ray L. Hong, Hanh Witte, and Ralf J. Sommer
Proc Natl Acad Sci U S A. 2008 June 3; 105(22): 7779–7784. doi: 10.1073/pnas.0708406105.
PMCID: PMC2409422
Genetics
p53 stabilization in response to DNA damage requires Akt/PKB and DNA-PK
Karen A. Boehme, Roman Kulikov, and Christine Blattner
Proc Natl Acad Sci U S A. 2008 June 3; 105(22): 7785–7790. doi: 10.1073/pnas.0703423105.
PMCID: PMC2409394
Immunology
From the Cover:
Micropatterning of costimulatory ligands enhances CD4+ T cell function
Keyue Shen, V. Kaye Thomas, Michael L. Dustin, and Lance C. Kam
Proc Natl Acad Sci U S A. 2008 June 3; 105(22): 7791–7796. doi: 10.1073/pnas.0710295105.
PMCID: PMC2409411
T cell receptor signaling controls Foxp3 expression via PI3K, Akt, and mTOR
Stephan Sauer, Ludovica Bruno, Arnulf Hertweck, David Finlay, Marion Leleu, Mikhail Spivakov, Zachary A. Knight, Bradley S. Cobb, Doreen Cantrell, Eric O'Connor, Kevan M. Shokat, Amanda G. Fisher, and Matthias Merkenschlager
Proc Natl Acad Sci U S A. 2008 June 3; 105(22): 7797–7802. doi: 10.1073/pnas.0800928105.
PMCID: PMC2409380
A NOD2–NALP1 complex mediates caspase-1-dependent IL-1β secretion in response to Bacillus anthracis infection and muramyl dipeptide
Li-Chung Hsu, Syed R. Ali, Shauna McGillivray, Ping-Hui Tseng, Sanjeev Mariathasan, Eric W. Humke, Lars Eckmann, Jonathan J. Powell, Victor Nizet, Vishva M. Dixit, and Michael Karin
Proc Natl Acad Sci U S A. 2008 June 3; 105(22): 7803–7808. doi: 10.1073/pnas.0802726105.
PMCID: PMC2409384
Medical Sciences
Modulation of TNF-α-converting enzyme by the spike protein of SARS-CoV and ACE2 induces TNF-α production and facilitates viral entry
Shiori Haga, Norio Yamamoto, Chikako Nakai-Murakami, Yoshiaki Osawa, Kenzo Tokunaga, Tetsutaro Sata, Naoki Yamamoto, Takehiko Sasazuki, and Yukihito Ishizaka
Proc Natl Acad Sci U S A. 2008 June 3; 105(22): 7809–7814. doi: 10.1073/pnas.0711241105.
PMCID: PMC2409424
High-fat diets cause insulin resistance despite an increase in muscle mitochondria
Chad R. Hancock, Dong-Ho Han, May Chen, Shin Terada, Toshihiro Yasuda, David C. Wright, and John O. Holloszy
Proc Natl Acad Sci U S A. 2008 June 3; 105(22): 7815–7820. doi: 10.1073/pnas.0802057105.
PMCID: PMC2409421
Involvement of estrogen-related receptors in transcriptional response to hypoxia and growth of solid tumors
Ada Ao, Heiman Wang, Sushama Kamarajugadda, and Jianrong Lu
Proc Natl Acad Sci U S A. 2008 June 3; 105(22): 7821–7826. doi: 10.1073/pnas.0711677105.
PMCID: PMC2409389
Next generation of adeno-associated virus 2 vectors: Point mutations in tyrosines lead to high-efficiency transduction at lower doses
Li Zhong, Baozheng Li, Cathryn S. Mah, Lakshmanan Govindasamy, Mavis Agbandje-McKenna, Mario Cooper, Roland W. Herzog, Irene Zolotukhin, Kenneth H. Warrington, Jr., Kirsten A. Weigel-Van Aken, Jacqueline A. Hobbs, Sergei Zolotukhin, Nicholas Muzyczka, and Arun Srivastava
Proc Natl Acad Sci U S A. 2008 June 3; 105(22): 7827–7832. doi: 10.1073/pnas.0802866105.
PMCID: PMC2402387
Cidea is associated with lipid droplets and insulin sensitivity in humans
Vishwajeet Puri, Srijana Ranjit, Silvana Konda, Sarah M. C. Nicoloro, Juerg Straubhaar, Anil Chawla, My Chouinard, Chenyi Lin, Alison Burkart, Silvia Corvera, Richard A. Perugini, and Michael P. Czech
Proc Natl Acad Sci U S A. 2008 June 3; 105(22): 7833–7838. doi: 10.1073/pnas.0802063105.
PMCID: PMC2409392
From the Cover:
Coordinated regulation of transcription factors through Notch2 is an important mediator of mast cell fate
Mamiko Sakata-Yanagimoto, Etsuko Nakagami-Yamaguchi, Toshiki Saito, Keiki Kumano, Koji Yasutomo, Seishi Ogawa, Mineo Kurokawa, and Shigeru Chiba
Proc Natl Acad Sci U S A. 2008 June 3; 105(22): 7839–7844. doi: 10.1073/pnas.0801074105.
