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Volume 16(9);  September 2007
Review
The structural and functional diversity of Hsp70 proteins from Plasmodium falciparum
Addmore Shonhai, Aileen Boshoff, and Gregory L. Blatch
Protein Sci. 2007 September; 16(9): 1803–1818. doi: 10.1110/ps.072918107.
PMCID: PMC2206976
Articles
Docking and homology modeling explain inhibition of the human vesicular glutamate transporters
Jonas Almqvist, Yafei Huang, Aatto Laaksonen, Da-Neng Wang, and Sven Hovmöller
Protein Sci. 2007 September; 16(9): 1819–1829. doi: 10.1110/ps.072944707.
PMCID: PMC2206968
Sm-like protein Hfq: Location of the ATP-binding site and the effect of ATP on Hfq–RNA complexes
Veronique Arluison, Shravan K. Mutyam, Cameron Mura, Sergio Marco, and Maxim V. Sukhodolets
Protein Sci. 2007 September; 16(9): 1830–1841. doi: 10.1110/ps.072883707.
PMCID: PMC2206964
Probing the local conformational change of α1-antitrypsin
Je-Hyun Baek, Hana Im, Un-Beom Kang, Ki Moon Seong, Cheolju Lee, Joon Kim, and Myeong-Hee Yu
Protein Sci. 2007 September; 16(9): 1842–1850. doi: 10.1110/ps.072911607.
PMCID: PMC2206966
How similar are enzyme active site geometries derived from quantum mechanical theozymes to crystal structures of enzyme-inhibitor complexes? Implications for enzyme design
Jason DeChancie, Fernando R. Clemente, Adam J.T. Smith, Hakan Gunaydin, Yi-Lei Zhao, Xiyun Zhang, and K.N. Houk
Protein Sci. 2007 September; 16(9): 1851–1866. doi: 10.1110/ps.072963707.
PMCID: PMC2206971
Patterns of protein–protein interactions in salt solutions and implications for protein crystallization
André C. Dumetz, Ann M. Snellinger-O'Brien, Eric W. Kaler, and Abraham M. Lenhoff
Protein Sci. 2007 September; 16(9): 1867–1877. doi: 10.1110/ps.072957907.
PMCID: PMC2206983
The structures of transcription factor CGL2947 from Corynebacterium glutamicum in two crystal forms: A novel homodimer assembling and the implication for effector-binding mode
Yong-Gui Gao, Min Yao, Hiroshi Itou, Yong Zhou, and Isao Tanaka
Protein Sci. 2007 September; 16(9): 1878–1886. doi: 10.1110/ps.072976907.
PMCID: PMC2206975
Amino-acid interactions in psychrophiles, mesophiles, thermophiles, and hyperthermophiles: Insights from the quasi-chemical approximation
Richard A. Goldstein
Protein Sci. 2007 September; 16(9): 1887–1895. doi: 10.1110/ps.072947007.
PMCID: PMC2206978
The crystal structure of M. leprae ML2640c defines a large family of putative S-adenosylmethionine-dependent methyltransferases in mycobacteria
Martin Graña, Ahmed Haouz, Alejandro Buschiazzo, Isabelle Miras, Annemarie Wehenkel, Vincent Bondet, William Shepard, Francis Schaeffer, Stewart T. Cole, and Pedro M. Alzari
Protein Sci. 2007 September; 16(9): 1896–1904. doi: 10.1110/ps.072982707.
PMCID: PMC2206960
Constraining specificity in the N-domain of tissue inhibitor of metalloproteinases-1; gelatinase-selective inhibitors
Asmaa B. Hamze, Shuo Wei, Harinath Bahudhanapati, Smitha Kota, K. Ravi Acharya, and Keith Brew
Protein Sci. 2007 September; 16(9): 1905–1913. doi: 10.1110/ps.072978507.
PMCID: PMC2206984
Solution structure of Ca2+-free rat β-parvalbumin (oncomodulin)
Michael T. Henzl and John J. Tanner
Protein Sci. 2007 September; 16(9): 1914–1926. doi: 10.1110/ps.072837307.
PMCID: PMC2206965
Theoretical study of the partial molar volume change associated with the pressure-induced structural transition of ubiquitin
Takashi Imai, Shusaku Ohyama, Andriy Kovalenko, and Fumio Hirata
Protein Sci. 2007 September; 16(9): 1927–1933. doi: 10.1110/ps.072909007.
PMCID: PMC2206979
Solution structure of recombinant somatomedin B domain from vitronectin produced in Pichia pastoris
Magnus Kjaergaard, Henrik Gårdsvoll, Daniel Hirschberg, Steen Nielbo, Anand Mayasundari, Cynthia B. Peterson, Anna Jansson, Thomas J.D. Jørgensen, Flemming M. Poulsen, and Michael Ploug
Protein Sci. 2007 September; 16(9): 1934–1945. doi: 10.1110/ps.072949607.
PMCID: PMC2206967
Branching in the sequential folding pathway of cytochrome c
Mallela M.G. Krishna, Haripada Maity, Jon N. Rumbley, and S. Walter Englander
Protein Sci. 2007 September; 16(9): 1946–1956. doi: 10.1110/ps.072922307.
