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New Publications

2006-2008 Publications for RWU 4353

FISHERIES

U.S. Fish and Wildlife Service (USFWS). 2008. Bull Trout Recovery: Monitoring and Evaluation Guidance. Report prepared for the U.S. Fish and Wildlife Service by the Bull Trout Recovery and Monitoring Technical Group (RMEG). Portland, Oregon. Version 1 - 74 pp.

Peterson, D. P., Rieman, B. E., Dunham, J. B., Fausch, K. D., and M. K. Young. 2008. Analysis of trade-offs between the threat of invasion by nonnative brook trout (Salvelinus fontinalis) and intentional isolation for native westslope cutthroat trout (Oncorhynchus clarkii lewisi). Canadian Journal of Fisheries and Aquatic Sciences, 65(4):557–573 Appendix 1, Appendix 2

Tonina, D., Luce, C.H., Rieman, B., Buffington, J.M., Goodwin, P., Clayton, Stephen R., Ali, S.M., Barry, J.J., and Berenbrock, C. 2008. Hydrological response to timber harvest in northern Idaho: implications for channel scour and persistence of salmonids. Hydrological Processes, doi: 10.1002/hyp.6918.

Rieman, D.E., Isaak, D., Adams, S., Horan, D., Nagel, D., Luce, C., and D. Myers. 2007. Anticipated climate warming effects on bull trout habitats and populations across the Interior Columbia River Basin. Transactions of the American Fisheries Society. 136:1552-1565.

Peterson, D.P., Rieman, B.E., Dunham, J.B., Fausch, K.D., and Young, M.K. 2007 Analyzing tradeoffs between the threat of invasion by brook trout and effects of intentional isolation for native westslope cutthroat trout. Pages 51–57 In Carline, R.F.; LoSapio, C., eds. 2007. Sustaining wild trout in a changing world; proceedings of Wild Trout IX symposium; 2007 October 9-12; West Yellowstone, Montana. 308 pages.

Swenson, E. A., Rosenberger, A. E., and P. J. Howell. 2007. Validation of endoscopy for determination of maturity in small salmonids and sex of mature individuals. Transactions of the American Fisheries Society. 136:994–998.

Benjamin, J.R., J.B. Dunham, and M.R. Dare. 2007. Invasion by nonnative brook trout in Panther Creek, Idaho: roles of local habitat quality, biotic resistance, and connectivity to source habitats. Transactions of the American Fisheries Society 136: 875-888.

Benjamin, J.R. 2006. Invasion by nonnative brook trout in Panther Creek, Idaho: Roles of habitat quality, connectivity, and biotic resistance. M.S. Thesis, Boise State University, Idaho.

Courbois, J., S.L. Katz, D.J. Isaak, M. Rub, C. Jordan, A. Steel, R.F. Thurow, and T. Olsen. In Preparation. An evaluation of probability sampling strategies for estimating Chinook-salmon population size for redd count surveys. Canadian Journal of Fisheries and Aquatic Sciences.

Downs, C.C., D. Horan, E. Morgan-Harris, and R. Jakubowski. 2006. Spawning demographics and juvenile dispersal of an adfluvial bull trout population in Trestle Creek, Idaho. North American Journal of Fisheries Management 26:190-200.

Dunham, J.B. and M.M. Peacock. 2006. Landscape attributes and life history variability shape genetic structure of trout populations in a stream network. Landscape Ecology 21:901-916.

Fausch, C., B. Rieman, J. Dunham, and M. Young. 2006. Strategies for conserving native salmonid populations at risk from nonnative invasions: tradeoffs in using barriers to upstream movement. USDA Forest Service, Rocky Mountain Research Station, GTR-RMRS-174, Fort Collins, CO.

Isaak, D.J., R.F. Thurow, B.E. Rieman, and J.B. Dunham. 2007. Chinook salmon use of spawning patches: relative roles of habitat quality, size, and connectivity. Ecological Applications. 17(2):352-364.

Isaak, D.J. and R.F. Thurow. 2006. Network-scale and temporal variation in Chinook salmon redd distributions: patterns inferred from spatially continuous replicate surveys. Canadian Journal of Fisheries and Aquatic Sciences 63:285-296.

