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Software Applications

NERSC installs, maintains, and supports a number of third-party software applications. Most can be used free-of-charge by all NERSC users.

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Bioinfomatics

PackagePlatformVersionModule Docs
blast bassi 2.2.6 blast  Vendor
blast jacquard 2.2.6 blast NERSC; Vendor
(*) Denotes limited support
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Chemistry

PackagePlatformVersionModule Docs
amber bassi pre 9.0 amber NERSC; Vendor
amber franklin 9.0 amber NERSC; Vendor
amber jacquard 8.0 amber/8.0 NERSC; Vendor
amber jacquard 9.0 amber NERSC; Vendor
amber jacquard pre 9.0 amber NERSC; Vendor
gamess bassi 2004.11* gamess NERSC; Vendor
gamess bassi 2007.03* gamess/2007.03 NERSC; Vendor
gamess jacquard 2004.11* gamess NERSC; Vendor
gamess jacquard 2007.03* gamess/2007.03 NERSC; Vendor
gaussian03 bassi c2 g03/c2 NERSC; Vendor
gaussian03 bassi d2 g03/d2 NERSC; Vendor
gaussian03 bassi e1 g03/e1 NERSC; Vendor
gaussian03 jacquard c2 g03 NERSC; Vendor
gaussian03 jacquard d2 g03/d2 NERSC; Vendor
gromacs jacquard 3.3 gromacs NERSC; Vendor
molpro bassi 2002.6* molpro NERSC; Vendor
molpro bassi 2006.1* molpro/2006.1 NERSC; Vendor
molpro jacquard 2002.6* molpro NERSC; Vendor
molpro jacquard 2006.1* molpro/2006.1_serial NERSC; Vendor
molpro jacquard 2006.1* molpro/2006.1 NERSC; Vendor
namd bassi 2.6b1 namd NERSC; Vendor
namd davinci 2.6b1 namd NERSC; Vendor
namd franklin 2.6 namd NERSC; Vendor
namd jacquard 2.5 namd/2.5 NERSC; Vendor
namd jacquard 2.6 namd/2.6 NERSC; Vendor
namd jacquard 2.6b1 namd/2.6b1 NERSC; Vendor
nwchem bassi 4.7 nwchem/4.7 NERSC; Vendor
nwchem bassi 5.0 nwchem NERSC; Vendor
nwchem franklin 5.1 nwchem NERSC; Vendor
nwchem jacquard 4.7 nwchem/4.7 NERSC; Vendor
nwchem jacquard 5.0 nwchem NERSC; Vendor
q-chem bassi 3.0 qchem/3.0 NERSC; Vendor
q-chem bassi 3.1 qchem NERSC; Vendor
q-chem jacquard 3.1 qchem NERSC; Vendor
q-chem jacquard 3.1 serial qchem/3.1s NERSC; Vendor
(*) Denotes limited support
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Climate

PackagePlatformVersionModule Docs
(*) Denotes limited support
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Debugging

PackagePlatformVersionModule Docs
DDT franklin 2.3.1 ddt NERSC; Vendor
gdb davinci 6.3 none  Vendor
gdb franklin 6.3 none  Vendor
gdb jacquard 6.4 none  Vendor
idb davinci 8.1-11 intel  Vendor
Insure++ pdsf 5.2* Insure++/5.2  Vendor
pdbx bassi 4.1 not needed  Vendor
totalview bassi 8.0.1-0 totalview/8.0.1-0 NERSC; Vendor
totalview bassi 8.2.0-0 totalview/8.2.0-0 NERSC; Vendor
totalview bassi 8.3.0-0 totalview NERSC; Vendor
totalview bassi 8.4.1-3 totalview/8.4.1-3 NERSC; Vendor
totalview jacquard 8.1.0-0 totalview NERSC; Vendor
totalview jacquard 8.2.0-0 totalview/8.2.0-0 NERSC; Vendor
valgrind pdsf 1.9.6 valgrind/1.9.6  Vendor
valgrind pdsf 2.0.0 valgrind/2.0.0 NERSC; Vendor
valgrind pdsf 2.1.1 valgrind/2.1.1 NERSC; Vendor
(*) Denotes limited support
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General

PackagePlatformVersionModule Docs
Acroread bassi 5.0.11 acroread  Vendor
Acroread jacquard 5.0.9 none  Vendor
CTSS bassi none* CTSS  Vendor
cvs cvs 1.11.1p1 none NERSC; Vendor
MySQL bassi 5.0.51 mysql NERSC; Vendor
MySQL davinci 5.0.51 mysql NERSC; Vendor
MySQL franklin 4.0.27 none NERSC; Vendor
MySQL jacquard 4.1.16 mysql NERSC; Vendor
ROOT pdsf v3.03.09 ROOT  Vendor
ROOT pdsf v3.03.09 with gcc 3.2 ROOT/3.03.09_rh72_gcc32  Vendor
(*) Denotes limited support
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Material Sciences

