KBS Publications

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KBS Recent Publications 2002- present

Agrawal AA, Conner JK, Johnson MTJ, Wallsgrove R. 2002. Ecological genetics of an induced plant defense against herbivores: Additive genetic variance and costs of phenotypic plasticity. Evolution 56: 2206-2213.

Agrawal AA, Kosola KR, Parry D. 2002. Gypsy moth defoliation and N fertilization affect hybrid poplar regeneration following coppicing. Canadian Journal of Forest Research 32: 1491-1495.

Agrawal AA, Conner J, Stinchcombe J. 2004. Evolution of plant resistance and tolerance to frost damage. Ecology Letters 7: 1199-1208.

Ambus P, Robertson GP. 2006. The Effect of increased N deposition on nitrous oxide, methane, and carbon dioxide fluxes from unmanaged forest and grassland communities in Michigan. Biogeochemistry 79: 315-337.

Basso B, Ritchie JT. 2005. Impact of compost, manure and inorganic fertilizer on nitrate leaching and yield for a 6-year maize -alfalfa rotation in Michigan. Agriculture Ecosystems, and the Environment 108: 329-341.

Beaulieu JJ, Arango CP, Hamilton SK, Tank JL. 2008. The production and emission of nitrous oxide from headwater streams in the midwestern United States. Global Change Biology 14: 878-894.

Becker C, Boersma M. 2007. Effects of essential fatty acids on the reproduction of a generalist herbivore. Journal of Plankton Research 29: 463-470.

Bergsma TT, Robertson GP, Ostrom NE. 2002. Influence of soil moisture and land use history on denitrification end-products. Journal of Environmental Quality 31: 711-717.

Bird GW. 2003. Role of integrated pest management and sustainable development. Pages 73-85 in Maredia KS DD, Mota-Sanchez D,, ed. Integrated Pest Management in the Global Arena. Cambridge, Massachusetts, USA: CABI Publishing.

Bird GW, Harwood RR, Sanchez JE, Berney MF, Smeenk J, Smith JJ. 2004. Role of nematodes in nutrient cycling. Phytopathology 94: 129.

Bird GW, Brewer MJ. 2006. Innovative integrated pest management for sustainable systems. Pages 25-49 in Francis CR PC, Bird GW, ed. Developing and Extending Sustainable Agriculture: A New Social Contract. Binghampton, New York, USA: Haworth Press.

Birdsley J. 2002. Phylogeny of the tyrant flycatchers…. Auk 119: 715-734.

Blackwood CB, Marsh T, Kim SH, Paul EA. 2003. Terminal restriction fragment length polymorphism data analysis for quantitative comparison of microbial communities. Applied and Environmental Microbiology 69: 926-932.

Blackwood CB, Paul EA. 2003. Eubacterial community structure and population size within the soil light fraction, rhizosphere, and heavy fraction of several agricultural systems. Soil Biology and Biochemistry 35: 1245-1255.

Blackwood CB, Dell CJ, Smucker AJ, Paul EA. 2006. Eubacterial communities in different soil macroaggregate environments and cropping systems. Soil Biology and Biochemistry 38: 720-728.

Bradshaw HD, Schemske DW. 2003. Allele substitution at a flower colour locus produces a pollinator shift in monkeyflowers. Nature 426: 176-178.

Brassil CE. 2006. Can environmental variation generate positive indirect effects in a model of shared predation? American Naturalist 167: 43-54.

Buckley DH, Schmidt TM. 2002. Exploring the diversity of soil - a microbial rainforest. Pages 183-208 in Staley JT RA, ed. Biodiversity of Microbial Life: Foundation of Earth's Biosphere. New York, New York, USA: Wiley.

Buckley DH, Schmidt TM. 2003. Diversity and dynamics of microbial communities in soils from agroecosystems. Environmental Microbiology 5: 441-452.