McGrath, C.C. and W.M. Lewis, Jr. 2007. Competition and predation as mechanisms for displacement of greenback cutthroat trout by brook trout. Transactions of the American Fisheries Society 136:1381-1392.

Monnot, Lauri, J.B. Dunham, T. Hoem, and P. Koetsier. 2008. Influences of body size and environmental factors on autumn downstream migration of bull trout in the Boise River, Idaho. North American Journal of Fisheries Management 28: 231-240. doi: 10: 1577/M06-095.1.

Neville, H., D.J. Isaak, R. Thurow, J. Dunham, and B. Rieman. 2007. Microsatellite variation reveals weak genetic structure and retention of genetic variability in threatened Chinook salmon (Oncorhynchus tshawytscha) within a Snake River watershed. Conservation Genetics 8(1):133-147.

Neville, H.M., J.B. Dunham, and M. Peacock. 2006. Assessing connectivity in salmonid fishes with DNA microsatellite markers, In K.R. Crooks and M. Sanjayan (eds.), Connectivity Conservation. Cambridge University Press, GB, p. 318-342.

Neville, H.M., D.J. Isaak, J.B. Dunham, R. F. Thurow, and B.E. Rieman. 2006. Fine-scale natal homing and localized movement as shaped by sex and spawning habitat in Chinook salmon: insights from spatial autocorrelation analysis of individual genotypes. Molecular Ecology, 15: 4589-4602. doi 10.1111/j.1365-294X.2006.03082.x

Reeves, G.H., P.A. Bisson, B.E. Rieman, L.E. Benda. 2006. Postfire Logging in Riparian Areas. Conservation Biology. 20(4):994-1004.

Rieman, B.E., J.D. Dunham, J. Clayton. 2006. Emerging concepts for management of river ecosystems and challenges to applied integration of physical and biological sciences in the Pacific Northwest. Journal of River Basin Management 4(2):85-97.

Rieman, B.E., J.T. Peterson, and D.E. Myers. 2006. Have brook trout (Salvelinus fontinalis) displaced bull trout (Salvelinus confluentus) along longitudinal gradients in central Idaho streams? Canadian Journal of Fish and Aquatic Sciences 63:63-78.

Thurow, R.F., B.E. Rieman, D.C. Lee, P.J. Howell, and R.D. Perkinson. 2007. Distribution and status of redband trout in the interior Columbia River Basin and portions of the Klamath River and Great Basins, In R.K. Schroeder and J.D. Hall (eds.), Redband Trout: Resilience and Challenge in a Changing Landscape. Oregon Chapter, American Fisheries Society, Corvallis, p. 28-46.

Thurow, R.F., J.T. Peterson, J.W. Guzevich. 2006. Utility and Validation of Night Snorkel Counts for Estimating Bull Trout Abundance in First-to-Third Order Streams. North American Journal of Fisheries Management 26:117-132

Whiteley, A., P. Spruell, B. Rieman and F. Allendorf. 2006. Fine-scale Genetic Structure of Bull Trout at the Southern Distribution Limit. Transactions of the American Fisheries Society 135:1238-1253.

WATERSHED

McKean, J.A., D.J. Isaak, and C.W. Wright. In Press. Geomorphic controls on salmon nesting patterns described by a new, narrow-beam terrestrial-aquatic lidar. Frontiers in Ecology and the Environment. 2008; 6, doi:10.1890/070109. (zip-file for download - 13,153 KB)

Barry, J.J., Buffington, J.M., Goodwin, P., King, J.G., and Emmett, W.W. 2008. Performance of bed-load transport equations relative to geomorphic significance: predicting effective discharge and its transport rate. Journal of Hydraulic Engineering 134(5): 601-615. doi 10.1061/(ASCE)0733-9429(2008)134:5(601).

Roper, B.B., Buffington, J.M., Archer, E., Moyer, C., and Ward, M. 2008. The role of observer variation in determining Rosgen stream types in northeastern Oregon mountain streams. Journal of the American Water Resources Association 44(2): 417-427. doi:10.1111/j.1752-1688.2008.00171.x.

