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Volume 1(4);  September 2005
Review
The Human Connectome: A Structural Description of the Human Brain
Olaf Sporns, Giulio Tononi, and Rolf Kötter
PLoS Comput Biol. 2005 September; 1(4): e42. Published online 2005 September 30. doi: 10.1371/journal.pcbi.0010042.
PMCID: PMC1239902
Research Articles
A Biophysical Model of the Mitochondrial Respiratory System and Oxidative Phosphorylation
Daniel A Beard
PLoS Comput Biol. 2005 September; 1(4): e36. Published online 2005 September 9. doi: 10.1371/journal.pcbi.0010036.
PMCID: PMC1201326
Transition to Quorum Sensing in an Agrobacterium Population: A Stochastic Model
Andrew B Goryachev, Da-Jun Toh, Keng Boon Wee, Travis Lee, Hai-Bao Zhang, and Lian-Hui Zhang
PLoS Comput Biol. 2005 September; 1(4): e37. Published online 2005 September 16. doi: 10.1371/journal.pcbi.0010037.
PMCID: PMC1214540
Analysis of a Splice Array Experiment Elucidates Roles of Chromatin Elongation Factor Spt4–5 in Splicing
Yuanyuan Xiao, Yee H Yang, Todd A Burckin, Lily Shiue, Grant A Hartzog, and Mark R Segal
PLoS Comput Biol. 2005 September; 1(4): e39. Published online 2005 September 16. doi: 10.1371/journal.pcbi.0010039.
PMCID: PMC1214541
Inferring Hypotheses on Functional Relationships of Genes: Analysis of the Arabidopsis thaliana Subtilase Gene Family
Carsten Rautengarten, Dirk Steinhauser, Dirk Büssis, Annick Stintzi, Andreas Schaller, Joachim Kopka, and Thomas Altmann
PLoS Comput Biol. 2005 September; 1(4): e40. Published online 2005 September 23. doi: 10.1371/journal.pcbi.0010040.
PMCID: PMC1236819
A Digital Atlas to Characterize the Mouse Brain Transcriptome
James P Carson, Tao Ju, Hui-Chen Lu, Christina Thaller, Mei Xu, Sarah L Pallas, Michael C Crair, Joe Warren, Wah Chiu, and Gregor Eichele
PLoS Comput Biol. 2005 September; 1(4): e41. Published online 2005 September 23. doi: 10.1371/journal.pcbi.0010041.
PMCID: PMC1215388
ReAS: Recovery of Ancestral Sequences for Transposable Elements from the Unassembled Reads of a Whole Genome Shotgun
Ruiqiang Li, Jia Ye, Songgang Li, Jing Wang, Yujun Han, Chen Ye, Jian Wang, Huanming Yang, Jun Yu, Gane Ka-Shu Wong, and Jun Wang
PLoS Comput Biol. 2005 September; 1(4): e43. Published online 2005 September 23. doi: 10.1371/journal.pcbi.0010043.
PMCID: PMC1232128
Modeling the Amplification Dynamics of Human Alu Retrotransposons
Dale J Hedges, Richard Cordaux, Jinchuan Xing, David J Witherspoon, Alan R Rogers, Lynn B Jorde, and Mark A Batzer
PLoS Comput Biol. 2005 September; 1(4): e44. Published online 2005 September 30. doi: 10.1371/journal.pcbi.0010044.
PMCID: PMC1239904
Entropic Stabilization of Proteins and Its Proteomic Consequences
Igor N Berezovsky, William W Chen, Paul J Choi, and Eugene I Shakhnovich
PLoS Comput Biol. 2005 September; 1(4): e47. Prepublished online 2005 September 1. Published online 2005 September 30. doi: 10.1371/journal.pcbi.0010047.
PMCID: PMC1239905
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