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Volume 3;  2006
Case Reports
Epstein-barr virus induced cellular changes in nasal mucosa
Matteo Gelardi, Marilena Tomaiuolo, Michele Cassano, Gaspare Besozzi, Maria Luisa Fiorella, Agata Calvario, Maria Antonia Castellano, and Pasquale Cassano
Virol J. 2006; 3: 6. Published online 2006 February 1. doi: 10.1186/1743-422X-3-6.
PMCID: PMC1388193
Crimean-Congo Haemorrhagic Fever in Kosova : a fatal case report
Salih Ahmeti and Lul Raka
Virol J. 2006; 3: 85. Published online 2006 October 12. doi: 10.1186/1743-422X-3-85.
PMCID: PMC1624825
Debate
Asymptomatic infection with highly pathogenic avian influenza H5N1 in wild birds: how sound is the evidence?
Chris J Feare and Maï Yasué
Virol J. 2006; 3: 96. Published online 2006 November 17. doi: 10.1186/1743-422X-3-96.
PMCID: PMC1661592
Methodology
A broadly applicable method to characterize large DNA viruses and adenoviruses based on the DNA polymerase gene
Larry A Hanson, Mary R Rudis, Marcia Vasquez-Lee, and Roy D Montgomery
Virol J. 2006; 3: 28. Published online 2006 April 11. doi: 10.1186/1743-422X-3-28.
PMCID: PMC1459111
Application of functional genomics to the chimeric mouse model of HCV infection: optimization of microarray protocols and genomics analysis
Kathie-Anne Walters, Michael A Joyce, Jill C Thompson, Sean Proll, James Wallace, Maria W Smith, Jeff Furlong, D Lorne Tyrrell, and Michael G Katze
Virol J. 2006; 3: 37. Published online 2006 May 25. doi: 10.1186/1743-422X-3-37.
PMCID: PMC1482685
Quantitative profiling of housekeeping and Epstein-Barr virus gene transcription in Burkitt lymphoma cell lines using an oligonucleotide microarray
Michele Bernasconi, Christoph Berger, Jürg A Sigrist, Athos Bonanomi, Jens Sobek, Felix K Niggli, and David Nadal
Virol J. 2006; 3: 43. Published online 2006 June 6. doi: 10.1186/1743-422X-3-43.
PMCID: PMC1533810
Identification and classification of human cytomegalovirus capsids in textured electron micrographs using deformed template matching
Martin Ryner, Jan-Olov Strömberg, Cecilia Söderberg-Nauclér, and Mohammed Homman-Loudiyi
Virol J. 2006; 3: 57. Published online 2006 August 18. doi: 10.1186/1743-422X-3-57.
PMCID: PMC1563456
New low-viscosity overlay medium for viral plaque assays
Mikhail Matrosovich, Tatyana Matrosovich, Wolfgang Garten, and Hans-Dieter Klenk
Virol J. 2006; 3: 63. Published online 2006 August 31. doi: 10.1186/1743-422X-3-63.
PMCID: PMC1564390
Natural products that reduce rotavirus infectivity identified by a cell-based moderate-throughput screening assay
Mark E Shaneyfelt, Anna D Burke, Joel W Graff, Mark A Jutila, and Michele E Hardy
Virol J. 2006; 3: 68. Published online 2006 September 1. doi: 10.1186/1743-422X-3-68.
PMCID: PMC1564392
Research
The 3' sequences required for incorporation of an engineered ssRNA into the Reovirus genome
Michael R Roner and Joanne Roehr
Virol J. 2006; 3: 1. Published online 2006 January 3. doi: 10.1186/1743-422X-3-1.
PMCID: PMC1352349
Shell Vial culture Assay for the rapid diagnosis of Japanese encephalitis, West Nile and Dengue-2 viral encephalitis
Rangaiah S Jayakeerthi, Raghava V Potula, S Srinivasan, and S Badrinath
Virol J. 2006; 3: 2. Published online 2006 January 6. doi: 10.1186/1743-422X-3-2.
PMCID: PMC1360082
Analysis of the human cytomegalovirus genomic region from UL146 through UL147A reveals sequence hypervariability, genotypic stability, and overlapping transcripts
Nell S Lurain, Andrea M Fox, Heather M Lichy, Sangeeta M Bhorade, Carl F Ware, Diana D Huang, Sau-Ping Kwan, Edward R Garrity, and Sunwen Chou
Virol J. 2006; 3: 4. Published online 2006 January 12. doi: 10.1186/1743-422X-3-4.
PMCID: PMC1360065
Use of recombinant lentivirus pseudotyped with vesicular stomatitis virus glycoprotein G for efficient generation of human anti-cancer chimeric T cells by transduction of human peripheral blood lymphocytes in vitro
Anthony Simmons, Robert P Whitehead, Andrey A Kolokoltsov, and Robert A Davey
Virol J. 2006; 3: 8. Published online 2006 February 28. doi: 10.1186/1743-422X-3-8.
