| | This journal provides immediate access to some articles. Articles Effect of multiple symmetries on the association of R67 DHFR subunits bearing interfacial complementing mutations Julie Dam and Arnaud Blondel PMCID: PMC2286515 Using surface envelopes for discrimination of molecular models Jonathan M. Dugan and Russ B. Altman PMCID: PMC2286533 Variability-based sequence alignment identifies residues responsible for functional differences in α and β tubulin D. Kuchnir Fygenson, Daniel J. Needleman, and Kim Sneppen PMCID: PMC2286517 Effect of the N3 residue on the stability of the α-helix Teuku M. Iqbalsyah and Andrew J. Doig PMCID: PMC2286526 Thermodynamics and stability of a β-sheet complex: Molecular dynamics simulations on simplified off-lattice protein models Hyunbum Jang, Carol K. Hall, and Yaoqi Zhou PMCID: PMC2286508 Detection of homologous proteins by an intermediate sequence search Bino John and Andrej Sali PMCID: PMC2286512 Differences in aggregation properties of three site-specific mutants of recombinant human stefin B Manca Kenig, Selma Berbić, Aida Krije  torac, Louise Kroon-  itko, Magda Tu ek, Maru a Pompe-Novak, and Eva erovnik PMCID: PMC2286520 Protein flexibility and intrinsic disorder Predrag Radivojac, Zoran Obradovic, David K. Smith, Guang Zhu, Slobodan Vucetic, Celeste J. Brown, J. David Lawson, and A. Keith Dunker PMCID: PMC2286519 Tubulin equilibrium unfolding followed by time-resolved fluorescence and fluorescence correlation spectroscopy Susana A. Sánchez, Juan E. Brunet, David M. Jameson, Rosalba Lagos, and Octavio Monasterio PMCID: PMC2286518 Thermostability of multidomain proteins: Elongation factors EF-Tu from Escherichia coli and Bacillus stearothermophilus and their chimeric forms Hana Šanderová, Marta Hůlková, Petr Maloň, Markéta Kepková, and Jiří Jonák PMCID: PMC2286523 On the analysis of membrane protein circular dichroism spectra Narasimha Sreerama and Robert W. Woody PMCID: PMC2286510 Understanding the determinants of stability and folding of small globular proteins from their energetics Guido Tiana, Fabio Simona, Giacomo M.S. De Mori, Ricardo A. Broglia, and Giorgio Colombo PMCID: PMC2286534 Protein folding by the effects of macromolecular crowding Nobuhiko Tokuriki, Masataka Kinjo, Shigeru Negi, Masaru Hoshino, Yuji Goto, Itaru Urabe, and Tetsuya Yomo PMCID: PMC2286514 Expression and biochemical characterization of two small heat shock proteins from the thermoacidophilic crenarchaeon Sulfolobus tokodaii strain 7 Keisuke Usui, Noriyuki Ishii, Yutaka Kawarabayasi, and Masafumi Yohda PMCID: PMC2286530 N-linked glycosylation of dipeptidyl peptidase IV (CD26): Effects on enzyme activity, homodimer formation, and adenosine deaminase binding Kathleen Aertgeerts, Sheng Ye, Lihong Shi, Sridhar G. Prasad, Darbi Witmer, Ellen Chi, Bi-Ching Sang, Robert A. Wijnands, David R. Webb, and Ronald V. Swanson PMCID: PMC2286525 Intrasteric control of AMPK via the γ1 subunit AMP allosteric regulatory site Julian Adams, Zhi-Ping Chen, Bryce J.W. Van Denderen, Craig J. Morton, Michael W. Parker, Lee A. Witters, David Stapleton, and Bruce E. Kemp PMCID: PMC2286513 Two different proteins that compete for binding to thrombin have opposite kinetic and thermodynamic profiles Abel Baerga-Ortiz, Simon Bergqvist, Jeffrey G. Mandell, and Elizabeth A. Komives PMCID: PMC2286536 Helix formation and the unfolded state of a 52-residue helical protein Wei Cao, Clay Bracken, Neville R. Kallenbach, and Min Lu PMCID: PMC2286529 Are protein–protein interfaces more conserved in sequence than the rest of the protein surface? Daniel R. Caffrey, Shyamal Somaroo, Jason D. Hughes, Julian Mintseris, and Enoch S. Huang PMCID: PMC2286531 Packing, specificity, and mutability at the binding interface between the p160 coactivator and CREB-binding protein Stephen J. Demarest, Songpon Deechongkit, H. Jane Dyson, Ronald M. Evans, and Peter E. Wright PMCID: PMC2286511 Refinement of homology-based protein structures by molecular dynamics simulation techniques Hao Fan and Alan E. Mark PMCID: PMC2286528 PFIT and PFRIT: Bioinformatic algorithms for detecting glycosidase function from structure and sequence Gary Kleiger, Ekaterina M. Panina, Parag Mallick, and David Eisenberg PMCID: PMC2286537 The N-terminal domain (IF2N) of bacterial translation initiation factor IF2 is connected to the conserved C-terminal domains by a flexible linker Brian Søgaard Laursen, Anne Cecillie Kjærgaard, Kim Kusk Mortensen, David W. Hoffman, and Hans Uffe Sperling-Petersen PMCID: PMC2286522 Prediction of the odorant binding site of olfactory receptor proteins by human–mouse comparisons Orna Man, Yoav Gilad, and Doron Lancet PMCID: PMC2286516 Comparison of the 1.85 Å structure of CYP154A1 from Streptomyces coelicolor A3(2) with the closely related CYP154C1 and CYPs from antibiotic biosynthetic pathways Larissa M. Podust, Horacio Bach, Youngchang Kim, David C. Lamb, Miharu Arase, David H. Sherman, Steven L. Kelly, and Michael R. Waterman PMCID: PMC2286509 A new native EcHsp31 structure suggests a key role of structural flexibility for chaperone function Paulene M. Quigley, Konstantin Korotkov, François Baneyx, and Wim G.J. Hol PMCID: PMC2286521 FoldMiner: Structural motif discovery using an improved superposition algorithm Jessica Shapiro and Douglas Brutlag PMCID: PMC2286532 For the Record HNH family subclassification leads to identification of commonality in the His-Me endonuclease superfamily Preeti Mehta, Krishnamohan Katta, and Sankaran Krishnaswamy PMCID: PMC2286527 Active-site alkylation destabilizes human O6-alkylguanine DNA alkyltransferase Joseph J. Rasimas, Paula A. Dalessio, Ira J. Ropson, Anthony E. Pegg, and Michael G. Fried PMCID: PMC2286524 Correction Protein Sci. 2004 January; 13(1): 306. PMCID: PMC2286535 Corrects: Scott D. Sharrow, et al. Pheromone binding by polymorphic mouse major urinary proteins. Protein Sci. 2002 September; 11(9): 2247–2256. |
