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Volume 146(1);  January 2008
High Impact
Arabidopsis MicroRNAs
Aleel K. Grennan
Plant Physiol. 2008 January; 146(1): 3–4. doi: 10.1104/pp.104.900244.
PMCID: PMC2230572
On the Inside
On the Inside
Peter V. Minorsky
Plant Physiol. 2008 January; 146(1): 1–2. doi: 10.1104/pp.104.900245.
PMCID: PMC2230556
Bioinformatics
TEnest: Automated Chronological Annotation and Visualization of Nested Plant Transposable Elements
Brent A. Kronmiller and Roger P. Wise
Plant Physiol. 2008 January; 146(1): 45–59. doi: 10.1104/pp.107.110353.
PMCID: PMC2230558
Breakthrough Technologies
Development and Application of Novel Constructs to Score C:G-to-T:A Transitions and Homologous Recombination in Arabidopsis
Gert Van der Auwera, Joke Baute, Melanie Bauwens, Ingrid Peck, Denis Piette, Michael Pycke, Pieter Asselman, and Anna Depicker
Plant Physiol. 2008 January; 146(1): 22–31. doi: 10.1104/pp.107.105213.
PMCID: PMC2230553
Transcript Profiling by 3′-Untranslated Region Sequencing Resolves Expression of Gene Families
Andrea L. Eveland, Donald R. McCarty, and Karen E. Koch
Plant Physiol. 2008 January; 146(1): 32–44. doi: 10.1104/pp.107.108597.
PMCID: PMC2230554
Genome Analysis
Identification and Characterization of Nucleotide-Binding Site-Leucine-Rich Repeat Genes in the Model Plant Medicago truncatula
Carine Ameline-Torregrosa, Bing-Bing Wang, Majesta S. O'Bleness, Shweta Deshpande, Hongyan Zhu, Bruce Roe, Nevin D. Young, and Steven B. Cannon
Plant Physiol. 2008 January; 146(1): 5–21. doi: 10.1104/pp.107.104588.
PMCID: PMC2230567
Research Articles
Biochemical Processes and Macromolecular Structures
A Bifunctional Locus (BIO3-BIO1) Required for Biotin Biosynthesis in Arabidopsis
Rosanna Muralla, Elve Chen, Colleen Sweeney, Jennifer A. Gray, Allan Dickerman, Basil J. Nikolau, and David Meinke
Plant Physiol. 2008 January; 146(1): 60–73. doi: 10.1104/pp.107.107409.
PMCID: PMC2230573
Combined Metabolomic and Genetic Approaches Reveal a Link between the Polyamine Pathway and Albumin 2 in Developing Pea Seeds
Helene Vigeolas, Catherine Chinoy, Ellen Zuther, Bernard Blessington, Peter Geigenberger, and Claire Domoney
Plant Physiol. 2008 January; 146(1): 74–82. doi: 10.1104/pp.107.111369.
PMCID: PMC2230549
Functional Analyses of Cytosolic Glucose-6-Phosphate Dehydrogenases and Their Contribution to Seed Oil Accumulation in Arabidopsis
Setsuko Wakao, Carl Andre, and Christoph Benning
Plant Physiol. 2008 January; 146(1): 277–288. doi: 10.1104/pp.107.108423.
PMCID: PMC2230552
Heat Stability and Allosteric Properties of the Maize Endosperm ADP-Glucose Pyrophosphorylase Are Intimately Intertwined
Susan K. Boehlein, Janine R. Shaw, Jon D. Stewart, and L. Curtis Hannah
Plant Physiol. 2008 January; 146(1): 289–299. doi: 10.1104/pp.107.109942.
PMCID: PMC2230563
Bioenergetics and Photosynthesis
The Catalytic Properties of Hybrid Rubisco Comprising Tobacco Small and Sunflower Large Subunits Mirror the Kinetically Equivalent Source Rubiscos and Can Support Tobacco Growth
Robert Edward Sharwood, Susanne von Caemmerer, Pal Maliga, and Spencer Michael Whitney
Plant Physiol. 2008 January; 146(1): 83–96. doi: 10.1104/pp.107.109058.