PMCID: PMC1413513
Cyclic cidofovir (cHPMPC) prevents congenital cytomegalovirus infection in a guinea pig model
Mark R Schleiss, Jodi L Anderson, and Alistair McGregor
Virol J. 2006; 3: 9. Published online 2006 March 1. doi: 10.1186/1743-422X-3-9.
PMCID: PMC1525182
Pox proteomics: mass spectrometry analysis and identification of Vaccinia virion proteins
Jennifer D Yoder, Tsefang S Chen, Cliff R Gagnier, Srilakshmi Vemulapalli, Claudia S Maier, and Dennis E Hruby
Virol J. 2006; 3: 10. Published online 2006 March 1. doi: 10.1186/1743-422X-3-10.
PMCID: PMC1540416
Genetic variability of the envelope gene of Type D simian retrovirus-2 (SRV-2) subtypes associated with SAIDS-related retroperitoneal fibromatosis in different macaque species
Jeannette Philipp-Staheli, Taya Marquardt, Margaret E Thouless, A Gregory Bruce, Richard F Grant, Che-Chung Tsai, and Timothy M Rose
Virol J. 2006; 3: 11. Published online 2006 March 6. doi: 10.1186/1743-422X-3-11.
PMCID: PMC1450265
Panicovirus accumulation is governed by two membrane-associated proteins with a newly identified conserved motif that contributes to pathogenicity
Jeffrey S Batten, Massimo Turina, and Karen-Beth G Scholthof
Virol J. 2006; 3: 12. Published online 2006 March 8. doi: 10.1186/1743-422X-3-12.
PMCID: PMC1421387
A phosphorylation map of the bovine papillomavirus E1 helicase
Michael R Lentz, Stanley M Stevens, Jr, Joshua Raynes, and Nancy Elkhoury
Virol J. 2006; 3: 13. Published online 2006 March 8. doi: 10.1186/1743-422X-3-13.
PMCID: PMC1450263
Multicistronic lentiviral vectors containing the FMDV 2A cleavage factor demonstrate robust expression of encoded genes at limiting MOI
Dhanalakshmi Chinnasamy, Michael D Milsom, James Shaffer, James Neuenfeldt, Aimen F Shaaban, Geoffrey P Margison, Leslie J Fairbairn, and Nachimuthu Chinnasamy
Virol J. 2006; 3: 14. Published online 2006 March 15. doi: 10.1186/1743-422X-3-14.
PMCID: PMC1459112
Genome comparison of two Coccolithoviruses
Michael J Allen, Declan C Schroeder, Andrew Donkin, Katharine J Crawfurd, and William H Wilson
Virol J. 2006; 3: 15. Published online 2006 March 22. doi: 10.1186/1743-422X-3-15.
PMCID: PMC1440845
Inhibition of cytokine gene expression and induction of chemokine genes in non-lymphatic cells infected with SARS coronavirus
Martin Spiegel and Friedemann Weber
Virol J. 2006; 3: 17. Published online 2006 March 29. doi: 10.1186/1743-422X-3-17.
PMCID: PMC1444920
Evaluation of three Polymerase chain reaction tests targeting morphological transforming region II, UL-83 gene and glycoprotein O gene for the detection of Human Cytomegalovirus genome in clinical specimens of immunocompromised patients in Chennai, India
P Sowmya, HN Madhavan, and KL Therese
Virol J. 2006; 3: 20. Published online 2006 March 30. doi: 10.1186/1743-422X-3-20.
PMCID: PMC1435869
Amphotropic murine leukemia virus is preferentially attached to cholesterol-rich microdomains after binding to mouse fibroblasts
Christiane Beer and Lene Pedersen
Virol J. 2006; 3: 21. Published online 2006 April 2. doi: 10.1186/1743-422X-3-21.
PMCID: PMC1483818
Application of real-time PCR to quantify hepatitis B virus DNA in chronic carriers in The Gambia
Maimuna E Mendy, Steve Kaye, Marianne van der Sande, Pura Rayco-Solon, Pauline A Waight, Deborah Shipton, Dorka Awi, Paul Snell, Hilton Whittle, and Samuel J McConkey
Virol J. 2006; 3: 23. Published online 2006 April 4. doi: 10.1186/1743-422X-3-23.
PMCID: PMC1482686
Predicting the subcellular localization of viral proteins within a mammalian host cell
MS Scott, R Oomen, DY Thomas, and MT Hallett
Virol J. 2006; 3: 24. Published online 2006 April 4. doi: 10.1186/1743-422X-3-24.
PMCID: PMC1475561
Expression of HIV receptors, alternate receptors and co-receptors on tonsillar epithelium: implications for HIV binding and primary oral infection
Renu B Kumar, Diane M Maher, Mark C Herzberg, and Peter J Southern
Virol J. 2006; 3: 25. Published online 2006 April 6. doi: 10.1186/1743-422X-3-25.