PackagePlatformVersionModule Docs
ABINIT franklin 5.4.4* abinit/5.4 NERSC; Vendor
ABINIT jacquard 5.4.4* abinit/5.4 NERSC; Vendor
cpmd bassi 3.11.1* cpmd/3.11.1 NERSC; Vendor
cpmd franklin 3.11.1* cpmd/3.11.1 NERSC; Vendor
lammps bassi 2007.07* lammps/2007.07 NERSC; Vendor
lammps bassi 2008.06* lammps/2008.06 NERSC; Vendor
lammps franklin 2007.12* lammps NERSC; Vendor
lammps franklin 2008.06* lammps/2008.06 NERSC; Vendor
Qbox franklin 1.45.1* qbox NERSC; Vendor
Quantum Espresso bassi 3.2* espresso/3.2 NERSC; Vendor
Quantum Espresso bassi 4.0* espresso/4.0 NERSC; Vendor
Quantum Espresso franklin 4.0* espresso/4.0 NERSC; Vendor
siesta bassi 2.0.1* siesta/2.0.1 NERSC; Vendor
siesta franklin 2.0.1* siesta/2.0.1 NERSC; Vendor
siesta jacquard 2.0.1* siesta/2.0.1 NERSC; Vendor
vasp bassi 4.6.28 vasp NERSC; Vendor
vasp bassi 4.6.31 vasp/4.6.31 NERSC; Vendor
vasp franklin 4.6.28.pkent vasp NERSC; Vendor
vasp franklin 4.6.31 vasp/4.6.31 NERSC; Vendor
vasp jacquard 4.6.28 vasp/4.6.28 NERSC; Vendor
vasp jacquard 4.6.31 vasp NERSC; Vendor
wien2k bassi 2007.2* wien2k NERSC; Vendor
(*) Denotes limited support
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Mathematics

PackagePlatformVersionModule Docs
mathematica davinci 5.2 mathematica NERSC; Vendor
mathematica jacquard 5.2 mathematica NERSC; Vendor
matlab davinci 7.1.0.R14 matlab/7.1.0.R14 NERSC; Vendor
matlab davinci R2006a matlab NERSC; Vendor
matlab jacquard 7.1.0.R14 matlab/7.1.0.R14 NERSC; Vendor
matlab jacquard R2006a matlab NERSC; Vendor
R davinci 2.7.1* R  Vendor
(*) Denotes limited support
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Performance

PackagePlatformVersionModule Docs
IHPCT bassi 1.0 ihcpt NERSC; Vendor
IPM bassi 0.918 ipm  Vendor
IPM davinci 0.9122 ipm  Vendor
IPM franklin 0.920 ipm/0.920 NERSC; Vendor
IPM franklin 0.921 ipm NERSC; Vendor
IPM jacquard 0.918 ipm  Vendor
papi bassi 3.2.1 papi NERSC; Vendor
papi bassi 3.5.0 papi NERSC; Vendor
papi bassi 3.6.0 papi NERSC; Vendor
papi davinci 3.1.0 papi NERSC; Vendor
papi franklin 3.5.99b xt-papi/3.5.99b NERSC; Vendor
papi franklin 3.5.99c xt-papi/3.5.99c NERSC; Vendor
papi franklin 3.6.1a xt-papi NERSC; Vendor
papi franklin 3.6.2 xt-papi/3.6.2 NERSC; Vendor
papi jacquard 3.1.0 papi NERSC; Vendor
PE Benchmarker bassi 4.2 not needed  Vendor
tau bassi 2.16.4 tau NERSC; Vendor
tau bassi 2.16.4 64-bit tau_64 NERSC; Vendor
tau franklin 2.17.1 tau/2.17.1 NERSC; Vendor
tau franklin 2.17.2 tau NERSC; Vendor
tau jacquard 2.16.4 tau NERSC; Vendor
(*) Denotes limited support
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Physics

PackagePlatformVersionModule Docs
CFITSIO pdsf 2.470 fitsio  Vendor
(*) Denotes limited support
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Programming

