All the NCI tools presented on the CGAP web site are listed below, organized by biological function. The same tools are listed alphabetically on the left side bar.

Tools to Find Genes
	Clone Finder	Generates a list of the most relaible clones from a list of UniGene clusters.
	Gene Finder	Finds genes based on various search criteria and links to gene information from NCBI and NCI databases.
	Batch Gene Finder	Finds genes from a list of UniGene cluster numbers, GenBank accessions, or LocusLink identifiers, and links to gene information from NCBI and NCI databases.
	GO Browser	Classifies human and mouse genes by molecular function, biological process, and cellular component.
	Nucleotide BLAST	Finds genes based on nucleotide sequence similarities.

Tools to Find cDNA Libraries
	cDNA Library Finder	Finds EST libraries based on selected criteria. Library construction details are also provided.
	SAGE Absolute Level Lister	Lists all SAGE Genie libraries.

Tools to Examine Gene Expression
	cDNA Digital Gene Expression Displayer (DGED)	Distinguishes statistically significant differences in gene expression profiles between two pools of cDNA libraries.
	cDNA xProfiler	Compares gene expression between two pools of cDNA libraries.
	Gene Library Sorter (GLS)	Generates unique and non-unique gene lists for single cDNA library or library group.
	SAGE Absolute Level Lister	Shows the distribution of transcript expression levels in any particular SAGE library.
	SAGE Anatomic Viewer	Visually displays the relative expression of a given gene in normal and malignant tissues throughout the human body. .
	SAGE Digital Gene Expression Diplayer	Distinguishes significant differences in gene expression profiles between two pools of SAGE libraries.

Tools to Examine Chromosomes
	Expression-Based SNP Imagemaps	Find SNPs based on cancer type and chromosome.
	FISH-mapped BACs	Find BAC clones, available to the public, that integrate the cytogenetic and physical maps of the human genome.
	Genetic and Physical SNP Maps	Show genetic and physical locations of confirmed, validated, and predicted SNPs.
	Mitelman Database	CGAP has developed web-based tools to search the Mitelman Database (a genome-wide map of chromosomal breakpoints in human cancer).
	Recurrent Aberrations	CGAP has developed a tool to search the Mitelamn data of Recurrent Aberrations in cancer.
	SNP500Cancer	Finds SNPs that are of immediate importance to molecular epidemiology studies in cancer.

Tools to Find SNPs
	CGAP SNP Index	Searches for candidate SNPs by gene name, gene symbol, or GenBank accession number.
	Expression-Based SNP Imagemaps	Find SNPs based on cancer type and chromosome.
	Genetic and Physical SNP Maps	Show genetic and physical locations of confirmed, validated, and predicted SNPs.
	SNP Gene Viewer	View maps of SNPs on human reference sequences and MGC sequences, with predictions of protein coding changes.
	SNP500Cancer	Finds SNPs that are of immediate importance to molecular epidemiology studies in cancer.