PMCID: PMC2409420
Microbiology
Immunity to a salivary protein of a sand fly vector protects against the fatal outcome of visceral leishmaniasis in a hamster model
Regis Gomes, Clarissa Teixeira, Maria Jânia Teixeira, Fabiano Oliveira, Maria José Menezes, Claire Silva, Camila I. de Oliveira, Jose C. Miranda, Dia-Eldin Elnaiem, Shaden Kamhawi, Jesus G. Valenzuela, and Cláudia I. Brodskyn
Proc Natl Acad Sci U S A. 2008 June 3; 105(22): 7845–7850. doi: 10.1073/pnas.0712153105.
PMCID: PMC2397325
A dicarboxylate/4-hydroxybutyrate autotrophic carbon assimilation cycle in the hyperthermophilic Archaeum Ignicoccus hospitalis
Harald Huber, Martin Gallenberger, Ulrike Jahn, Eva Eylert, Ivan A. Berg, Daniel Kockelkorn, Wolfgang Eisenreich, and Georg Fuchs
Proc Natl Acad Sci U S A. 2008 June 3; 105(22): 7851–7856. doi: 10.1073/pnas.0801043105.
PMCID: PMC2409403
Population structure of the genes encoding the polymorphic Plasmodium falciparum apical membrane antigen 1: Implications for vaccine design
Junhui Duan, Jianbing Mu, Mahamadou Ali Thera, Deirdre Joy, Sergei L. Kosakovsky Pond, David Diemert, Carole Long, Hong Zhou, Kazutoyo Miura, Amed Ouattara, Amagana Dolo, Ogobara Doumbo, Xin-zhuan Su, and Louis Miller
Proc Natl Acad Sci U S A. 2008 June 3; 105(22): 7857–7862. doi: 10.1073/pnas.0802328105.
PMCID: PMC2409418
Neuroscience
Place cell firing correlates with memory deficits and amyloid plaque burden in Tg2576 Alzheimer mouse model
Francesca Cacucci, Ming Yi, Thomas J. Wills, Paul Chapman, and John O'Keefe
Proc Natl Acad Sci U S A. 2008 June 3; 105(22): 7863–7868. doi: 10.1073/pnas.0802908105.
PMCID: PMC2396558
Functional significance of axonal Kv7 channels in hippocampal pyramidal neurons
Mala M. Shah, Michele Migliore, Ignacio Valencia, Edward C. Cooper, and David A. Brown
Proc Natl Acad Sci U S A. 2008 June 3; 105(22): 7869–7874. doi: 10.1073/pnas.0802805105.
PMCID: PMC2408483
Complexins facilitate neurotransmitter release at excitatory and inhibitory synapses in mammalian central nervous system
Mingshan Xue, Alicja Stradomska, Hongmei Chen, Nils Brose, Weiqi Zhang, Christian Rosenmund, and Kerstin Reim
Proc Natl Acad Sci U S A. 2008 June 3; 105(22): 7875–7880. doi: 10.1073/pnas.0803012105.
PMCID: PMC2409395
Plant Biology
An original adaptation of photosynthesis in the marine green alga Ostreococcus
Pierre Cardol, Benjamin Bailleul, Fabrice Rappaport, Evelyne Derelle, Daniel Béal, Cécile Breyton, Shaun Bailey, Francis André Wollman, Arthur Grossman, Hervé Moreau, and Giovanni Finazzi
Proc Natl Acad Sci U S A. 2008 June 3; 105(22): 7881–7886. doi: 10.1073/pnas.0802762105.
PMCID: PMC2409423
Independent origins of syringyl lignin in vascular plants
Jing-Ke Weng, Xu Li, Jake Stout, and Clint Chapple
Proc Natl Acad Sci U S A. 2008 June 3; 105(22): 7887–7892. doi: 10.1073/pnas.0801696105.
PMCID: PMC2409400
Corrections
Editorial Expression of Concern and Corrections
Randy Schekman
Proc Natl Acad Sci U S A. 2008 June 3; 105(22): 7893. doi: 10.1073/pnas.0803890105.
PMCID: PMC2409379
Corrects: Stefano Fiorucci, et al. NCX-1000, a NO-releasing derivative of ursodeoxycholic acid, selectively delivers NO to the liver and protects against development of portal hypertension. Proc Natl Acad Sci U S A. 2001 July 17; 98(15): 8897–8902.
Correction for Kang et al., Salt tolerance of Arabidopsis thaliana requires maturation of N-glycosylated proteins in the Golgi apparatus
Proc Natl Acad Sci U S A. 2008 June 3; 105(22): 7893. doi: 10.1073/pnas.0803745105.
PMCID: PMC2409429
Corrects: Jae Sook Kang, et al. Salt tolerance of Arabidopsis thaliana requires maturation of N-glycosylated proteins in the Golgi apparatus. Proc Natl Acad Sci U S A. 2008 April 15; 105(15): 5933–5938.
Correction for Chen et al., Organization of the core structure of the postsynaptic density
Proc Natl Acad Sci U S A. 2008 June 3; 105(22): 7893. doi: 10.1073/pnas.0803900105.
PMCID: PMC2409428
Corrects: Xiaobing Chen, et al. Organization of the core structure of the postsynaptic density. Proc Natl Acad Sci U S A. 2008 March 18; 105(11): 4453–4458.
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