PMCID: PMC2230571
Expression and Inhibition of the Carboxylating and Decarboxylating Enzymes in the Photosynthetic C4 Pathway of Marine Diatoms
Patrick J. McGinn and François M.M. Morel
Plant Physiol. 2008 January; 146(1): 300–309. doi: 10.1104/pp.107.110569.
PMCID: PMC2230575
Cell Biology and Signal Transduction
Trehalose-6-Phosphate Synthase/Phosphatase Regulates Cell Shape and Plant Architecture in Arabidopsis
S. Narasimha Chary, Glenn R. Hicks, Yoon Gi Choi, David Carter, and Natasha V. Raikhel
Plant Physiol. 2008 January; 146(1): 97–107. doi: 10.1104/pp.107.107441.
PMCID: PMC2230562
PHYTOCHROME KINASE SUBSTRATE1 Regulates Root Phototropism and Gravitropism
Hernán E. Boccalandro, Silvia N. De Simone, Ariane Bergmann-Honsberger, Isabelle Schepens, Christian Fankhauser, and Jorge J. Casal
Plant Physiol. 2008 January; 146(1): 108–115. doi: 10.1104/pp.107.106468.
PMCID: PMC2230574
ECA3, a Golgi-Localized P2A-Type ATPase, Plays a Crucial Role in Manganese Nutrition in Arabidopsis
Rebecca F. Mills, Melissa Louise Doherty, Rosa L. López-Marqués, Thilo Weimar, Paul Dupree, Michael G. Palmgren, Jon K. Pittman, and Lorraine E. Williams
Plant Physiol. 2008 January; 146(1): 116–128. doi: 10.1104/pp.107.110817.
PMCID: PMC2230566
Micro-Electrode Flux Estimation Confirms That the Solanum pimpinellifolium cu3 Mutant Still Responds to Systemin
Frank C. Lanfermeijer, Marten Staal, Robert Malinowski, Johannes W. Stratmann, and J. Theo M. Elzenga
Plant Physiol. 2008 January; 146(1): 129–139. doi: 10.1104/pp.107.110643.
PMCID: PMC2230550
Development and Hormone Action
Diarch Symmetry of the Vascular Bundle in Arabidopsis Root Encompasses the Pericycle and Is Reflected in Distich Lateral Root Initiation
Boris Parizot, Laurent Laplaze, Lilian Ricaud, Elodie Boucheron-Dubuisson, Vincent Bayle, Martin Bonke, Ive De Smet, Scott R. Poethig, Yka Helariutta, Jim Haseloff, Dominique Chriqui, Tom Beeckman, and Laurent Nussaume
Plant Physiol. 2008 January; 146(1): 140–148. doi: 10.1104/pp.107.107870.
PMCID: PMC2230548
The Arabidopsis Histone Deacetylases HDA6 and HDA19 Contribute to the Repression of Embryonic Properties after Germination
Motoki Tanaka, Akira Kikuchi, and Hiroshi Kamada
Plant Physiol. 2008 January; 146(1): 149–161. doi: 10.1104/pp.107.111674.
PMCID: PMC2230551
Environmental Stress and Adaptation to Stress
Involvement of Polyamine Oxidase in Wound Healing
Riccardo Angelini, Alessandra Tisi, Giuseppina Rea, Martha M. Chen, Maurizio Botta, Rodolfo Federico, and Alessandra Cona
Plant Physiol. 2008 January; 146(1): 162–177. doi: 10.1104/pp.107.108902.