PMCID: PMC1459853
Inhibition of histone deacetylation in 293GPG packaging cell line improves the production of self-inactivating MLV-derived retroviral vectors
Diana E Jaalouk, Milena Crosato, Pnina Brodt, and Jacques Galipeau
Virol J. 2006; 3: 27. Published online 2006 April 7. doi: 10.1186/1743-422X-3-27.
PMCID: PMC1488828
Membrane-associated heparan sulfate is not required for rAAV-2 infection of human respiratory epithelia
Michael P Boyle, Raymond A Enke, Jeffrey B Reynolds, Peter J Mogayzel, Jr, William B Guggino, and Pamela L Zeitlin
Virol J. 2006; 3: 29. Published online 2006 April 22. doi: 10.1186/1743-422X-3-29.
PMCID: PMC1459113
Genetic diversity among five T4-like bacteriophages
James M Nolan, Vasiliy Petrov, Claire Bertrand, Henry M Krisch, and Jim D Karam
Virol J. 2006; 3: 30. Published online 2006 May 23. doi: 10.1186/1743-422X-3-30.
PMCID: PMC1524935
Effect of Ebola virus proteins GP, NP and VP35 on VP40 VLP morphology
Reed F Johnson, Peter Bell, and Ronald N Harty
Virol J. 2006; 3: 31. Published online 2006 May 23. doi: 10.1186/1743-422X-3-31.
PMCID: PMC1502131
Combined fluticasone propionate and salmeterol reduces RSV infection more effectively than either of them alone in allergen-sensitized mice
Rajeswari Singam, Prasanna K Jena, Sumita Behera, Gary R Hellermann, Richard F Lockey, Dennis Ledford, and Shyam S Mohapatra
Virol J. 2006; 3: 32. Published online 2006 May 23. doi: 10.1186/1743-422X-3-32.
PMCID: PMC1488829
VPg of murine norovirus binds translation initiation factors in infected cells
Katie F Daughenbaugh, Christiane E Wobus, and Michele E Hardy
Virol J. 2006; 3: 33. Published online 2006 May 23. doi: 10.1186/1743-422X-3-33.
PMCID: PMC1481632
Contribution of cysteine residues in the extracellular domain of the F protein of human respiratory syncytial virus to its function
Nicole D Day, Patrick J Branigan, Changbao Liu, Lester L Gutshall, Jianquan Luo, José A Melero, Robert T Sarisky, and Alfred M Del Vecchio
Virol J. 2006; 3: 34. Published online 2006 May 24. doi: 10.1186/1743-422X-3-34.
PMCID: PMC1540417
The temperature arrested intermediate of virus-cell fusion is a functional step in HIV infection
Hamani I Henderson and Thomas J Hope
Virol J. 2006; 3: 36. Published online 2006 May 25. doi: 10.1186/1743-422X-3-36.
PMCID: PMC1482684
Expression and processing of the Hepatitis E virus ORF1 nonstructural polyprotein
Deepak Sehgal, Saijo Thomas, Mahua Chakraborty, and Shahid Jameel
Virol J. 2006; 3: 38. Published online 2006 May 26. doi: 10.1186/1743-422X-3-38.
PMCID: PMC1481634
Isolation and characterization of a new simian rotavirus, YK-1
Larry E Westerman, Baoming Jiang, Harold M McClure, Lauren J Snipes-Magaldi, Dixie D Griffin, Gary Shin, Jon R Gentsch, and Roger I Glass
Virol J. 2006; 3: 40. Published online 2006 May 31. doi: 10.1186/1743-422X-3-40.
PMCID: PMC1524728
The role of single N-glycans in proteolytic processing and cell surface transport of the Lassa virus glycoprotein GP-C
Robert Eichler, Oliver Lenz, Wolfgang Garten, and Thomas Strecker
Virol J. 2006; 3: 41. Published online 2006 May 31. doi: 10.1186/1743-422X-3-41.
PMCID: PMC1524727
Pathogenesis and vertical transmission of a transplacental rat cytomegalovirus
Hwei-San Loh, Mohd-Azmi Mohd-Lila, Sheikh-Omar Abdul-Rahman, and Lik-Jun Kiew
Virol J. 2006; 3: 42. Published online 2006 June 1. doi: 10.1186/1743-422X-3-42.
PMCID: PMC1500997
ICP0 antagonizes Stat 1-dependent repression of herpes simplex virus: implications for the regulation of viral latency
William P Halford, Carla Weisend, Jennifer Grace, Mark Soboleski, Daniel JJ Carr, John W Balliet, Yumi Imai, Todd P Margolis, and Bryan M Gebhardt
Virol J. 2006; 3: 44. Published online 2006 June 9. doi: 10.1186/1743-422X-3-44.