PMCID: PMC2206985
Destabilization of human glycine N-methyltransferase by H176N mutation
Zigmund Luka, Svetlana Pakhomova, Yury Luka, Marcia E. Newcomer, and Conrad Wagner
Protein Sci. 2007 September; 16(9): 1957–1964. doi: 10.1110/ps.072921507.
PMCID: PMC2206963
The mutability of enzyme active-site shape determinants
Brian G. Miller
Protein Sci. 2007 September; 16(9): 1965–1968. doi: 10.1110/ps.073040307.
PMCID: PMC2206970
Structure–activity study of the antibacterial peptide fallaxin
Sandra L. Nielsen, Niels Frimodt-Møller, Birthe B. Kragelund, and Paul R. Hansen
Protein Sci. 2007 September; 16(9): 1969–1976. doi: 10.1110/ps.072966007.
PMCID: PMC2206974
Comparing the structure and dynamics of phospholamban pentamer in its unphosphorylated and pseudo-phosphorylated states
Kirill Oxenoid, Amanda J. Rice, and James J. Chou
Protein Sci. 2007 September; 16(9): 1977–1983. doi: 10.1110/ps.072975107.
PMCID: PMC2206959
Molecular plasticity of β-catenin: New insights from single-molecule measurements and MD simulation
Monica Ritco-Vonsovici, Abdessamad Ababou, and Michael Horton
Protein Sci. 2007 September; 16(9): 1984–1998. doi: 10.1110/ps.072773007.
PMCID: PMC2206973
Loopholes and missing links in protein modeling
Karen A. Rossi, Carolyn A. Weigelt, Akbar Nayeem, and Stanley R. Krystek, Jr
Protein Sci. 2007 September; 16(9): 1999–2012. doi: 10.1110/ps.072887807.
PMCID: PMC2206982
Inhibition of NF-κB activation with designed ankyrin-repeat proteins targeting the ubiquitin-binding/oligomerization domain of NEMO
Emanuel Wyler, Monika Kaminska, Yves-Marie Coïc, Françoise Baleux, Michel Véron, and Fabrice Agou
Protein Sci. 2007 September; 16(9): 2013–2022. doi: 10.1110/ps.072924907.
PMCID: PMC2206981
Production of selenomethionyl-derivatized proteins in baculovirus-infected insect cells
Ciarán N. Cronin, Kheng B. Lim, and Joe Rogers
Protein Sci. 2007 September; 16(9): 2023–2029. doi: 10.1110/ps.072931407.
PMCID: PMC2206972
Modeling mutations in protein structures
Eric Feyfant, Andrej Sali, and András Fiser
Protein Sci. 2007 September; 16(9): 2030–2041. doi: 10.1110/ps.072855507.
PMCID: PMC2206969
Modeling fatty acid delivery from intestinal fatty acid binding protein to a membrane
Maja Mihajlovic and Themis Lazaridis
Protein Sci. 2007 September; 16(9): 2042–2055. doi: 10.1110/ps.072875307.
PMCID: PMC2206986
Total chemical synthesis and biophysical characterization of the minimal isoform of the KChIP2 potassium channel regulatory subunit
Sudarshan Rajagopal and Stephen B.H. Kent
Protein Sci. 2007 September; 16(9): 2056–2064. doi: 10.1110/ps.072876107.
PMCID: PMC2206977
Conductance and amantadine binding of a pore formed by a lysine-flanked transmembrane domain of SARS coronavirus envelope protein
Jaume Torres, Uma Maheswari, Krupakar Parthasarathy, Lifang Ng, Ding Xiang Liu, and Xiandi Gong
Protein Sci. 2007 September; 16(9): 2065–2071. doi: 10.1110/ps.062730007.
PMCID: PMC2206980
Protein Structure Reports
The solution structure of the ZnF UBP domain of USP33/VDU1
Mark D. Allen and Mark Bycroft
Protein Sci. 2007 September; 16(9): 2072–2075. doi: 10.1110/ps.072967807.
PMCID: PMC2206988
Apo-nitrophorin 4 at atomic resolution
Angela M. Amoia and William R. Montfort
Protein Sci. 2007 September; 16(9): 2076–2081. doi: 10.1110/ps.072981907.
PMCID: PMC2206961
Biosynthesis of isoprenoids in plants: Structure of the 2C-methyl-d-erithrytol 2,4-cyclodiphosphate synthase from Arabidopsis thaliana. Comparison with the bacterial enzymes
Barbara M. Calisto, Jordi Perez-Gil, Maria Bergua, Jordi Querol-Audi, Ignacio Fita, and Santiago Imperial
Protein Sci. 2007 September; 16(9): 2082–2088. doi: 10.1110/ps.072972807.
PMCID: PMC2206962
Correction
CORRECTION
Protein Sci. 2007 September; 16(9): 2089.
PMCID: PMC2206987
Corrects: Gabriel Cornilescu, et al. Solution structure of a small protein containing a fluorinated side chain in the core. Protein Sci. 2007 January; 16(1): 14–19.
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