PMCID: PMC2230557
Salt Modulates Gravity Signaling Pathway to Regulate Growth Direction of Primary Roots in Arabidopsis
Feifei Sun, Wensheng Zhang, Haizhou Hu, Bao Li, Youning Wang, Yankun Zhao, Kexue Li, Mengyu Liu, and Xia Li
Plant Physiol. 2008 January; 146(1): 178–188. doi: 10.1104/pp.107.109413.
PMCID: PMC2230569
Genetics, Genomics, and Molecular Evolution
A Versatile Transposon-Based Activation Tag Vector System for Functional Genomics in Cereals and Other Monocot Plants
Shaohong Qu, Aparna Desai, Rod Wing, and Venkatesan Sundaresan
Plant Physiol. 2008 January; 146(1): 189–199. doi: 10.1104/pp.107.111427.
PMCID: PMC2230568
Recurrent Deletions of Puroindoline Genes at the Grain Hardness Locus in Four Independent Lineages of Polyploid Wheat
Wanlong Li, Li Huang, and Bikram S. Gill
Plant Physiol. 2008 January; 146(1): 200–212. doi: 10.1104/pp.107.108852.
PMCID: PMC2230614
Plants Interacting with Other Organisms
Glufosinate Ammonium-Induced Pathogen Inhibition and Defense Responses Culminate in Disease Protection in bar-Transgenic Rice
Il-Pyung Ahn
Plant Physiol. 2008 January; 146(1): 213–227. doi: 10.1104/pp.107.105890.
PMCID: PMC2230565
Starch Serves as Carbohydrate Storage in Nematode-Induced Syncytia
Julia Hofmann, Dagmar Szakasits, Andreas Blöchl, Miroslaw Sobczak, Sabine Daxböck-Horvath, Wladyslaw Golinowski, Holger Bohlmann, and Florian M.W. Grundler
Plant Physiol. 2008 January; 146(1): 228–235. doi: 10.1104/pp.107.107367.
PMCID: PMC2230564
Powdery Mildew Induces Defense-Oriented Reprogramming of the Transcriptome in a Susceptible But Not in a Resistant Grapevine
Raymond W.M. Fung, Martin Gonzalo, Csaba Fekete, Laszlo G. Kovacs, Yan He, Ellen Marsh, Lauren M. McIntyre, Daniel P. Schachtman, and Wenping Qiu
Plant Physiol. 2008 January; 146(1): 236–249. doi: 10.1104/pp.107.108712.
PMCID: PMC2230561
Systems Biology, Molecular Biology, and Gene Regulation
A Genomic and Expression Compendium of the Expanded PEBP Gene Family from Maize
Olga N. Danilevskaya, Xin Meng, Zhenglin Hou, Evgueni V. Ananiev, and Carl R. Simmons
Plant Physiol. 2008 January; 146(1): 250–264. doi: 10.1104/pp.107.109538.
PMCID: PMC2230559
Discrete Developmental Roles for Temperate Cereal Grass VERNALIZATION1/FRUITFULL-Like Genes in Flowering Competency and the Transition to Flowering
Jill C. Preston and Elizabeth A. Kellogg
Plant Physiol. 2008 January; 146(1): 265–276. doi: 10.1104/pp.107.109561.
PMCID: PMC2230560
Physiological Roles of the β-Substituted Alanine Synthase Gene Family in Arabidopsis
Mutsumi Watanabe, Miyako Kusano, Akira Oikawa, Atsushi Fukushima, Masaaki Noji, and Kazuki Saito
Plant Physiol. 2008 January; 146(1): 310–320. doi: 10.1104/pp.107.106831.
PMCID: PMC2230570
Correction
CORRECTIONS
Plant Physiol. 2008 January; 146(1): 321. doi: 10.1104/pp.104.900243.
PMCID: PMC2230555
Corrects:Shinya Takahashi, et al. AtREV1, a Y-Family DNA Polymerase in Arabidopsis, Has Deoxynucleotidyl Transferase Activity in Vitro. Plant Physiol. 2007 November; 145(3): 1052–1060.
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