PMCID: PMC1557838
The synergistic effect of IFN-α and IFN-γ against HSV-2 replication in Vero cells is not interfered by the plant antiviral 1-cinnamoyl-3, 11-dihydroxymeliacarpin
Erina Petrera and Celia E Coto
Virol J. 2006; 3: 45. Published online 2006 June 13. doi: 10.1186/1743-422X-3-45.
PMCID: PMC1525181
Quantitative estimation of Nipah virus replication kinetics in vitro
Li-Yen Chang, AR Mohd Ali, Sharifah Syed Hassan, and Sazaly AbuBakar
Virol J. 2006; 3: 47. Published online 2006 June 19. doi: 10.1186/1743-422X-3-47.
PMCID: PMC1543632
Members of the Hyposoter didymator Ichnovirus repeat element gene family are differentially expressed in Spodoptera frugiperda
L Galibert, G Devauchelle, F Cousserans, J Rocher, P Cérutti, M Barat-Houari, P Fournier, and AN Volkoff
Virol J. 2006; 3: 48. Published online 2006 June 19. doi: 10.1186/1743-422X-3-48.
PMCID: PMC1539012
Measles viral load may reflect SSPE disease progression
M Kühne Simmonds , DWG Brown, and L Jin
Virol J. 2006; 3: 49. Published online 2006 June 21. doi: 10.1186/1743-422X-3-49.
PMCID: PMC1526435
The ability of flagellum-specific Proteus vulgaris bacteriophage PV22 to interact with Campylobacter jejuni flagella in culture
EL Zhilenkov, VM Popova, DV Popov, LY Zavalsky, EA Svetoch, NJ Stern, and BS Seal
Virol J. 2006; 3: 50. Published online 2006 June 27. doi: 10.1186/1743-422X-3-50.
PMCID: PMC1538592
Human Immunodeficiency Virus type 1 in seronegative infants born to HIV-1-infected mothers
Vázquez Pérez JA, Basualdo Sigales MC, Reyes-Terán G, Gudiño Rosales JC, and Soler Claudín C
Virol J. 2006; 3: 52. Published online 2006 June 29. doi: 10.1186/1743-422X-3-52.
PMCID: PMC1524729
Evidence of structural genomic region recombination in Hepatitis C virus
Juan Cristina and Rodney Colina
Virol J. 2006; 3: 53. Published online 2006 June 30. doi: 10.1186/1743-422X-3-53.
PMCID: PMC1533811
Characterization of the IFN-γ T-cell responses to immediate early antigens in humans with genital herpes
Ralph P Braun, Lendon G Payne, and Lichun Dong
Virol J. 2006; 3: 54. Published online 2006 July 5. doi: 10.1186/1743-422X-3-54.
PMCID: PMC1534022
Reemergence of dengue virus type-3 (subtype-III) in India: Implications for increased incidence of DHF & DSS
Paban Kumar Dash, Man Mohan Parida, Parag Saxena, Ajay Abhyankar, CP Singh, KN Tewari, Asha Mukul Jana, K Sekhar, and PV Lakshmana Rao
Virol J. 2006; 3: 55. Published online 2006 July 6. doi: 10.1186/1743-422X-3-55.
PMCID: PMC1559593
Arbidol: a broad-spectrum antiviral that inhibits acute and chronic HCV infection
Yury S Boriskin, Eve-Isabelle Pécheur, and Stephen J Polyak
Virol J. 2006; 3: 56. Published online 2006 July 19. doi: 10.1186/1743-422X-3-56.
PMCID: PMC1559594
Temperature sensitive influenza A virus genome replication results from low thermal stability of polymerase-cRNA complexes
Rosa M Dalton, Anne E Mullin, Maria Joao Amorim, Elizabeth Medcalf, Laurence S Tiley, and Paul Digard
Virol J. 2006; 3: 58. Published online 2006 August 25. doi: 10.1186/1743-422X-3-58.
PMCID: PMC1569369
Green fluorescent protein as a reporter of prion protein folding
Snezana Vasiljevic, Junyuan Ren, YongXiu Yao, Kevin Dalton, Catherine S Adamson, and Ian M Jones
Virol J. 2006; 3: 59. Published online 2006 August 29. doi: 10.1186/1743-422X-3-59.
PMCID: PMC1560372
Involvement of intracellular free Ca2+ in enhanced release of herpes simplex virus by hydrogen peroxide
Emiko Arimoto, Soichi Iwai, Tetsuro Sumi, Yuzo Ogawa, and Yoshiaki Yura
Virol J. 2006; 3: 62. Published online 2006 August 31. doi: 10.1186/1743-422X-3-62.
PMCID: PMC1564391
Hepatitis C virus NS2 and NS3/4A proteins are potent inhibitors of host cell cytokine/chemokine gene expression
Pasi Kaukinen, Maarit Sillanpää, Sergei Kotenko, Rongtuan Lin, John Hiscott, Krister Melén, and Ilkka Julkunen
Virol J. 2006; 3: 66. Published online 2006 September 1. doi: 10.1186/1743-422X-3-66.
