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Volume 16(3);  March 2007
Accelerated Communication
Kinetic analysis of the binding of monomeric and dimeric ephrins to Eph receptors: Correlation to function in a growth cone collapse assay
Kumar B. Pabbisetty, Xin Yue, Chen Li, Juha-Pekka Himanen, Renping Zhou, Dimitar B. Nikolov, and Longqin Hu
Protein Sci. 2007 March; 16(3): 355–361. doi: 10.1110/ps.062608807.
PMCID: PMC2203307
Articles
Analysis of ligand binding to a ribose biosensor using site-directed mutagenesis and fluorescence spectroscopy
Natalie C. Vercillo, Kaitlin J. Herald, John M. Fox, Bryan S. Der, and Jonathan D. Dattelbaum
Protein Sci. 2007 March; 16(3): 362–368. doi: 10.1110/ps.062595707.
PMCID: PMC2203328
Effects of cyclization on conformational dynamics and binding properties of Lys48-linked di-ubiquitin
Bryan C. Dickinson, Ranjani Varadan, and David Fushman
Protein Sci. 2007 March; 16(3): 369–378. doi: 10.1110/ps.062508007.
PMCID: PMC2203315
Protein fabrication automation
J. Colin Cox, Janel Lape, Mahmood A. Sayed, and Homme W. Hellinga
Protein Sci. 2007 March; 16(3): 379–390. doi: 10.1110/ps.062591607.
PMCID: PMC2203321
Interactions of apomyoglobin with membranes: Mechanisms and effects on heme uptake
Grégory Vernier, Alexandre Chenal, Heidi Vitrac, Roya Barumandzadhe, Caroline Montagner, and Vincent Forge
Protein Sci. 2007 March; 16(3): 391–400. doi: 10.1110/ps.062531207.
PMCID: PMC2203327
Role of aspartate 400, arginine 262, and arginine 401 in the catalytic mechanism of human coproporphyrinogen oxidase
Jason R. Stephenson, Julie A. Stacey, Justin B. Morgenthaler, Jon A. Friesen, Timothy D. Lash, and Marjorie A. Jones
Protein Sci. 2007 March; 16(3): 401–410. doi: 10.1110/ps.062636907.
PMCID: PMC2203308
The pro-peptide of proNGF: Structure formation and intramolecular association with NGF
Marco Kliemannel, Ralph Golbik, Rainer Rudolph, Elisabeth Schwarz, and Hauke Lilie
Protein Sci. 2007 March; 16(3): 411–419. doi: 10.1110/ps.062376207.
PMCID: PMC2203323
Combining substrate dynamics, binding statistics, and energy barriers to rationalize regioselective hydroxylation of octane and lauric acid by CYP102A1 and mutants
K. Anton Feenstra, Eugene B. Starikov, Vlada B. Urlacher, Jan N.M. Commandeur, and Nico P.E. Vermeulen
Protein Sci. 2007 March; 16(3): 420–431. doi: 10.1110/ps.062224407.
PMCID: PMC2203314
The molecular architecture of glucose-1-phosphate uridylyltransferase
James B. Thoden and Hazel M. Holden
Protein Sci. 2007 March; 16(3): 432–440. doi: 10.1110/ps.062626007.
PMCID: PMC2203317
Important roles of hydroxylic amino acid residues in the function of Bacillus subtilis adenylosuccinate lyase
Mark L. Segall, Meghan A. Cashman, and Roberta F. Colman
Protein Sci. 2007 March; 16(3): 441–448. doi: 10.1110/ps.062650007.
PMCID: PMC2203318
A unified mechanism for protein folding: Predetermined pathways with optional errors
Mallela M.G. Krishna and S. Walter Englander
Protein Sci. 2007 March; 16(3): 449–464. doi: 10.1110/ps.062655907.
PMCID: PMC2203325
NMR structure of the pseudo-receiver domain of CikA
Tiyu Gao, Xiaofan Zhang, Natalia B. Ivleva, Susan S. Golden, and Andy LiWang
Protein Sci. 2007 March; 16(3): 465–475. doi: 10.1110/ps.062532007.
PMCID: PMC2203319
Design, expression, and stability of a diverse protein library based on the human fibronectin type III domain
C. Anders Olson and Richard W. Roberts
Protein Sci. 2007 March; 16(3): 476–484. doi: 10.1110/ps.062498407.
PMCID: PMC2203324
Domain motions of glucosamine-6P synthase: Comparison of the anisotropic displacements in the crystals and the catalytic hinge-bending rotation
Stéphane Mouilleron and Béatrice Golinelli-Pimpaneau
Protein Sci. 2007 March; 16(3): 485–493. doi: 10.1110/ps.062598107.
PMCID: PMC2203311
The dominant role of side-chain backbone interactions in structural realization of amino acid code. ChiRotor: A side-chain prediction algorithm based on side-chain backbone interactions
Velin Z. Spassov, Lisa Yan, and Paul K. Flook
Protein Sci. 2007 March; 16(3): 494–506. doi: 10.1110/ps.062447107.
PMCID: PMC2203320
Heme binding inhibits the fibrillization of amyloidogenic apomyoglobin and determines lack of aggregate cytotoxicity
Clara Iannuzzi, Silvia Vilasi, Marianna Portaccio, Gaetano Irace, and Ivana Sirangelo
Protein Sci. 2007 March; 16(3): 507–516. doi: 10.1110/ps.062471107.
PMCID: PMC2203322
Electrostatic changes in phosphorylase kinase induced by its obligatory allosteric activator Ca2+
Timothy S. Priddy, C. Russell Middaugh, and Gerald M. Carlson
Protein Sci. 2007 March; 16(3): 517–527. doi: 10.1110/ps.062577507.
PMCID: PMC2203309
Protein Structure Reports
The crystal structure of leucyl/phenylalanyl-tRNA-protein transferase from Escherichia coli
Xuesong Dong, Miyuki Kato-Murayama, Tomonari Muramatsu, Hirotada Mori, Mikako Shirouzu, Yoshitaka Bessho, and Shigeyuki Yokoyama
Protein Sci. 2007 March; 16(3): 528–534. doi: 10.1110/ps.062616107.
PMCID: PMC2203310
Crystal structure of AGR_C_4470p from Agrobacterium tumefaciens
Sergey M. Vorobiev, Helen Neely, Jayaraman Seetharaman, Li-Chung Ma, Rong Xiao, Thomas B. Acton, Gaetano T. Montelione, and Liang Tong
Protein Sci. 2007 March; 16(3): 535–538. doi: 10.1110/ps.062663307.
PMCID: PMC2203313
Solution structure of the coxsackievirus and adenovirus receptor domain 2
Shaokai Jiang and Michael Caffrey
Protein Sci. 2007 March; 16(3): 539–542. doi: 10.1110/ps.062643507.
PMCID: PMC2203326
The X-ray crystal structure of PA1607 from Pseudomonas aureginosa at 1.9 Å resolution—a putative transcription factor
Edyta A.L. Sieminska, Xiaohui Xu, Alexei Savchenko, and David A.R. Sanders
Protein Sci. 2007 March; 16(3): 543–549. doi: 10.1110/ps.062668207.
PMCID: PMC2203316
Award Address
Semisynthesis of unnatural amino acid mutants of paxillin: Protein probes for cell migration studies
Elizabeth M. Vogel and Barbara Imperiali
Protein Sci. 2007 March; 16(3): 550–556. doi: 10.1110/ps.062549407.
PMCID: PMC2203312
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