Bunn SE, Thoms MC, Hamilton SK, Capon SJ. 2006. Flow variability in dryland rivers: Boom, bust and the bits in between. River Research and Applications 22: 179-186.

Burgin AJ, Hamilton SK. 2007. Have we overemphasized the role of denitrification in aquatic ecosystems? A review of nitrate removal pathways. Frontiers in Ecology and the Environment 5: 89-96.

Butler R, et al. 2007. Cyberinfrastructure for the analysis of ecological acoustic sensor data: a use case study in grid deployment. Cluster Computing 10: 301-310.

Cáceres CE, Tessier AJ. 2003. How long to rest:  the ecology of optimal dormancy and environmental constraint. Ecology 84: 1189-1198.

Cáceres CE, Tessier AJ. 2004. To sink or swim: Variable diapause strategies among Daphnia species. Limnology and Oceanography 49: 1333-1340.

Cáceres CE, Tessier AJ. 2004. Incidence of diapause varies among populations of Daphnia pulicaria. Oecologia 141: 425-431.

Cáceres CE, Hall SR, Duffy MA, Tessier AJ, Helmle C, MacIntyre S. 2006. Physical structure of lakes constrains epidemics in Daphnia populations. Ecology 87: 1438-1444.

Cáceres CE, Christoff AN, Boeing. WJ. 2007. Variation in ephippial buoyancy in Daphnia pulicaria. . Freshwater Biology 52: 313-318.

Caldeira K, Morgan MG, Baldocchi D, Brewer PG, Chen CTA, Nabuurs G-J, N.Nakicenovic, Robertson GP. 2004. A portfolio of carbon management options. Pages 103-130 in Field CB, Raupach MR, eds. The Global Carbon Cycle: Intergrating Humans, Climate, and the Natural World. New York, New York,: Island Press.

Chase JM, Leibold MA. 2002. Spatial scale dictates the productivity-diversity relationship. Nature 416: 427-430.

Chase JM. 2003. Experimental evidence for alternative stable equilibria in a benthic pond food web. Ecology Letters 6: 733-741.

Chase JM. 2003. Strong and Weak Trophic Cascades Along a Productivity Gradient. Oikos 101: 187-195.

Cohen GM, Shurin. JB. 2003. Scale-dependence and mechanisms of dispersal infreshwater zooplankton. Oikos 103: 603-617.

Conner JK, Neumeier R. 2002. The effects of ultraviolet-B radiation and intraspecific competition on growth, pollination success, and lifetime female fitness in Phacelia campanularia and P. purshii (Hydrophyllaceae). American Journal of Botany 89: 103-110.

Conner J. 2002. Genetic mechanisms of floral trait correlations in a natural population. Nature 420: 407-410.

Conner JK, Rice AM, Stewart C, Morgan MT. 2003. Patterns and mechanisms of selection on a family-diagnostic trait: evidence from experimental manipulation and lifetime fitness selection gradients. Evolution 57: 480-486.

Conner JK, Franks R, Stewart C. 2003. Expression of additive genetic variances and covariances for wild radish floral traits: Comparison between field and greenhouse environments. Evolution 57: 487-495.

Conner JK. 2003. Artificial selection: a powerful tool for ecologists. Ecology 84: 1650-1660.

Conner JK, Hartl DL. 2004. A primer of ecological genetics. Sunderland, Mass: Sinauer Associates.

Conner JK, Agrawal AA. 2005. Mechanisms of constraints: The contributions of selection and genetic variance to the maintenance of cotyledon number in wild radish. Journal of Evolutionary Biology 18: 238-242.

Costamagna AC, Landis DA. 2004. Effect of food resources on adult Glyptapanteles militaris and Meteorus communis (Hymenoptera : Braconidae), parasitoids of Pseudaletia unipuncta (Lepidoptera : Noctuidae). Environmental Entomology 33: 128-137.

Costamagna AC, Menalled FD, Landis DA. 2004. Host density influences parasitism of the armyworm Pseudaletia unipuncta in agricultural landscapes. Basic and Applied Ecology 5: 347-355.