PMCID: PMC1569370
Circulating viral core and E1 antigen levels as supplemental markers for HCV Chronic hepatitis
Mostafa K El Awady, Yasmine S El Abd, Hussein A Shoeb, Ashraf A Tabll, Alaa El Din MS Hosny, Reem M El Shenawy, Khaled Atef, Noha G Bader El Din, and Mahmoud M Bahgat
Virol J. 2006; 3: 67. Published online 2006 September 1. doi: 10.1186/1743-422X-3-67.
PMCID: PMC1586018
The effects of N-terminal insertion into VSV-G of an scFv peptide
Hanna Dreja and Marc Piechaczyk
Virol J. 2006; 3: 69. Published online 2006 September 2. doi: 10.1186/1743-422X-3-69.
PMCID: PMC1564393
Genetic analysis of Thailand hantavirus in Bandicota indica trapped in Thailand
Jean-Pierre Hugot, Angelina Plyusnina, Vincent Herbreteau, Kirill Nemirov, Juha Laakkonen, Åke Lundkvist, Yupin Supputamongkol, Heikki Henttonen, and Alexander Plyusnin
Virol J. 2006; 3: 72. Published online 2006 September 5. doi: 10.1186/1743-422X-3-72.
PMCID: PMC1578555
Caveolin-1 interacts with the Gag precursor of murine leukaemia virus and modulates virus production
Zheng Yu, Christiane Beer, Mario Koester, and Manfred Wirth
Virol J. 2006; 3: 73. Published online 2006 September 6. doi: 10.1186/1743-422X-3-73.
PMCID: PMC1570462
Altered gene expression in asymptomatic SHIV-infected rhesus macaques (Macacca mulatta)
Erica E Carroll, Rasha Hammamieh, Nabarun Chakraborty, Aaron T Phillips, Stacy-Ann M Miller, and Marti Jett
Virol J. 2006; 3: 74. Published online 2006 September 6. doi: 10.1186/1743-422X-3-74.
PMCID: PMC1570341
High level expression of human epithelial β-defensins (hBD-1, 2 and 3) in papillomavirus induced lesions
Kong T Chong, Liangbin Xiang, Xiaohong Wang, Eunjoo L Jun, Long-fu Xi, and John M Schweinfurth
Virol J. 2006; 3: 75. Published online 2006 September 8. doi: 10.1186/1743-422X-3-75.
PMCID: PMC1579216
Localization studies of two white spot syndrome virus structural proteins VP51 and VP76
Chenglin Wu and Feng Yang
Virol J. 2006; 3: 76. Published online 2006 September 12. doi: 10.1186/1743-422X-3-76.
PMCID: PMC1586196
S1 gene sequence analysis of a nephropathogenic strain of avian infectious bronchitis virus in Egypt
Ahmed S Abdel-Moneim, Magdy F El-Kady, Brian S Ladman, and Jack Gelb, Jr
Virol J. 2006; 3: 78. Published online 2006 September 20. doi: 10.1186/1743-422X-3-78.
PMCID: PMC1592083
Observation of the low frequency vibrational modes of bacteriophage M13 in water by Raman spectroscopy
KT Tsen, Eric C Dykeman, Otto F Sankey, Nien-Tsung Lin, Shaw-Wei D Tsen, and Juliann G Kiang
Virol J. 2006; 3: 79. Published online 2006 September 22. doi: 10.1186/1743-422X-3-79.
PMCID: PMC1592082
HIV-1 designed to use different tRNAGln isoacceptors prefers to select tRNAThr for replication
Meng Li, Peter G Eipers, Na Ni, and Casey D Morrow
Virol J. 2006; 3: 80. Published online 2006 September 26. doi: 10.1186/1743-422X-3-80.
PMCID: PMC1592299
Analysis of in vitro replicated human hepatitis C virus (HCV) for the determination of genotypes and quasispecies
Dennis Revie, Michael O Alberti, Ravi S Braich, Nickolas Chelyapov, David Bayles, John G Prichard, and S Zaki Salahuddin
Virol J. 2006; 3: 81. Published online 2006 September 29. doi: 10.1186/1743-422X-3-81.
PMCID: PMC1609102
Discovery of significant variants containing large deletions in the 5'UTR of human hepatitis C virus (HCV)
Dennis Revie, Michael O Alberti, Ravi S Braich, David Bayles, John G Prichard, and S Zaki Salahuddin
Virol J. 2006; 3: 82. Published online 2006 September 29. doi: 10.1186/1743-422X-3-82.
PMCID: PMC1599722
Characterization of neutralizing epitopes within the major capsid protein of human papillomavirus type 33
Stefanie D Roth, Martin Sapp, Rolf E Streeck, and Hans-Christoph Selinka
Virol J. 2006; 3: 83. Published online 2006 October 2. doi: 10.1186/1743-422X-3-83.
