NCI logo CGAP logo Cancer Genome Anatomy Project
SNP500Cancer Database
NCI > CGAP > SNP500Cancer > Search by SNP
Human Genome build 36.3, dbSNP build 129

Home


Search by Gene/
Chromosome/
Pathway


Search by SNP


HLA results


Assays


FTP


Links


Log In


What's new?
 
  SNPs matching: AR-08
dbSNP ID: rs1926927
SNP500Cancer ID: AR-08
Gene: AR
SNP Region: IVS2-35463A>G  
dbSNP
NCBI map
Ensembl map Entrez Gene

Surrounding Sequence    (GC Content=40%)
TTCTTTGAGTTATGAGTAACAAGTTAGGTAATACACTTAAAAGAGAATGTGC
TATACAAATACTGGTTCTTAAGACAGCTGTTGTTAATGTACTGAGTATTATG
CTTACCTCACAGGGTTATTGTGAGCATCAAATGGGATAATGGATTTGTAAGC
ATTTTGTTTAAAGTGTGATTCAAATGTTAAGAATTAGTAAAAATAGTAAAAG
AACAATTCATTCTCCATCCAGATGTTCTGTYCCCACTGTGACTTATGTGCTC
ATTCAGAGTTGTACAGAAAAACCTCCACTTAATTTTCACA(A/G)GCTGGAG
TTCCACATGTAACAGAATCATATGGGACCAAAAAATTCTCTGTATTGGCTTC
TTCCCTGCCGTATTTTGGCTCTGGGACCAACAAGACACCCATTTTGCATGAG
CTGCCTGCCACCAACTTTGCGCTCACATCTAGTTCTGTTGCCCNATGTGCAA
GCTGAATTTGGGCCCGGGCCCCCAGATCTAACATGAAACTCAAGTTTCCTTC
TGTTCAAACTGTCCAGGCATAATAGTCTTAAAGTCCGATGCCCAGCAGAGCC
GTAGATTTTTCACTGGCCAAAAATCAACATGAA
To link to the SNP in the Genewindow genome browser, click on the red SNP.
To view one of the other SNPs in this sequence, click on its IUPAC code.
Some SNPs in this sequence are not currently in the database.

SNP500Cancer: Frequency Data as determined from 102 SNP500Cancer controls:
Total Completed Genotypic Allelic
Female Male Female Male
102   AA AG GG A G A G A G
51/65
(0.785)
12/65
(0.185)
2/65
(0.031)
33/37
(0.892)
4/37
(0.108)
114/130
(0.877)
16/130
(0.123)
33/37
(0.892)
4/37
(0.108)
View Subpopulation Frequencies
Assays - the SNP500Cancer frequency results were obtained on the following
platforms - click to view primers, probes, and conditions:
  Sequencing    TaqMan

Search by SNP
  • by SNP identifier
    to display SNP details, allele and genotype frequencies
Enter the dbSNP ID or internal SNP ID: search hints


disclaimer