Costamagna AC, Landis DA. 2006. Predators exert top-down control of soybean aphid across a gradient of agricultural management systems. Ecological Applications 16: 1619-1628.

Council for Agricultural Science and Technology (CAST). 2004. Climate Change and Greenhouse Gas Mitigation: Challenges and Opportunities for Agriculture. Ames, Iowa, USA: Task Force Report No. 141, Council for Agricultural Science and Technology (CAST).

Currie DJ, et al. 2004. Predictions and tests of climate-based hypotheses of broad-scale variation in taxonomic richness. Ecology Letters 7: 1121-1134.

Dalal RC, Wang W, Robertson GP, Parton WJ. 2003. Nitrous oxide emission from Australian agricultural lands and mitigation options: a review. Australian Journal of Soil Research 41: 165-195.

Darcy-Hall TL. 2006. Relative strengths of benthic algal nutrient and grazer limitation along a lake productivity gradient. Oecologia 148: 660-671.

Darcy-Hall TL, Hall SR. 2008. Linking limitation to species composition: importance of inter- and intra-specific variation in grazing resistance. . Oecologia 155: 797-808.

Davies P, Bunn SE, Hamilton SK. 2007. Primary production in tropical streams and rivers in Dudgeon D, ed. Tropical Stream Ecology: Elsevier Science.

Davis A, Renner KA, Gross KL. 2005. Weed seedbank and community shifts in a long-term cropping systems experiment . Weed Science 53: 296-306.

Davis AS, Cardina J, Forcella F, Johnson GA, Kegode G, Lindquist JL, Lusche EC, Renner KA, Sprague CL, Williams MM. 2005. Environmental factors affecting seed persistence of annual weeds across the US corn belt. Weed Science 53: 860-868.

Davis A, Renner K, Sprague C, Dyer L, Mutch D. 2005. Integrated Weed Management: One Year's Seeding. East Lansing, Michigan, USA: Michigan State University Extension E-2931.

Davis AS, Kathleen AI, Hallett SG, Renner KA. 2006. Weed seed mortality in soils with contrasting agricultural management histories. Weed Science 54: 291-297.

Dazzo FB. 2004. New CMEIAS image analysis software for computer-assisted microscopy of microorganisms and their ecology. . Microscopy Today 12: 18-23 

Dazzo FB. 2004. Applications of quantitative microscopy in studies of plant surface microbiology. Pages 503-550 in Varma A, Abbott L, Werner D, Hampp R, eds. Plant Surface Microbiology. Germany: Springer Verlag.

Dazzo FB. 2004. Production of anti-microbial antibodies and their utilization in studies of microbial autecology by immunofluorescence microscopy and in situ CMEIAS image analysis. Pages 911-932 in Kowalchuk GA, deBruijn F, Head I, Akkermans A, Elsas J, eds. Molecular Microbial Ecology Manual, 2nd ed. Dordrecht, The Netherlands: Kluwer.

Dazzo FB, Gao L. 2005. CMEIAS v. 1.28 Help User Manual. East Lansing, Michigan, USA: Center for Microbial Ecology, Michigan State University.

De Gryze S, Six J, Paustian K, Morris SJ, Paul EA, Merckx R. 2004. Soil organic carbon pool changes following land-use conversions. Global Change Biology 10: 1120-1132.

de Roos AM, Leonardsson K, Persson L, Mittelbach GG. 2002. Ontogenetic niche shifts and flexible behavior in size-structured populations. Ecological Monographs 72: 271-292.

DeMott WR, Tessier AJ. 2002. Stochiometric constaints versus algal defenses: Testing mechanisms of zooplankton food limitation. Ecology 83: 3426-3433.

DeMott WR, Edington JR, Tessier AJ. 2004. Testing zooplankton food limitaiton across gradients of dept and productivity in small…. Limnology and Oceanography 49: 1408-1416.