PMCID: PMC1599721
Infection of human cytomegalovirus in cultured human gingival tissue
Rong Hai, Alice Chu, Hongjian Li, Sean Umamoto, Paul Rider, and Fenyong Liu
Virol J. 2006; 3: 84. Published online 2006 October 5. doi: 10.1186/1743-422X-3-84.
PMCID: PMC1617094
Vaccinia virus replication is not affected by APOBEC3 family members
Melanie Kremer, Yasemin Suezer, Yolanda Martinez-Fernandez, Carsten Münk, Gerd Sutter, and Barbara S Schnierle
Virol J. 2006; 3: 86. Published online 2006 October 19. doi: 10.1186/1743-422X-3-86.
PMCID: PMC1635045
Evidence of recombination in quasispecies populations of a Hepatitis C Virus patient undergoing anti-viral therapy
María P Moreno, Didier Casane, Lilia López, and Juan Cristina
Virol J. 2006; 3: 87. Published online 2006 October 24. doi: 10.1186/1743-422X-3-87.
PMCID: PMC1635042
Genomic sequence and analysis of a vaccinia virus isolate from a patient with a smallpox vaccine-related complication
Guiyun Li, Nanhai Chen, Zehua Feng, R Mark L Buller, John Osborne, Tiara Harms, Inger Damon, Chris Upton, and David J Esteban
Virol J. 2006; 3: 88. Published online 2006 October 25. doi: 10.1186/1743-422X-3-88.
PMCID: PMC1635044
Replication of a hepatitis C virus replicon clone in mouse cells
Susan L Uprichard, Josan Chung, Francis V Chisari, and Takaji Wakita
Virol J. 2006; 3: 89. Published online 2006 October 28. doi: 10.1186/1743-422X-3-89.
PMCID: PMC1635043
Porcine reproductive and respiratory syndrome virus (PRRSV) infection spreads by cell-to-cell transfer in cultured MARC-145 cells, is dependent on an intact cytoskeleton, and is suppressed by drug-targeting of cell permissiveness to virus infection
William A Cafruny, Richard G Duman, Grace HW Wong, Suleman Said, Pam Ward-Demo, Raymond RR Rowland, and Eric A Nelson
Virol J. 2006; 3: 90. Published online 2006 November 2. doi: 10.1186/1743-422X-3-90.
PMCID: PMC1635561
The changing epidemiology of dengue in Delhi, India
Ekta Gupta, Lalit Dar, Geetanjali Kapoor, and Shobha Broor
Virol J. 2006; 3: 92. Published online 2006 November 5. doi: 10.1186/1743-422X-3-92.
PMCID: PMC1636631
The role of myristoylation in the membrane association of the Lassa virus matrix protein Z
Thomas Strecker, Anna Maisa, Stephane Daffis, Robert Eichler, Oliver Lenz, and Wolfgang Garten
Virol J. 2006; 3: 93. Published online 2006 November 5. doi: 10.1186/1743-422X-3-93.
PMCID: PMC1647273
Serendipitous identification of natural Intergenotypic recombinants of hepatitis C in Ireland
Isabelle Moreau, Susan Hegarty, John Levis, Patrick Sheehy, Orla Crosbie, Elizabeth Kenny-Walsh, and Liam J Fanning
Virol J. 2006; 3: 95. Published online 2006 November 15. doi: 10.1186/1743-422X-3-95.
PMCID: PMC1654145
A self-inactivating retrovector incorporating the IL-2 promoter for activation-induced transgene expression in genetically engineered T-cells
Diana E Jaalouk, Laurence Lejeune, Clément Couture, and Jacques Galipeau
Virol J. 2006; 3: 97. Published online 2006 November 21. doi: 10.1186/1743-422X-3-97.
PMCID: PMC1679806
Distinct cellular responses differentiating alcohol- and hepatitis C virus-induced liver cirrhosis
Sharon L Lederer, Kathie-Anne Walters, Sean Proll, Bryan Paeper, Shahar Robinzon, Loreto Boix, Nelson Fausto, Jordi Bruix, and Michael G Katze
Virol J. 2006; 3: 98. Published online 2006 November 22. doi: 10.1186/1743-422X-3-98.
PMCID: PMC1676004
The role of crude human saliva and purified salivary MUC5B and MUC7 mucins in the inhibition of Human Immunodeficiency Virus type 1 in an inhibition assay
Habtom H Habte, Anwar S Mall, Corena de Beer, Zoë E Lotz, and Delawir Kahn
Virol J. 2006; 3: 99. Published online 2006 November 24. doi: 10.1186/1743-422X-3-99.
PMCID: PMC1676003
Small interfering RNA targeted to stem-loop II of the 5' untranslated region effectively inhibits expression of six HCV genotypes
Ramesh Prabhu, Robert F Garry, and Srikanta Dash
Virol J. 2006; 3: 100. Published online 2006 November 27. doi: 10.1186/1743-422X-3-100.
