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Volume 12(7);  July 2003
Review
Crystal structures of fusion proteins with large-affinity tags
Douglas R. Smyth, Marek K. Mrozkiewicz, William J. McGrath, Pawel Listwan, and Bostjan Kobe
Protein Sci. 2003 July; 12(7): 1313–1322.
PMCID: PMC2323919
Articles
The role of side chain conformational flexibility in surface recognition by Tenebrio molitor antifreeze protein
Margaret E. Daley and Brian D. Sykes
Protein Sci. 2003 July; 12(7): 1323–1331.
PMCID: PMC2323928
Recombinant production and solution structure of PcTx1, the specific peptide inhibitor of ASIC1a proton-gated cation channels
Pierre Escoubas, Cédric Bernard, Gérard Lambeau, Michel Lazdunski, and Hervé Darbon
Protein Sci. 2003 July; 12(7): 1332–1343.
PMCID: PMC2323924
SiteLight: Binding-site prediction using phage display libraries
Inbal Halperin, Haim Wolfson, and Ruth Nussinov
Protein Sci. 2003 July; 12(7): 1344–1359.
PMCID: PMC2323941
Construction of a sequence motif characteristic of aminergic G protein–coupled receptors
Enoch S. Huang
Protein Sci. 2003 July; 12(7): 1360–1367.
PMCID: PMC2323918
Role of a solvent-exposed tryptophan in the recognition and binding of antibiotic substrates for a metallo-β-lactamase
James J.A. Huntley, Walter Fast, Stephen J. Benkovic, Peter E. Wright, and H. Jane Dyson
Protein Sci. 2003 July; 12(7): 1368–1375.
PMCID: PMC2323931
A solution NMR study of the binding kinetics and the internal dynamics of an HIV-1 protease-substrate complex
Etsuko Katoh, John M. Louis, Toshimasa Yamazaki, Angela M. Gronenborn, Dennis A. Torchia, and Rieko Ishima
Protein Sci. 2003 July; 12(7): 1376–1385.
PMCID: PMC2323926
Changes in structure and dynamics of the Fv fragment of a catalytic antibody upon binding of inhibitor
Gerard J.A. Kroon, Huaping Mo, Maria A. Martinez-Yamout, H. Jane Dyson, and Peter E. Wright
Protein Sci. 2003 July; 12(7): 1386–1394.
PMCID: PMC2323930
Unique stabilizing interactions identified in the two-stranded α-helical coiled-coil: Crystal structure of a cortexillin I/GCN4 hybrid coiled-coil peptide
Darin L. Lee, Sergei Ivaninskii, Peter Burkhard, and Robert S. Hodges
Protein Sci. 2003 July; 12(7): 1395–1405.
PMCID: PMC2323925
Analysis of accessible surface of residues in proteins
Laurence Lins, Annick Thomas, and Robert Brasseur
Protein Sci. 2003 July; 12(7): 1406–1417.
PMCID: PMC2323943
Three monophyletic superfamilies account for the majority of the known glycosyltransferases
Jing Liu and Arcady Mushegian
Protein Sci. 2003 July; 12(7): 1418–1431.
PMCID: PMC2323934
Crystal complexes of a predicted S-adenosylmethionine-dependent methyltransferase reveal a typical AdoMet binding domain and a substrate recognition domain
Darcie J. Miller, Nancy Ouellette, Elena Evdokimova, Alexei Savchenko, Aled Edwards, and Wayne F. Anderson
Protein Sci. 2003 July; 12(7): 1432–1442.
PMCID: PMC2323940
The inactivating factor of glutamine synthetase, IF7, is a "natively unfolded" protein
M. Isabel Muro-Pastor, Francisco N. Barrera, José C. Reyes, Francisco J. Florencio, and José L. Neira
Protein Sci. 2003 July; 12(7): 1443–1454.
PMCID: PMC2323932
Structure and properties of recombinant human pyridoxine 5′-phosphate oxidase
Faik N. Musayev, Martino L. Di Salvo, Tzu-Ping Ko, Verne Schirch, and Martin K. Safo
Protein Sci. 2003 July; 12(7): 1455–1463.
PMCID: PMC2323923
Crystal structure of a phosphatase with a unique substrate binding domain from Thermotoga maritima
Dong Hae Shin, Anne Roberts, Jaru Jancarik, Hisao Yokota, Rosalind Kim, David E. Wemmer, and Sung-Hou Kim
Protein Sci. 2003 July; 12(7): 1464–1472.