DeMott WR, Pape BJ, Tessier AJ. 2004. Patterns and sources of variation in Daphnia P-balance in nature. Aquatic Ecology 38: 433-440.

DeMott WR, Pape BJ. 2005. Stoichiometry in an ecological context:testing for links between Daphnia P-content, growth rate and habitatpreference. Oecologia 142: 20-27.

Dethlefsen L, Schmidt  TM. 2005. Differences in codon bias cannot explain differences in translational power among microbes. BMC Bioinformatics 6: 1471-2105.

Dodds WK, et al. 2002. N uptake as a function of concentration in streams. Journal of the North American Benthological Society 21: 206-220.

Dodds WK, et al. 2004. Carbon and nitrogen stoichiometry and nitrogen cycling rates in streams. Oecologia 140: 458-467.

Dorn NJ, Wojdak JM. 2004. The role of omnivorous crayfish in littoral communities. Oecologia 140: 150-159.

Dorn NJ, Mittelbach GG. 2004. Effects of a native crayfish (Orconectes virilis) on the reproductive success and nesting behavior of sunfish (Lepomis spp.) . Canadian Journal of Fisheries and Aquatic Sciences 61: 2135-2143.

Downing AL, Leibold MA. 2002. Ecosystem consequences of species richness and composition in pond food webs. Nature 416: 837-841.

Downing A. 2005. Relative effects of species composition and richness on ecosystem properties in ponds. Ecology 86: 701-715.

Dubois N, Getty T. 2003. Empty nests do not affect female mate choice or maternal investment in house wrens. Condor 105: 382-387.

Dubois NS, Kennedy ED, Getty T. 2006. Surplus nest boxes and the potential for polygyny affect clutch size and offspring sex ratios in house wrens. Proceedings of the Royal Society B- Biological Sciences 273: 1751-1757.

Dudycha JL. 2003. A multi-environment comparison of senescence between sister species of Daphnia. Oecologia 135: 555-563.

Dudycha JL. 2004. Mortality dynamics of Daphnia in contrasting habitats and their role in ecological divergence. Freshwater Biology 49: 505-514.

Duffy MA, Tessier AJ, Kosnik MA. 2004. Testing the ecological relevance of Daphnia species designations. Freshwater Biology 49: 55-64.

Duffy MA, Hall SR, Tessier AJ, Huebner M. 2005. Selective predators and their parasitized prey: Are epidemics in zooplankton under top-down control? Limnology and Oceanography 50: 412-420.

Duffy MA, Sivars-Becker L. 2007. Rapid evolution and ecological host-parasite dynamics. . Ecology Letters 10: 44-53.

Duffy MA. 2007. Selective predation, parasitism, and trophic cascades in a bluegill- Daphnia-parasite system. Oecologia 153: 453-460.

Duffy MA, Hall SR. 2008. Selective predation and rapid evolution can jointly dampen effects of virulent parasites on Daphnia Populations. American Naturalist 171: 499-510

Duffy MA, Brassil CE, Hall SR, Tessier AJ, Caceres CE, Conner JK. 2008. Parasite-mediated disruptive selection in a natural Daphnia population. BMC Evolutionary Biology 8: Article Number: 80.

Dwyer G. 2005. Should Models of Disease Dynamics in Herbivorous Insects Include the Effects of Variability in Host-Plant Foliage Quality? The American Naturalist 165: 16-31.

Ebert-May D, Williams KS, Weber EP, Hodder J, Luckie D. 2004. Practicing scientific inquiry: what are the rules? Frontiers in Ecology and the Environment 2: 492-493.

Eichorst SA, Breznak JA, Schmidt TM. 2007. Isolation and characterization of soil bacteria that define Teniglobus gen. nov., in the phylum Acidobacteria. Applied and Environmental Microbiology 73: 2708-2717.

Elwadie ME, Pierce FJ, Qi J. 2005. Remote sensing of canopy dynamics and biophysical variables estimation of corn in Michigan. Agronomy Journal 97: 99-105.