Buffington, J. M., and Tonina, D. 2008. Discussion of "Evaluating vertical velocities between the stream and the hyporheic zone from temperature data" by Seydell, I., Wawra, B.E., and Zanke, U.C.E. In Gravel-Bed Rivers 6–From Process Understanding to River Restoration. Edited by Habersack, H., Piégay, H., and Rinaldi, M. Elsevier, pp. 128-131.

Tonina, D., and Bellin, A. 2008. Effects of pore-scale dispersion, degree of heterogeneity, sampling size, and source volume on the concentration moments of conservative solutes in heterogeneous formations. Advances in Water Resources 31:339-354. doi:10.1016/j.advwatres.2007.08.009.

Barry, J.J. 2007. Bed load transport in gravel-bed rivers, unpub. Ph.D. dissertation, University of Idaho, Boise, ID, 164 pp.

Barry, J.J., Buffington, J.M., King, J.G. 2007. Correction to "A general power equation for predicting bed load transport rates in gravel bed rivers". Water Resources Research 43:W08702. doi:10.1029/2007WR006103.

Bellin, A., and Tonina, D. 2007. Probability density function of non-reactive solute concentration in heterogeneous porous formations. Journal of Contaminant Hydrology 94:109-125. doi:10.1016/j.jconhyd.2007.05.005.

Benjamin, J. R., Dunham, J.B., and Dare, M. R. 2007. Invasion by non-native brook trout in Panther Creek, Idaho: roles of habitat quality, biotic resistance, and connectivity to source habitats. Transactions of the American Fisheries Society 136:875-888.

Bisson, Peter A., Dunham, J.B., Rosenberger, A. E., Luce, C. H., and Rieman, B. E. 2007. Influences of Wildfire and Channel Reorganization on Spatial and Temporal Variation in Stream Temperature and the Distribution of Fish and Amphibians. Ecosystems doi: 10.1007/s10021-007-9029-8.

Dunham, J.B. , Rosenberger, A. E., Luce, C. H. and Rieman, B. E. 2007. Influences of Wildfire and Channel Reorganization on Spatial and Temporal Variation in Stream Temperature and the Distribution of Fish and Amphibians. Ecosystems doi: 10.1007/s10021-007-9029-8.

Rieman, B.E., Isaak, D., Adams, S., Horan, D., Nagel, D., Luce, C., and Myers, D. 2007. Anticipated climate warming effects on bull trout habitats and populations across the Interior Columbia River Basin. Transactions of the American Fisheries Society 136:1552-1565.

Tonina, D., Buffington, J.M. 2007. Hyporheic exchange in gravel bed rivers with pool-riffle morphology: Laboratory experiments and three-dimensional modeling. Water Resources Research 43:W01421. doi:10.1029/2005WR004328.

Bisson, P.A., Montgomery, D.R., and Buffington, J.M. 2006. Valley segments, stream reaches, and channel units. In Methods in Stream Ecology. Edited by Hauer, F.R. and Lamberti, G.A. Academic Press/Elsevier, San Diego, CA. pp. 23-49. Book

Buffington, J.M.; Montgomery, D.R.; Greenberg, H.M. 2006. Erratum: Basin-scale availability of salmonid spawning gravel as influenced by channel type and hydraulic roughness in mountain catchments. Canadian Journal of Fisheries and Aquatic Sciences 63:2389. Erratum

Burke, M., Jorde, K., Buffington, J.M., Braatne, J. and Benjakar, R. 2006. Spatial distribution of impacts to channel bed mobility due to flow regulation, Kootenai River, USA. Proceedings of the 8th Federal Interagency Sedimentation Conference, Reno, NV, April 2-6, 2006.

Scheidt, N.E. 2006. Stream succession: Channel changes after wildfire disturbance. M.S. Thesis, University of Idaho, Boise. 60 pp.

USDA Forest Service - RMRS - Boise Aquatic Sciences Lab
Last Modified: Thursday, 10 July 2008 at 19:49:17 EDT