PMCID: PMC2323937
Folding specificity induced by loop stiffness
Laura Spagnolo, Salvador Ventura, and Luis Serrano
Protein Sci. 2003 July; 12(7): 1473–1482.
PMCID: PMC2323927
Solution structure and thermal stability of ribosomal protein L30e from hyperthermophilic archaeon Thermococcus celer
Kam-Bo Wong, Chi-Fung Lee, Siu-Hong Chan, Tak-Yuen Leung, Yu Wai Chen, and Mark Bycroft
Protein Sci. 2003 July; 12(7): 1483–1495.
PMCID: PMC2323938
Protein stability induced by ligand binding correlates with changes in protein flexibility
María Soledad Celej, Guillermo G. Montich, and Gerardo D. Fidelio
Protein Sci. 2003 July; 12(7): 1496–1506.
PMCID: PMC2323922
Interaction of the 18.5-kD isoform of myelin basic protein with Ca2+-calmodulin: Effects of deimination assessed by intrinsic Trp fluorescence spectroscopy, dynamic light scattering, and circular dichroism
David S. Libich, Christopher M.D. Hill, Ian R. Bates, F. Ross Hallett, Souzan Armstrong, Aleksander Siemiarczuk, and George Harauz
Protein Sci. 2003 July; 12(7): 1507–1521.
PMCID: PMC2323942
Measuring the stability of partly folded proteins using TMAO
Cecilia C. Mello and Doug Barrick
Protein Sci. 2003 July; 12(7): 1522–1529.
PMCID: PMC2323936
Effects of denaturants and substitutions of hydrophobic residues on backbone dynamics of denatured staphylococcal nuclease
Satoshi Ohnishi and David Shortle
Protein Sci. 2003 July; 12(7): 1530–1537.
PMCID: PMC2323921
Grafting a new metal ligand in the cocatalytic site of B. cereus metallo-β-lactamase: Structural flexibility without loss of activity
Rodolfo M. Rasia, Marcelo Ceolín, and Alejandro J. Vila
Protein Sci. 2003 July; 12(7): 1538–1546.
PMCID: PMC2323933
Predicting the topology of transmembrane helical proteins using mean burial propensity and a hidden-Markov-model-based method
Hongyi Zhou and Yaoqi Zhou
Protein Sci. 2003 July; 12(7): 1547–1555.
PMCID: PMC2323935
Protein Structure Report
Solution structure of Vibrio cholerae protein VC0424: A variation of the ferredoxin-like fold
Theresa A. Ramelot, Shuisong Ni, Sharon Goldsmith-Fischman, John R. Cort, Barry Honig, and Michael A. Kennedy
Protein Sci. 2003 July; 12(7): 1556–1561.
PMCID: PMC2323929
For the Record
Structural analysis of UBL5, a novel ubiquitin-like modifier
Teresa McNally, Qiulong Huang, Richard S. Janis, Zhihong Liu, Edward T. Olejniczak, and Regina M. Reilly
Protein Sci. 2003 July; 12(7): 1562–1566.
PMCID: PMC2323916
Recognition of cysteine-containing peptides through prompt fragmentation of the 4-dimethylaminophenylazophenyl-4′-maleimide derivative during analysis by MALDI-MS
Chad R. Borges and J. Throck Watson
Protein Sci. 2003 July; 12(7): 1567–1572.
PMCID: PMC2323917
Structural studies of the interaction of S-adenosylmethionine with the [4Fe-4S] clusters in biotin synthase and pyruvate formate-lyase activating enzyme
Michele M. Cosper, Nathaniel J. Cosper, Wei Hong, Jacob E. Shokes, William E. Broderick, Joan B. Broderick, Michael K. Johnson, and Robert A. Scott
Protein Sci. 2003 July; 12(7): 1573–1577.
PMCID: PMC2323939
Erratum
ERRATUM
Protein Sci. 2003 July; 12(7): 1578.
PMCID: PMC2323920
Corrects: Pier Luigi Martelli, et al. Prediction of the disulfide-bonding state of cysteines in proteins at 88% accuracy. Protein Sci. 2002 November; 11(11): 2735–2739.
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