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Volume 2(11);  November 2006
Editorial
Ten Simple Rules for Selecting a Postdoctoral Position
Philip E Bourne and Iddo Friedberg
PLoS Comput Biol. 2006 November; 2(11): e121. Published online 2006 November 24. doi: 10.1371/journal.pcbi.0020121.
PMCID: PMC1664706
Research Articles
The Evolution of Two-Component Systems in Bacteria Reveals Different Strategies for Niche Adaptation
Eric Alm, Katherine Huang, and Adam Arkin
PLoS Comput Biol. 2006 November; 2(11): e143. Published online 2006 November 3. doi: 10.1371/journal.pcbi.0020143.
PMCID: PMC1630713
Identification of the Proliferation/Differentiation Switch in the Cellular Network of Multicellular Organisms
Kai Xia, Huiling Xue, Dong Dong, Shanshan Zhu, Jiamu Wang, Qingpeng Zhang, Lei Hou, Hua Chen, Ran Tao, Zheng Huang, Zheng Fu, Ye-Guang Chen, and Jing-Dong J Han
PLoS Comput Biol. 2006 November; 2(11): e145. Published online 2006 November 24. doi: 10.1371/journal.pcbi.0020145.
PMCID: PMC1664705
Funneled Landscape Leads to Robustness of Cell Networks: Yeast Cell Cycle
Jin Wang, Bo Huang, Xuefeng Xia, and Zhirong Sun
PLoS Comput Biol. 2006 November; 2(11): e147. Prepublished online 2006 September 25. Published online 2006 November 17. doi: 10.1371/journal.pcbi.0020147.
PMCID: PMC1636676
The Evolution of Word Composition in Metazoan Promoter Sequence
Eliot C Bush and Bruce T Lahn
PLoS Comput Biol. 2006 November; 2(11): e150. Prepublished online 2006 September 27. Published online 2006 November 3. doi: 10.1371/journal.pcbi.0020150.
PMCID: PMC1630712
A Curvature-Mediated Mechanism for Localization of Lipids to Bacterial Poles
Kerwyn Casey Huang, Ranjan Mukhopadhyay, and Ned S Wingreen
PLoS Comput Biol. 2006 November; 2(11): e151. Prepublished online 2006 October 4. Published online 2006 November 10. doi: 10.1371/journal.pcbi.0020151.
PMCID: PMC1635540
Humans Can Adopt Optimal Discounting Strategy under Real-Time Constraints
N Schweighofer, K Shishida, C. E Han, Y Okamoto, S. C Tanaka, S Yamawaki, and K Doya
PLoS Comput Biol. 2006 November; 2(11): e152. Prepublished online 2006 October 4. Published online 2006 November 10. doi: 10.1371/journal.pcbi.0020152.
PMCID: PMC1635539
Structural Modeling of Protein Interactions by Analogy: Application to PSD-95
Dmitry Korkin, Fred P Davis, Frank Alber, Tinh Luong, Min-Yi Shen, Vladan Lucic, Mary B Kennedy, and Andrej Sali
PLoS Comput Biol. 2006 November; 2(11): e153. Prepublished online 2006 October 5. Published online 2006 November 10. doi: 10.1371/journal.pcbi.0020153.
PMCID: PMC1635541
Optimal Noise Filtering in the Chemotactic Response of Escherichia coli
Burton W Andrews, Tau-Mu Yi, and Pablo A Iglesias
PLoS Comput Biol. 2006 November; 2(11): e154. Prepublished online 2006 October 5. Published online 2006 November 17. doi: 10.1371/journal.pcbi.0020154.
PMCID: PMC1636674
3D Complex: A Structural Classification of Protein Complexes
Emmanuel D Levy, Jose B Pereira-Leal, Cyrus Chothia, and Sarah A Teichmann
PLoS Comput Biol. 2006 November; 2(11): e155. Prepublished online 2006 October 5. Published online 2006 November 17. doi: 10.1371/journal.pcbi.0020155.
PMCID: PMC1636673
Selection of Target Sites for Mobile DNA Integration in the Human Genome
Charles Berry, Sridhar Hannenhalli, Jeremy Leipzig, and Frederic D Bushman
PLoS Comput Biol. 2006 November; 2(11): e157. Published online 2006 November 24. doi: 10.1371/journal.pcbi.0020157.
PMCID: PMC1664696
Meta-Analysis of Differentiating Mouse Embryonic Stem Cell Gene Expression Kinetics Reveals Early Change of a Small Gene Set
Clive H Glover, Michael Marin, Connie J Eaves, Cheryl D Helgason, James M Piret, and Jennifer Bryan
PLoS Comput Biol. 2006 November; 2(11): e158. Published online 2006 November 24. doi: 10.1371/journal.pcbi.0020158.
PMCID: PMC1664699
An Integrative Genomic Approach to Uncover Molecular Mechanisms of Prokaryotic Traits
Yang Liu, Jianrong Li, Lee Sam, Chern-Sing Goh, Mark Gerstein, and Yves A Lussier
PLoS Comput Biol. 2006 November; 2(11): e159. Prepublished online 2006 October 10. Published online 2006 November 17. doi: 10.1371/journal.pcbi.0020159.
PMCID: PMC1636675
Robustness and Fragility in Immunosenescence
Sean P Stromberg and Jean Carlson
PLoS Comput Biol. 2006 November; 2(11): e160. Prepublished online 2006 October 10. Published online 2006 November 24. doi: 10.1371/journal.pcbi.0020160.
PMCID: PMC1664698
Computational Inference of Neural Information Flow Networks
V. Anne Smith, Jing Yu, Tom V Smulders, Alexander J Hartemink, and Erich D Jarvis
PLoS Comput Biol. 2006 November; 2(11): e161. Prepublished online 2006 October 12. Published online 2006 November 24. doi: 10.1371/journal.pcbi.0020161.
PMCID: PMC1664702
Geometrically Repatterned Immunological Synapses Uncover Formation Mechanisms
Marc Thilo Figge and Michael Meyer-Hermann
PLoS Comput Biol. 2006 November; 2(11): e171. Published online 2006 November 10. doi: 10.1371/journal.pcbi.0020171.
PMCID: PMC1635538
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