Emery SM, Gross KL, Suding KN. 2003. Summer burning bests controls spotted knapweed (Centaurea maculosa) populations in a Midwest prairie restoration. Ecological Restoration 21: 137-138.

Emery SM, Gross KL. 2005. Effects of timing of prescribed fire on the demography of an invasive plant, Centaurea maculosa spotted knapweed. Journal of Applied Ecology 42: 60-69.

Emery SM, Gross KL. 2006. Dominant species identity regulates invasibility of old-field plant communities. Oikos 115: 549-558.

Emery SM, Gross KL. 2007. Dominant species identity, not community evenness, regulates invasion in experimental grassland plant communities. Ecology 88 954-964.

Emery SM. 2007. Limiting similarity between invaders and dominant species in herbaceous plant communities? Journal of Ecology 95: 1027-1035.

Farber S, et al. 2006. Linking Ecology and Economics for Ecosystem Management. BioScience 56: 121-133.

Ferrao ADS, DeMott WR, Tessier AJ. 2005. Responses of tropical cladocerans to a gradient of resource quality. Freshwater Biology 50: 954-964.

Ferrão AD, Tessier AJ, DeMott WR. 2007. Sensitivity of herbivorous zooplankton to phosphorus deficient diets:Testing stoichiometric theory and the growth rate hypothesis. Limnology and Oceanography 52: 407-415.

Findlay S, et al. 2002. A cross-system comparison of bacterial and fungal biomass in detritus pools of headwater streams. Microbial Ecology 43: 55-66.

Fortuna AM, Harwood RR, Kizilkaya K, Paul EA. 2003. Optimizing nutrient availability and carbon sequestration in an agroecosystem. Soil Biology and Biochemistry 35: 1005-1013.

Fortuna AM, Paul EA, Harwood RR. 2003. The effects of compost and crop rotations on carbon turnover in the particulate organic matter fraction. Soil Science 168: 434-444.

Fortuna AM, Harwood RR, Robertson GP, Fisk JW, Paul EA. 2003. Seasonal changes in nitrification potential associated with application of N fertilizer and compost in maize systems of southwest Michigan. Agriculture Ecosystems and the Environment 97: 285-293.

Fox  TB, Landis DA, Cardoso FF, Difonzo CD. 2005. Impact of predation on establishment of the soybean aphid, Aphis glycines in soybean, Glycine max. BioControl 50: 545-563.

Francis CR, Poincelot CR, Bird GW, eds. 2006. Developing and Extending Sustainable Agriculture: A New Social Contract Binghamton, New York: Haworth Press.

Fuller RC. 2003. Disentangling female mate choice and male competition in the rainbow darter, Etheostoma caeruleum. Copeia 1: 138-148.

Gage SH, Gosz JR, Michener W. 2002. Site to regional scaling. Pages 37-41 in Withey A, Michener W, Tooby P, eds. Scalable Information Networks for the Environment. San Diego, California, USA: San Diego Supercomputer Center.

Gage SH. 2003. Climate variability in the North Central Region: Characterizing drought severity patterns. Pages 56-73 in Greenland D, Goodin D, Smith R, eds. Climate Variability and Ecosystem Response at Long Term Ecological Research Sites. Oxford, UK: Oxford University Press.

Gantner S, Schmid M, Durr C, Schuhegger R, Steidle A, Hutzler P, Langebartels C, Eberl L, Hartmann A, Dazzo FB. 2006. In situ quantitation of the spatial scale of calling distances and population density-independent N-acylhomoserine lactone-mediated communication by rhizobacteria colonized on plant roots. . FEMS Microbiology Ecology 56: 188-194.

Garcia EA, Mittelbach GG. 2008. Regional coexistence and local dominance in Chaoborus: Species sorting along a predation gradient. Ecology 89: 1703-1713.

