Drug Trafficking Routes and Hepatitis B in Injection Drug Users, Manipur, India
Sibnarayan Datta,* Arup Banerjee,* Partha K. Chandra,* Pradip K. Mahapatra,†
Shekhar Chakrabarti,‡ and Runu Chakravarty*
*ICMR Virus Unit, Kolkata, India;
†Jadavpur University, Kolkata, India; and ‡National Institute of Cholera and
Enteric Diseases, Kolkata, India
Vol. 12, No. 12 • December 2006
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| Appendix Table. Nucleotide variability in the partial s gene, including the region encoding the major hydrophillic loop, compared with consensus sequences* | |||||||||||||||||||||||||||||||||||
| Isolate | 367 |
400 |
414 |
436 |
451 |
454 |
457 |
482 |
484 |
491 |
493 |
494 |
499 |
505 |
511 |
514 |
519 |
520 |
529 |
531 |
544 |
546 |
555 |
562 |
574 |
581 |
586 |
587 |
592 |
598 |
616 |
619 |
629 |
630 |
633 |
| Cn A1 | T |
A |
T |
A |
T |
T |
A |
A |
T |
T |
C |
A |
A |
C |
A |
C |
A |
A |
G |
C |
C |
A |
T |
A |
A |
A |
T |
G |
T |
C |
A |
T |
G |
C |
A |
| Cn A2 | – |
– |
– |
G |
– |
– |
– |
– |
– |
– |
A |
– |
– |
T |
– |
A |
– |
– |
– |
– |
– |
– |
– |
– |
– |
– |
– |
– |
– |
– |
G |
C |
– |
– |
– |
| Cn D | – |
C |
– |
G |
C |
– |
– |
– |
– |
– |
T |
T |
C |
– |
– |
A |
G |
– |
– |
– |
A |
C |
A |
C |
C |
T |
C |
– |
– |
– |
– |
C |
– |
G |
– |
| Cn C1 | C |
C |
– |
G |
C |
C |
– |
C |
– |
A |
A |
T |
T |
– |
– |
A |
– |
G |
– |
T |
A |
C |
– |
T |
– |
T |
C |
– |
C |
T |
– |
C |
– |
– |
– |
| Cn C2 | – |
C |
– |
G |
C |
C |
– |
C |
– |
A |
A |
T |
T |
– |
– |
A |
– |
G |
– |
T |
A |
C |
– |
T |
– |
T |
C |
– |
– |
T |
– |
– |
– |
– |
G |
| IDU1 | – |
– |
– |
– |
– |
– |
– |
– |
– |
– |
A |
– |
– |
T |
– |
A |
– |
– |
– |
– |
– |
– |
– |
– |
– |
T |
– |
– |
– |
– |
– |
C |
– |
G |
– |
| IDU2 | – |
– |
– |
– |
– |
– |
G |
– |
– |
– |
A |
– |
– |
– |
– |
– |
– |
– |
– |
– |
– |
– |
– |
– |
– |
– |
– |
– |
– |
– |
– |
– |
– |
– |
– |
| IDU3 | – |
– |
– |
G |
C |
C |
– |
– |
– |
– |
A |
– |
– |
– |
– |
– |
– |
– |
– |
– |
– |
C |
– |
– |
– |
T |
C |
– |
– |
T |
– |
– |
– |
– |
– |
| IDU4 | – |
– |
– |
G |
C |
C |
– |
C |
– |
– |
A |
T |
C |
– |
– |
A |
– |
G |
– |
T |
A |
C |
– |
T |
– |
T |
C |
– |
C |
T |
– |
– |
– |
– |
G |
| IDU5 | C |
– |
– |
G |
C |
C |
– |
C |
C |
A |
A |
T |
– |
– |
– |
A |
– |
G |
– |
T |
A |
– |
– |
C |
– |
T |
C |
– |
C |
T |
– |
C |
– |
– |
– |
| IDU6 | C |
– |
C |
G |
C |
C |
G |
C |
– |
A |
A |
T |
C |
– |
– |
A |
– |
G |
– |
T |
A |
C |
– |
T |
– |
T |
C |
A |
C |
T |
– |
C |
– |
– |
G |
| IDU7 | C |
– |
C |
G |
C |
C |
G |
C |
– |
A |
A |
T |
C |
– |
G |
A |
– |
G |
– |
T |
A |
C |
– |
T |
– |
T |
C |
A |
C |
T |
– |
C |
A |
– |
G |
| IDU8 | – |
C |
– |
G |
C |
C |
– |
C |
– |
A |
A |
T |
– |
– |
– |
A |
– |
G |
– |
T |
A |
C |
– |
T |
– |
T |
C |
– |
– |
T |
– |
– |
– |
– |
G |
| IDU9 | – |
C |
– |
G |
C |
C |
– |
C |
– |
A |
A |
T |
T |
– |
– |
A |
– |
G |
A |
T |
A |
C |
– |
T |
– |
T |
C |
– |
– |
T |
– |
– |
– |
– |
G |
| IDU10 | – |
C |
– |
G |
C |
C |
– |
C |
– |
A |
A |
T |
T |
– |
– |
– |
– |
G |
– |
T |
– |
C |
– |
T |
– |
T |
C |
– |
– |
T |
– |
– |
– |
– |
G |
| *Indicated by Cn, followed by genotype/subgenotype. IDU, injection drug user. | |||||||||||||||||||||||||||||||||||
Download PDF [ 57
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This page posted November 8, 2006
This page last reviewed September 2, 2008