PackagePlatformVersionModule Docs
cvs bassi 1.12.12 none NERSC; Vendor
cvs davinci 1.11.14 none NERSC; Vendor
cvs franklin 1.11.14 none NERSC; Vendor
cvs jacquard 1.11.14 none NERSC; Vendor
cvs pdsf 1.11.1p1  Vendor
cvs pdsf 1.11.2 cvs  Vendor
GNU bassi 1.0 GNU, GNU.tools NERSC; Vendor
GNU davinci 1.0 GNU NERSC; Vendor
GNU jacquard 1.0 GNU NERSC; Vendor
modules bassi 3.1.6 none NERSC; Vendor
modules davinci 3.1.6 not needed NERSC; Vendor
modules franklin 3.1.6 not needed NERSC; Vendor
modules jacquard 3.1.6 not needed NERSC; Vendor
modules pdsf 3.1.6 not needed NERSC; Vendor
perl bassi 5.8.2 not needed NERSC; Vendor
perl davinci 5.8.3 not needed NERSC; Vendor
perl franklin 5.8.3 not needed NERSC; Vendor
perl jacquard 5.8.3 not needed NERSC; Vendor
python bassi 2.4.2 python/2.4.2 NERSC; Vendor
python bassi 2.5.1 python/2.5.1 NERSC; Vendor
python bassi 2.5.2 python NERSC; Vendor
python davinci 2.3.3 not needed NERSC; Vendor
python franklin 2.3.3 none NERSC; Vendor
python franklin 2.5.2 python NERSC; Vendor
python jacquard 2.3.3 not needed NERSC; Vendor
python pdsf 2.2.1 python/2.2.1 NERSC; Vendor
python pdsf 2.2.2 python/2.2.2  Vendor
rcs jacquard 5.7* rcs  Vendor
subversion bassi 1.3.1 subversion NERSC; Vendor
subversion bassi 1.4.6 subversion NERSC; Vendor
subversion franklin 1.3.1 subversion/1.3.1 NERSC; Vendor
subversion franklin 1.4.5 subversion NERSC; Vendor
subversion franklin 1.5.0 subversion/1.5.0 NERSC; Vendor
tcl/tk bassi 8.4.11 tcltk NERSC; Vendor
(*) Denotes limited support
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Visualization

PackagePlatformVersionModule Docs
avs davinci 5.5 avs NERSC; Vendor
avs-express davinci 7.0 avs-express/7.0 NERSC; Vendor
avs-express davinci 7.1 avs-express/7.1 NERSC; Vendor
avs-express davinci 7.2 avs-express NERSC; Vendor
ensight davinci 8.0.4a ensight/8.0.4a NERSC; Vendor
ensight davinci 8.0.5a ensight/8.0.5a NERSC; Vendor
ensight davinci 8.0.6a ensight/8.0.6a NERSC; Vendor
ensight davinci 8.0.7g ensight/8.0.7g NERSC; Vendor
ensight davinci 8.2 ensight/8.2 NERSC; Vendor
ensight davinci 8.2.4a ensight NERSC; Vendor
ferret davinci 6.01* ferret NERSC; Vendor
ferret davinci 6.08* ferret NERSC; Vendor
ferret franklin 6.1* ferret NERSC; Vendor
ghostview jacquard 8.51 gs NERSC; Vendor
gimp davinci 2.0 gimp NERSC; Vendor
gnuplot bassi 4.0.0 gnuplot NERSC; Vendor
gnuplot davinci 4.1 not needed NERSC; Vendor
gnuplot franklin 3.7 none NERSC; Vendor
gnuplot franklin 4.2.3 gnuplot NERSC; Vendor
gnuplot jacquard 4.1 not needed NERSC; Vendor
gnuplot jacquard 4.2.3 gnuplot/4.2.3 NERSC; Vendor
grace bassi 5.1.19 grace NERSC; Vendor
grace davinci 5.1.19 grace NERSC; Vendor
grace jacquard 5.1.19 grace NERSC; Vendor
grads davinci 1.9b4* grads  Vendor
idl bassi 6.2 idl/6.2 NERSC; Vendor
idl bassi 6.3 idl/6.3 NERSC; Vendor
idl bassi 6.4 idl/6.4 NERSC; Vendor
idl davinci 6.1 idl/6.1 NERSC; Vendor
idl davinci 6.2 idl/6.2 NERSC; Vendor
idl davinci 6.3 idl/6.3 NERSC; Vendor
idl davinci 6.4 idl NERSC; Vendor
idl franklin 6.4 idl NERSC; Vendor
idl franklin 7.0 idl NERSC; Vendor
idl jacquard 6.2 idl/6.2 NERSC; Vendor
idl jacquard 6.3 idl/6.3 NERSC; Vendor
idl jacquard 6.4 idl NERSC; Vendor
ImageJ davinci 1.41* imagej  Vendor
ImageJ jacquard 1.41* imagej  Vendor
imagemagick davinci 5.5.7 not needed NERSC; Vendor
imagemagick jacquard 6.2.5 imagemagick NERSC; Vendor
imagemagick jacquard 6.3.9 imagemagick NERSC; Vendor
paraview davinci 2.0.2 paraview NERSC; Vendor
paraview davinci 2.5 paraview/2.5 NERSC; Vendor
paraview_mpi davinci 2.0.2 paraview/2.0.2_mpi NERSC; Vendor
paraview_mpi davinci 2.5 paraview/2.5_mpi NERSC; Vendor
rasmol davinci 2.7.2.1.1 rasmol NERSC; Vendor
tecplot davinci 360_2008 tecplot/360_2008  Vendor
visit davinci 1.10.0 visit NERSC; Vendor
visit davinci 1.11.1 visit NERSC; Vendor
visit davinci 1.7 visit NERSC; Vendor
visit davinci 1.8.0 visit NERSC; Vendor
visit davinci 1.9.0 visit NERSC; Vendor
vmd davinci 1.8.3 vmd NERSC; Vendor
vmd jacquard 1.8.3 vmd NERSC; Vendor
(*) Denotes limited support
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