PMCID: PMC1698915
Molecular and phylogenetic analyses of a new Amphotropic murine leukemia virus (MuLV-1313)
Thomas M Howard, Zhijuan Sheng, Mingwu Wang, Yongchun Wu, and Suraiya Rasheed
Virol J. 2006; 3: 101. Published online 2006 December 5. doi: 10.1186/1743-422X-3-101.
PMCID: PMC1769482
Influenza A virus infection engenders a poor antibody response against the ectodomain of matrix protein 2
JingQi Feng, Manxin Zhang, Krystyna Mozdzanowska, Darya Zharikova, Henry Hoff, William Wunner, Robert B Couch, and Walter Gerhard
Virol J. 2006; 3: 102. Published online 2006 December 6. doi: 10.1186/1743-422X-3-102.
PMCID: PMC1702354
Comparative analysis of hepatitis C virus phylogenies from coding and non-coding regions: the 5' untranslated region (UTR) fails to classify subtypes
Peter T Hraber, William Fischer, William J Bruno, Thomas Leitner, and Carla Kuiken
Virol J. 2006; 3: 103. Published online 2006 December 14. doi: 10.1186/1743-422X-3-103.
PMCID: PMC1764733
The role of cholesterol and sphingolipids in chemokine receptor function and HIV-1 envelope glycoprotein-mediated fusion
Sherimay Ablan, Satinder S Rawat, Mathias Viard, Ji Ming Wang, Anu Puri, and Robert Blumenthal
Virol J. 2006; 3: 104. Published online 2006 December 22. doi: 10.1186/1743-422X-3-104.
PMCID: PMC1769366
Nectin-2-mediated entry of a syncytial strain of herpes simplex virus via pH-independent fusion with the plasma membrane of Chinese hamster ovary cells
Mark G Delboy, Jennifer L Patterson, Aimee M Hollander, and Anthony V Nicola
Virol J. 2006; 3: 105. Published online 2006 December 27. doi: 10.1186/1743-422X-3-105.
PMCID: PMC1779275
Human coronavirus 229E encodes a single ORF4 protein between the spike and the envelope genes
Ronald Dijkman, Maarten F Jebbink, Berry Wilbrink, Krzysztof Pyrc, Hans L Zaaijer, Philip D Minor, Sally Franklin, Ben Berkhout, Volker Thiel, and Lia van der Hoek
Virol J. 2006; 3: 106. Published online 2006 December 28. doi: 10.1186/1743-422X-3-106.
PMCID: PMC1774570
Reviews
Retrograde transport pathways utilised by viruses and protein toxins
Robert A Spooner, Daniel C Smith, Andrew J Easton, Lynne M Roberts, and J Michael Lord
Virol J. 2006; 3: 26. Published online 2006 April 7. doi: 10.1186/1743-422X-3-26.
PMCID: PMC1524934
Raman spectroscopy: the gateway into tomorrow's virology
Phelps J Lambert, Audy G Whitman, Ossie F Dyson, and Shaw M Akula
Virol J. 2006; 3: 51. Published online 2006 June 28. doi: 10.1186/1743-422X-3-51.
PMCID: PMC1526436
No vaccine against HIV yet-are we not perfectly equipped?
Mahender Singh
Virol J. 2006; 3: 60. Published online 2006 August 29. doi: 10.1186/1743-422X-3-60.
PMCID: PMC1563999
Short Reports
Comparison of real-time PCR and hemagglutination assay for quantitation of human polyomavirus JC
Moti L Chapagain, Taylor Nguyen, Thomas Bui, Saguna Verma, and Vivek R Nerurkar
Virol J. 2006; 3: 3. Published online 2006 January 9. doi: 10.1186/1743-422X-3-3.
PMCID: PMC1352366
RNAi dependent epigenetic marks on a geminivirus promoter
Afzal Muhammad Dogar
Virol J. 2006; 3: 5. Published online 2006 January 30. doi: 10.1186/1743-422X-3-5.
PMCID: PMC1402257
Mutational analysis of the potential catalytic residues of the VV G1L metalloproteinase
Kady M Honeychurch, Chelsea M Byrd, and Dennis E Hruby
Virol J. 2006; 3: 7. Published online 2006 February 27. doi: 10.1186/1743-422X-3-7.
PMCID: PMC1420270
Localization of deformed wing virus infection in queen and drone Apis mellifera L
Julie Fievet, Diana Tentcheva, Laurent Gauthier, Joachim de Miranda, François Cousserans, Marc Edouard Colin, and Max Bergoin
Virol J. 2006; 3: 16. Published online 2006 March 28. doi: 10.1186/1743-422X-3-16.
PMCID: PMC1475838
Human cytomegalovirus UL27 is not required for viral replication in human tissue implanted in SCID mice
Mark N Prichard, Debra C Quenelle, Deborah J Bidanset, Gloria Komazin, Sunwen Chou, John C Drach, and Earl R Kern
Virol J. 2006; 3: 18. Published online 2006 March 29. doi: 10.1186/1743-422X-3-18.
