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Volume 2(3);  March 2006
Correspondence
Understanding the Degradation of Hominid Gene Control
Peter D Keightley, Martin J Lercher, and Adam Eyre-Walker
PLoS Comput Biol. 2006 March; 2(3): e19. Published online 2006 March 31. doi: 10.1371/journal.pcbi.0020019.
PMCID: PMC1420656
Authors' Reply
Eliot C Bush and Bruce T Lahn
PLoS Comput Biol. 2006 March; 2(3): e26. Published online 2006 March 31. doi: 10.1371/journal.pcbi.0020026.
PMCID: PMC1420661
Research Articles
Large-Scale Trends in the Evolution of Gene Structures within 11 Animal Genomes
Mark Yandell, Chris J Mungall, Chris Smith, Simon Prochnik, Joshua Kaminker, George Hartzell, Suzanna Lewis, and Gerald M Rubin
PLoS Comput Biol. 2006 March; 2(3): e15. Published online 2006 March 3. doi: 10.1371/journal.pcbi.0020015.
PMCID: PMC1386723
Circadian Clocks Are Resounding in Peripheral Tissues
Andrey A Ptitsyn, Sanjin Zvonic, Steven A Conrad, L. Keith Scott, Randall L Mynatt, and Jeffrey M Gimble
PLoS Comput Biol. 2006 March; 2(3): e16. Published online 2006 March 10. doi: 10.1371/journal.pcbi.0020016.
PMCID: PMC1391918
A Third Approach to Gene Prediction Suggests Thousands of Additional Human Transcribed Regions
Gustavo Glusman, Shizhen Qin, M. Raafat El-Gewely, Andrew F Siegel, Jared C Roach, Leroy Hood, and Arian F. A Smit
PLoS Comput Biol. 2006 March; 2(3): e18. Prepublished online 2006 January 26. Published online 2006 March 17. doi: 10.1371/journal.pcbi.0020018.
PMCID: PMC1391917
Spatiotemporal Expression Control Correlates with Intragenic Scaffold Matrix Attachment Regions (S/MARs) in Arabidopsis thaliana
Igor V Tetko, Georg Haberer, Stephen Rudd, Blake Meyers, Hans-Werner Mewes, and Klaus F. X Mayer
PLoS Comput Biol. 2006 March; 2(3): e21. Published online 2006 March 31. doi: 10.1371/journal.pcbi.0020021.
PMCID: PMC1420657
Role of Mechanical Factors in the Morphology of the Primate Cerebral Cortex
Claus C Hilgetag and Helen Barbas
PLoS Comput Biol. 2006 March; 2(3): e22. Prepublished online 2006 February 9. Published online 2006 March 24. doi: 10.1371/journal.pcbi.0020022.
PMCID: PMC1409812
The Emergence of Up and Down States in Cortical Networks
David Holcman and Misha Tsodyks
PLoS Comput Biol. 2006 March; 2(3): e23. Prepublished online 2006 February 10. Published online 2006 March 24. doi: 10.1371/journal.pcbi.0020023.
PMCID: PMC1409813
Estimating Costs and Benefits of CTL Escape Mutations in SIV/HIV Infection
Vitaly V Ganusov and Rob J De Boer
PLoS Comput Biol. 2006 March; 2(3): e24. Prepublished online 2006 February 13. Published online 2006 March 31. doi: 10.1371/journal.pcbi.0020024.
PMCID: PMC1420660
Dynamical Principles of Two-Component Genetic Oscillators
Raúl Guantes and Juan F Poyatos
PLoS Comput Biol. 2006 March; 2(3): e30. Prepublished online 2006 February 22. Published online 2006 March 31. doi: 10.1371/journal.pcbi.0020030.
PMCID: PMC1420664
Corrections
Correction: New Maximum Likelihood Estimators for Eukaryotic Intron Evolution
Hung D Nguyen, Maki Yoshihama, and Naoya Kenmochi
PLoS Comput Biol. 2006 March; 2(3): e28. Published online 2005 December 30. doi: 10.1371/journal.pcbi.0020028.
PMCID: PMC1420662
Corrects: Hung D Nguyen, et al. New Maximum Likelihood Estimators for Eukaryotic Intron Evolution. PLoS Comput Biol. 2005 December; 1(7): e79.
Correction: Structure Modeling of All Identified G Protein–Coupled Receptors in the Human Genome
Yang Zhang, Mark E DeVries, and Jeffrey Skolnick
PLoS Comput Biol. 2006 March; 2(3): e29. Published online 2006 February 17. doi: 10.1371/journal.pcbi.0020029.
PMCID: PMC1420663
Corrects: Yang Zhang, et al. Structure Modeling of All Identified G Protein–Coupled Receptors in the Human Genome. PLoS Comput Biol. 2006 February; 2(2): e13.
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