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Volume 11(5);  May 2002
Articles
Effects of molecular crowding by saccharides on α-chymotrypsin dimerization
Chetan N. Patel, Schroeder M. Noble, Gresham T. Weatherly, Ashutosh Tripathy, Donald J. Winzor, and Gary J. Pielak
Protein Sci. 2002 May; 11(5): 997–1003.
PMCID: PMC2373554
Distance dependence and salt sensitivity of pairwise, coulombic interactions in a protein
Kelly K. Lee, Carolyn A. Fitch, and Bertrand García-Moreno E.
Protein Sci. 2002 May; 11(5): 1004–1016.
PMCID: PMC2373567
Direct comparison of binding equilibrium, thermodynamic, and rate constants determined by surface- and solution-based biophysical methods
Yasmina S.N. Day, Cheryl L. Baird, Rebecca L. Rich, and David G. Myszka
Protein Sci. 2002 May; 11(5): 1017–1025.
PMCID: PMC2373566
Timing and structural consideration for the processing of mitochondrial matrix space proteins by the mitochondrial processing peptidase (MPP)
Abhijit Mukhopadhyay, Philip Hammen, Mary Waltner-Law, and Henry Weiner
Protein Sci. 2002 May; 11(5): 1026–1035.
PMCID: PMC2373553
Exploring protein aggregation and self-propagation using lattice models: Phase diagram and kinetics
R.I. Dima and D. Thirumalai
Protein Sci. 2002 May; 11(5): 1036–1049.
PMCID: PMC2373569
Oligomerization of acidic fibroblast growth factor is not a prerequisite for its cell proliferation activity
Alphonse I. Arunkumar, Thallampuranam Krishnaswamy S. Kumar, Karuppanan Muthusamy Kathir, Sampath Srisailam, Han-Min Wang, Philominathan Sagaya Theresa Leena, Ya-Hui Chi, Ho-Chz Chen, Chieh-Hsi Wu, Rong-Tsun Wu, Gu-Gang Chang, Ing-Ming Chiu, and Chin Yu
Protein Sci. 2002 May; 11(5): 1050–1061.
PMCID: PMC2373565
The role of the conserved Lys68*:Glu265 intersubunit salt bridge in aspartate aminotransferase kinetics: Multiple forced covariant amino acid substitutions in natural variants
Edgar Deu, Keith A. Koch, and Jack F. Kirsch
Protein Sci. 2002 May; 11(5): 1062–1073.
PMCID: PMC2373551
Replacement of Asp-162 by Ala prevents the cooperative transition by the substrates while enhancing the effect of the allosteric activator ATP on E. coli aspartate transcarbamoylase
L. Fetler, P. Tauc, D.P. Baker, C.P. Macol, E.R. Kantrowitz, and P. Vachette
Protein Sci. 2002 May; 11(5): 1074–1081.
PMCID: PMC2373563
Assessment of the ability to model proteins with leucine-rich repeats in light of the latest structural information
Andrey V. Kajava and Bostjan Kobe
Protein Sci. 2002 May; 11(5): 1082–1090.
PMCID: PMC2373561
Thermodynamic analysis of the binding of component enzymes in the assembly of the pyruvate dehydrogenase multienzyme complex of Bacillus stearothermophilus
Hyo-Il Jung, Simon J. Bowden, Alan Cooper, and Richard N. Perham
Protein Sci. 2002 May; 11(5): 1091–1100.
PMCID: PMC2373555
Structural similarity to link sequence space: New potential superfamilies and implications for structural genomics
Patrick Aloy, Baldomero Oliva, Enrique Querol, Francesc X. Aviles, and Robert B. Russell
Protein Sci. 2002 May; 11(5): 1101–1116.
PMCID: PMC2373547
Characterization of Ad5 E3–14.7K, an adenoviral inhibitor of apoptosis: Structure, oligomeric state, and metal binding
Hee-Jung Kim and Mark P. Foster
Protein Sci. 2002 May; 11(5): 1117–1128.
PMCID: PMC2373546
Presence of the cofactor speeds up folding of Desulfovibrio desulfuricans flavodoxin
David Apiyo and Pernilla Wittung-Stafshede
Protein Sci. 2002 May; 11(5): 1129–1135.
PMCID: PMC2373544
Role of individual disulfide bonds in hen lysozyme early folding steps
Valérie Guez, Pascale Roux, Amiel Navon, and Michel E. Goldberg
Protein Sci. 2002 May; 11(5): 1136–1151.
