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Volume 12(8);  August 2003
Accelerated Communication
Identification of protein biochemical functions by similarity search using the molecular surface database eF-site
Kengo Kinoshita and Haruki Nakamura
Protein Sci. 2003 August; 12(8): 1589–1595.
PMCID: PMC2323945
Articles
Competitive binding of fatty acids and the fluorescent probe 1-8-anilinonaphthalene sulfonate to bovine β-lactoglobulin
Maddalena Collini, Laura D’Alfonso, Henriette Molinari, Laura Ragona, Maddalena Catalano, and Giancarlo Baldini
Protein Sci. 2003 August; 12(8): 1596–1603.
PMCID: PMC2323946
Exploring the nonlinear geometry of protein homology
Michael A. Farnum, Huafeng Xu, and Dimitris K. Agrafiotis
Protein Sci. 2003 August; 12(8): 1604–1612.
PMCID: PMC2323947
Surface plasmon resonance studies of wild-type and AV77 tryptophan repressor resolve ambiguities in super-repressor activity
Michael D. Finucane and Oleg Jardetzky
Protein Sci. 2003 August; 12(8): 1613–1620.
PMCID: PMC2323948
Crystal structure of the conserved protein TT1542 from Thermus thermophilus HB8
Noriko Handa, Takaho Terada, Yuki Kamewari, Hiroaki Hamana, Jeremy R.H. Tame, Sam-Yong Park, Kengo Kinoshita, Motonori Ota, Haruki Nakamura, Seiki Kuramitsu, Mikako Shirouzu, and Shigeyuki Yokoyama
Protein Sci. 2003 August; 12(8): 1621–1632.
PMCID: PMC2323949
Identification of residues critical for catalysis in a class C β-lactamase by combinatorial scanning mutagenesis
Shalom D. Goldberg, William Iannuccilli, Tuan Nguyen, Jingyue Ju, and Virginia W. Cornish
Protein Sci. 2003 August; 12(8): 1633–1645.
PMCID: PMC2323950
The role of geometric complementarity in secondary structure packing: A systematic docking study
Sulin Jiang, Andrei Tovchigrechko, and Ilya A. Vakser
Protein Sci. 2003 August; 12(8): 1646–1651.
PMCID: PMC2323951
Prediction of lipoprotein signal peptides in Gram-negative bacteria
Agnieszka S. Juncker, Hanni Willenbrock, Gunnar von Heijne, Søren Brunak, Henrik Nielsen, and Anders Krogh
Protein Sci. 2003 August; 12(8): 1652–1662.
PMCID: PMC2323952
Stability of a 24-meric homopolymer: Comparative studies of assembly-defective mutants of Rhodobacter capsulatus bacterioferritin and the native protein
Mehmet A. Kilic, Stephen Spiro, and Geoffrey R. Moore
Protein Sci. 2003 August; 12(8): 1663–1674.
PMCID: PMC2323953
Amyloid-forming peptides selected proteolytically from phage display library
Katarzyna Koscielska-Kasprzak and Jacek Otlewski
Protein Sci. 2003 August; 12(8): 1675–1685.
PMCID: PMC2323954
Library analysis of SCHEMA-guided protein recombination
Michelle M. Meyer, Jonathan J. Silberg, Christopher A. Voigt, Jeffrey B. Endelman, Stephen L. Mayo, Zhen-Gang Wang, and Frances H. Arnold
Protein Sci. 2003 August; 12(8): 1686–1693.
PMCID: PMC2323955
The characterization of mutant Bacillus subtilis adenylosuccinate lyases corresponding to severe human adenylosuccinate lyase deficiencies
Jennifer Brosius Palenchar, Jennifer M. Crocco, and Roberta F. Colman
Protein Sci. 2003 August; 12(8): 1694–1705.
PMCID: PMC2323956
Structure-based phenotyping predicts HIV-1 protease inhibitor resistance
Mark D. Shenderovich, Ron M. Kagan, Peter N.R. Heseltine, and Kal Ramnarayan
Protein Sci. 2003 August; 12(8): 1706–1718.
PMCID: PMC2323957
Folding subdomains of thioredoxin characterized by native-state hydrogen exchange
Nidhi Bhutani and Jayant B. Udgaonkar
Protein Sci. 2003 August; 12(8): 1719–1731.
PMCID: PMC2323958
Determination of membrane protein stability via thermodynamic coupling of folding to thiol–disulfide interchange
Lidia Cristian, James D. Lear, and William F. DeGrado
Protein Sci. 2003 August; 12(8): 1732–1740.
PMCID: PMC2323959
Atomic resolution analysis of the catalytic site of an aspartic proteinase and an unexpected mode of binding by short peptides
Peter T. Erskine, Leighton Coates, Sanjay Mall, Raj S. Gill, Steve P. Wood, Dean A.A. Myles, and Jon. B. Cooper
Protein Sci. 2003 August; 12(8): 1741–1749.
PMCID: PMC2323960
Exploring the conformational space of membrane protein folds matching distance constraints
Jean-Loup Faulon, Ken Sale, and Malin Young
Protein Sci. 2003 August; 12(8): 1750–1761.
PMCID: PMC2323961
Methylation and carbamylation of human γ-crystallins
Veniamin N. Lapko, David L. Smith, and Jean B. Smith
Protein Sci. 2003 August; 12(8): 1762–1774.
PMCID: PMC2323962
Identification of S-sulfonation and S-thiolation of a novel transthyretin Phe33Cys variant from a patient diagnosed with familial transthyretin amyloidosis
Amareth Lim, Tatiana Prokaeva, Mark E. McComb, Lawreen H. Connors, Martha Skinner, and Catherine E. Costello
Protein Sci. 2003 August; 12(8): 1775–1785.
PMCID: PMC2323963
High-yield expression of isotopically labeled peptides for use in NMR studies
Darrin A. Lindhout, Angela Thiessen, Dean Schieve, and Brian D. Sykes
Protein Sci. 2003 August; 12(8): 1786–1791.
PMCID: PMC2323964
Mapping Hsp47 binding site(s) using CNBr peptides derived from type I and type II collagen
Christy A. Thomson, Ruggero Tenni, and Vettai S. Ananthanarayanan
Protein Sci. 2003 August; 12(8): 1792–1800.
PMCID: PMC2323965
For the Record
Fast protein folding on downhill energy landscape
Andrea Cavalli, Urs Haberthür, Emanuele Paci, and Amedeo Caflisch
Protein Sci. 2003 August; 12(8): 1801–1803.
PMCID: PMC2323966
Glucoamylase-like domains in the α- and β-subunits of phosphorylase kinase
Mark J. Pallen
Protein Sci. 2003 August; 12(8): 1804–1807.
PMCID: PMC2323967
Correction
CORRECTION
Protein Sci. 2003 August; 12(8): 1808.
PMCID: PMC2323968
Corrects: CORRECTION. Protein Sci. 2003 August; 12(8): 1808.
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