PMCID: PMC1448171
Testosterone correlates with Venezuelan equine encephalitis virus infection in macaques
Michael P Muehlenbein, Frank B Cogswell, Mark A James, James Koterski, and George V Ludwig
Virol J. 2006; 3: 19. Published online 2006 March 29. doi: 10.1186/1743-422X-3-19.
PMCID: PMC1450264
Role of CD8+ cells in controlling replication of nonpathogenic Simian Immunodeficiency Virus SIVmac1A11
Koen KA Van Rompay, Emily J Blackwood, Gary Landucci, Don Forthal, and Marta L Marthas
Virol J. 2006; 3: 22. Published online 2006 April 3. doi: 10.1186/1743-422X-3-22.
PMCID: PMC1500998
Nucleotide mismatches between the VP7 gene and the primer are associated with genotyping failure of a specific lineage from G1 rotavirus strains
Gabriel I Parra and Emilio E Espinola
Virol J. 2006; 3: 35. Published online 2006 May 25. doi: 10.1186/1743-422X-3-35.
PMCID: PMC1481633
In vitro inhibition of human influenza A virus replication by chloroquine
Eng Eong Ooi, Janet Seok Wei Chew, Jin Phang Loh, and Robert CS Chua
Virol J. 2006; 3: 39. Published online 2006 May 29. doi: 10.1186/1743-422X-3-39.
PMCID: PMC1481635
Sexually transmitted Human Papillomavirus type variations resulting in high grade cervical dysplasia in North-East North Dakota and North-West Minnesota
Lata Balakrishnan, Ryan Clauson, Timothy Weiland, Michelle Bianco, and Barry Milavetz
Virol J. 2006; 3: 46. Published online 2006 June 15. doi: 10.1186/1743-422X-3-46.
PMCID: PMC1550226
Deformed wing virus is not related to honey bees' aggressiveness
Agnès Rortais, Diana Tentcheva, Alexandros Papachristoforou, Laurent Gauthier, Gérard Arnold, Marc Edouard Colin, and Max Bergoin
Virol J. 2006; 3: 61. Published online 2006 August 30. doi: 10.1186/1743-422X-3-61.
PMCID: PMC1560114
Analysis of vaccinia virus temperature-sensitive I7L mutants reveals two potential functional domains
Megan J Moerdyk, Chelsea M Byrd, and Dennis E Hruby
Virol J. 2006; 3: 64. Published online 2006 August 31. doi: 10.1186/1743-422X-3-64.
PMCID: PMC1570340
Induction of neutralising antibodies by virus-like particles harbouring surface proteins from highly pathogenic H5N1 and H7N1 influenza viruses
Judit Szécsi, Bertrand Boson, Per Johnsson, Pia Dupeyrot-Lacas, Mikhail Matrosovich, Hans-Dieter Klenk, David Klatzmann, Viktor Volchkov, and François-Loïc Cosset
Virol J. 2006; 3: 70. Published online 2006 September 3. doi: 10.1186/1743-422X-3-70.
PMCID: PMC1569823
Detection of seroconversion to West Nile virus, Usutu virus and Sindbis virus in UK sentinel chickens
Alan Buckley, Alistair Dawson, and Ernest A Gould
Virol J. 2006; 3: 71. Published online 2006 September 4. doi: 10.1186/1743-422X-3-71.
PMCID: PMC1569371
Quantitative expression analysis of HHV-6 cell receptor CD46 on cells of human cord blood, peripheral blood and G-CSF mobilised leukapheresis cells
Stefanie Thulke, Aleksandar Radonić, Andreas Nitsche, and Wolfgang Siegert
Virol J. 2006; 3: 77. Published online 2006 September 19. doi: 10.1186/1743-422X-3-77.
PMCID: PMC1584223
Genomic presence of recombinant porcine endogenous retrovirus in transmitting miniature swine
Stanley I Martin, Robert Wilkinson, and Jay A Fishman
Virol J. 2006; 3: 91. Published online 2006 November 2. doi: 10.1186/1743-422X-3-91.
PMCID: PMC1635704
Rotavirus NSP4114-135 peptide has no direct, specific effect on chloride transport in rabbit brush-border membrane
Mathie Lorrot and Monique Vasseur
Virol J. 2006; 3: 94. Published online 2006 November 13. doi: 10.1186/1743-422X-3-94.
PMCID: PMC1657008
Study Protocol
SIV escape mutants in rhesus macaques vaccinated with NEF-derived lipopeptides and challenged with pathogenic SIVmac251
Pascale Villefroy, Franck Letourneur, Zoe Coutsinos, Lorenzo Mortara, Christian Beyer, Helene Gras-Masse, Jean-Gerard Guillet, and Isabelle Bourgault-Villada
Virol J. 2006; 3: 65. Published online 2006 August 31. doi: 10.1186/1743-422X-3-65.
PMCID: PMC1613241
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