PMCID: PMC2373558
Dynamics of green fluorescent protein mutant2 in solution, on spin-coated glasses, and encapsulated in wet silica gels
Giuseppe Chirico, Fabio Cannone, Sabrina Beretta, Alberto Diaspro, Barbara Campanini, Stefano Bettati, Roberta Ruotolo, and Andrea Mozzarelli
Protein Sci. 2002 May; 11(5): 1152–1161.
PMCID: PMC2373545
Novel α7-like nicotinic acetylcholine receptor subunits in the nematode Caenorhabditis elegans
Nigel P. Mongan, Andrew K. Jones, Graham R. Smith, Mark S.P. Sansom, and David B. Sattelle
Protein Sci. 2002 May; 11(5): 1162–1171.
PMCID: PMC2373549
Structural changes and molecular interactions of hydrophobin SC3 in solution and on a hydrophobic surface
X. Wang, M.L.De Vocht, J.De Jonge, B. Poolman, and G.T. Robillard
Protein Sci. 2002 May; 11(5): 1172–1181.
PMCID: PMC2373550
Structural similarity of the covalent complexes formed between the serpin plasminogen activator inhibitor-1 and the arginine-specific proteinases trypsin, LMW u-PA, HMW u-PA, and t-PA: Use of site-specific fluorescent probes of local environment
Marija Backovic, Efstratios Stratikos, Daniel A. Lawrence, and Peter G.W. Gettins
Protein Sci. 2002 May; 11(5): 1182–1191.
PMCID: PMC2373564
Stability and interactions of the amino-terminal domain of ClpB from Escherichia coli
Vekalet Tek and Michal Zolkiewski
Protein Sci. 2002 May; 11(5): 1192–1198.
PMCID: PMC1819561
Self-assembly of the hydrophobin SC3 proceeds via two structural intermediates
Marcel L. De Vocht, Ilya Reviakine, Wolf-Peter Ulrich, Wilma Bergsma-Schutter, Han A.B. Wösten, Horst Vogel, Alain Brisson, Joseph G.H. Wessels, and George T. Robillard
Protein Sci. 2002 May; 11(5): 1199–1205.
PMCID: PMC2373556
Functionally relevant motions of haloalkane dehalogenases occur in the specificity-modulating cap domains
Michal Otyepka and Jiří Damborský
Protein Sci. 2002 May; 11(5): 1206–1217.
PMCID: PMC2373552
Development of a cytokine analog with enhanced stability using computational ultrahigh throughput screening
Peizhi Luo, Robert J. Hayes, Cheryl Chan, Diane M. Stark, Marian Y. Hwang, Jonathan M. Jacinto, Padmaja Juvvadi, Helen S. Chung, Anirban Kundu, Marie L. Ary, and Bassil I. Dahiyat
Protein Sci. 2002 May; 11(5): 1218–1226.
PMCID: PMC2373568
Folding and stability of the b subunit of the F1F0 ATP synthase
Matthew Revington, Stanley D. Dunn, and Gary S. Shaw
Protein Sci. 2002 May; 11(5): 1227–1238.
PMCID: PMC2373557
Subunit organization in cytoplasmic dynein subcomplexes
Stephen J. King, Myriam Bonilla, Michael E. Rodgers, and Trina A. Schroer
Protein Sci. 2002 May; 11(5): 1239–1250.
PMCID: PMC2373548
Excision of a proposed electron transfer pathway in cytochrome c peroxidase and its replacement by a ligand-binding channel
Robin J. Rosenfeld, Anna-Maria A. Hays, Rabi A. Musah, and David B. Goodin
Protein Sci. 2002 May; 11(5): 1251–1259.
PMCID: PMC2373560
Salt-induced stabilization of apoflavodoxin at neutral pH is mediated through cation-specific effects
Susana Maldonado, María Pilar Irún, Luis Alberto Campos, José Antonio Rubio, Alejandra Luquita, Anabel Lostao, Renjie Wang, Bertrand García-Moreno E., and Javier Sancho
Protein Sci. 2002 May; 11(5): 1260–1273.
PMCID: PMC2373543
For the Record
A model of the replication fork blocking protein Fob1p based on the catalytic core domain of retroviral integrases
Mensur Dlakić
Protein Sci. 2002 May; 11(5): 1274–1277.
PMCID: PMC2373559
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