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Streptococcus mutans Search Results

Record: 1 of 1  
MiniMap IGR1115 IGR1113 IGR1112 IGR1114 IGR1111 tpn, - SMu1283 bglC, - SMu1285 SMu1282 SMu1280 SMu1281 SMu1287 frdC, - SMu1286 tpn, - SMu1283 bglC, - SMu1285 SMu1282 SMu1280 SMu1281 SMu1287 frdC, - SMu1286 tpn, - SMu1283 bglC, - SMu1285 SMu1282 SMu1280 SMu1281 tpn, - SMu1284 tpn, - SMu1284 SMu1287 frdC, - SMu1286


LANL Gene ID: SMu1282

GenBank Locus Tag: SMU.1406c

DNA Molecule Name:
1  

GenBank ID:
24379810

Gene Name:


Definition:
conserved hypothetical protein (possible oxidoreductase)

Cellular Location:
Cytoplasm [Evidence]

Gene Start:
1336226

Gene Stop:
1335360

Gene Length:
867

Molecular Weight*:
32263

pI*:
4.60

Net Charge*:
-13.11

EC:
 

Functional Class:
Unknown  

Gene Ontology:

Pathway: pathway table

Comment:


View in HOMD Genome Viewer

Blast Summary:  PSI-Blast Search
Matches in gapped BLAST to hypotheticals and to putative oxidoreductases. Residues 1-183 are 59% similar to 15903369|, a hypothetical from S.pneumoniae. Residues 1-188 are 45% similar to 15672349| from Lactococcus lactis.





The best hit to the Streptococcus agalactiae 2603 V/R genome is to SAG1083 (2e-59).


Top Blast Hits:  Updated monthly
Click here to view the entire PsiBlast results.
 gi|24379810|ref|NP_721765.1|  hypothetical protein SMU.1406c...   558   e-157
 gi|29375800|ref|NP_814954.1|  hypothetical protein EF1227 [E...   226   9e-58
 gi|148984816|ref|ZP_01818069.1|  pyridoxine biosynthesis pro...   226   1e-57
 gi|149019421|ref|ZP_01834783.1|  pyridoxine biosynthesis pro...   226   1e-57
 gi|149011704|ref|ZP_01832900.1|  pyridoxine biosynthesis pro...   226   1e-57
 gi|15901322|ref|NP_345926.1|  oxidoreductase, putative [Stre...   226   1e-57
 gi|15903369|ref|NP_358919.1|  hypothetical protein spr1326 [...   226   1e-57
 gi|22537241|ref|NP_688092.1|  hypothetical protein SAG1083 [...   226   2e-57
 gi|76786735|ref|YP_329789.1|  NADPH-dependent FMN reductase ...   226   2e-57
 gi|148992643|ref|ZP_01822311.1|  oxidoreductase, putative [S...   225   2e-57


InterPro Summary:  InterProScan

InterPro
IPR005025
Domain
NADPH-dependent FMN reductase
PF03358 [1-106]T 2.9000003626991004E-6 PF03358 FMN_red FMN_red
noIPR
unintegrated
unintegrated
G3DSA:3.40.50.360 [1-187]T 5.7999965385478E-48 G3DSA:3.40.50.360 G3DSA:3.40.50.360 G3DSA:3.40.50.360
SSF52218 [1-174]T 1.6000000000000002E-35 SSF52218 SSF52218 SSF52218


COGS Summary:  COGS Search
BeTs to 3 clades of COG0431
COG name: Predicted flavoprotein
Functional Class: R
The phylogenetic pattern of COG0431 is ----y--cebr---gp-----
Number of proteins in this genome belonging to this COG is 5
Blocks Summary:  Blocks Search
No significant hits to the Blocks database.

 ProDom Summary:  Protein Domain Search
Residues 2-131 are 51% similar to a (COMPLETE PROTEOME OXIDOREDUCTASE NADPH PHOSPHODIESTERASE) protein domain (PD009603 which is seen in Q9CIJ0_LACLA.


Paralogs:  Local Blast Search
SMu1282 is paralogously related (blast p-value < 1e-3) to SMu0998, SMu0161, SMu0997,SMu0112, all conserved hypotheticals except SMu0162, a predicted fumarate reductase.


Pfam Summary:  Pfam Search
Residues 1 to 163 (E-value = 1e-08) place SMu1282 in the FMN_red family which is described as NADPH-dependent FMN reductase (PF03358)

 Top PDB Hits:
No significant hits to the NCBI PDB database.

Gene Protein Sequence:
MKLVAIVGSNASFSYNRLLLQFIKERFGQAFALEILEIKELPLFNQDSSA
ADCPLIQKLNEDILNADGIIIATAEHNQTITASLKSMLEWLSYQLHPFKN
KPVMIVGASYYNQGTSHAQEHLRQILNAPGLDAWVMPGNEFFLGNASEVF
DENNQIKDDDTVIYLAQCLQRFIRYVTVVQELKGDSIQLSDAISGASESV
QEDSAASAMLEKRLSLQKKETNTPFERALDKTYGPALKDTLEDPFDKDLD
AQYKAIKKQPIPFEKALDNIFGKDLGIETTDPLDNLLR

Gene Nucleotide Sequence:  Sequence Viewer
ATGAAATTAGTTGCTATTGTTGGTTCTAATGCCTCCTTTTCCTATAATCG
TTTATTGTTGCAATTTATTAAAGAGCGGTTCGGTCAAGCTTTTGCATTGG
AGATTTTGGAAATTAAAGAGCTCCCTCTTTTCAATCAAGATAGTAGTGCT
GCAGATTGTCCTCTTATTCAAAAGCTTAATGAAGATATCTTAAATGCAGA
TGGCATCATTATTGCGACAGCAGAGCACAATCAAACCATTACAGCCAGTT
TAAAATCCATGCTTGAATGGTTATCTTACCAGCTTCATCCCTTTAAAAAT
AAACCTGTCATGATTGTCGGAGCTTCTTATTATAATCAGGGAACTTCTCA
TGCACAAGAGCACTTAAGGCAAATCCTAAATGCTCCCGGTCTTGATGCTT
GGGTCATGCCCGGAAATGAATTTTTTCTAGGGAATGCCTCAGAAGTCTTT
GATGAAAATAATCAAATAAAAGATGATGATACCGTTATTTATCTTGCGCA
ATGTTTACAACGTTTTATTCGCTATGTCACTGTTGTTCAGGAGTTAAAGG
GAGATTCCATTCAACTTAGTGATGCAATTTCAGGAGCATCAGAATCAGTC
CAAGAGGACTCTGCTGCATCTGCTATGCTAGAAAAGCGATTGTCACTACA
AAAGAAAGAGACCAATACTCCCTTTGAAAGAGCACTAGATAAAACTTATG
GACCGGCTTTGAAAGATACACTTGAAGATCCATTTGATAAGGATTTAGAT
GCCCAATACAAAGCAATCAAAAAACAACCAATACCTTTTGAAAAAGCCTT
AGACAATATCTTTGGAAAAGATTTAGGTATCGAAACAACCGATCCGCTGG
ATAATTTATTAAGATAA

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