Geml  J, Davis DD, Geiser DM. 2005. Systematics of the genus Sphaerobolus based on molecular and morphological data, with the description of Sphaerobolus ingoldii sp nov. Mycologia 97: 680-694.

Gerrish GA, Cáceres EC. 2003. Genetic versus environmental influence on pigment variation in the ephippia of Daphnia pulicaria. Freshwater Biology 48: 1971-1982.

Getty T. 2002. The Discriminating Babbler meets the Optimal-Diet Hawk. Animal Behaviour 63: 397-402.

Getty T. 2002. Signaling health versus parasites. American Naturalist 159: 363-371.

Getty T. 2004. A kind man benefits himself - but how? Evolutionary models of human food sharing. Behavioral & Brain Sciences 27: 563+.

Getty T. 2006. Sexually selected signals are not similar to sports handicaps. Trends in Ecology and Evolution 21: 83-88.

Getty T. 2007. In evolutionary games, enlightened self-interests are still ultimately self-interests. Behavioral & Brain Sciences 30: 25+.

Golubski AJ, Gross KL, Mittelbach GG. 2008. Competition among plant species that interact with their environment at different spatial scales. Proceeding of the Royal Society B - Biological Sciences 275: 1897-1906 

Grace PR, Jain MC, Harrington LW, Robertson GP. 2003. Long-term sustainability of the tropical and subtropical rice and wheat system: An environmental perspective. Pages 27-43 in Ladha JK, Hill JE, M.Duxbury J, Gupta RK, Buresh RJ, eds. Improving the Productivity and Sustainability of Rice-Wheat System: Issues and Impacts, vol. 65. Madison, Wisconsin: American Society of Agronomy.

Grace PR, Ladd JN, Robertson GP, Gage SH. 2006. SOCRATES - A simple model for predicting long-term changes in soil organic carbon in terrestrial ecosystems. Soil Biology and Biochemistry 38: 1172-1176.

Grace PR, Colunga-Garcia M, Gage SH, Safir GR, Robertson GP. 2006. The potential impact of agricultural management and climate change on soil organic carbon resources in terrestrial ecosystems of the North Central Region of the United States. Ecosystems 9: 816-827.

Grandy AS, Robertson GP. 2006. Initial cultivation of a temperate-region soil immediately accelerates aggregate turnover and CO2 and N2O fluxes. Global Change Biology 12: 1507-1520.

Grandy AS, Robertson GP. 2006. Aggregation and organic matter protection following tillage of a previously uncultivated soil. Soil Science Society of America Journal 70: 1398-1406.

Grandy AS, Loecke TD, Parr S, Robertson GP. 2006. Long-term trends in nitrous oxide emissions, soil nitrogen, and crop yields of till and no-till cropping systems. Journal of Environmental Quality 35: 1487-1495.

Grandy AS, Robertson GP, Thelen KD. 2006. Do productivity and environmental trade-offs justify periodically cultivating no-till cropping systems? Agronomy Journal 98: 1377-1383.

Grandy AS, Robertson GP. 2007. Land-use intensity effects on soil organic carbon accumulation rates and mechanisms. Ecosystems 10: 58-73.

Gross KL, Smith RG. 2002. Incorporating ecology into agriculture. Trends in Ecology and Evolution 17: 490-491.

Gross KL. 2004. Promoting ecological research in National Parks by investing in the next generation of scientists. Ecological Applications 14: 15-17.

Gross KL, Mittelbach GG, Reynolds HL. 2005. Grassland invasibility and diversity: Responses to nutrients, seed input, and disturbance. Ecology 86: 476-486.

Hall SR, Leibold MA, Lytle DA, Smith VH. 2004. Stoichiometry and planktonic grazer composition over gradients of light, nutrients, and predation risk. Ecology 85: 2291-2301.

Hall SR. 2004. Stoichiometrically-explicit competition between grazers: species replacement, coexistence, and priority effects along resource supply gradients. American Naturalist 164: 157-172.

Hall SR, Duffy MA, Cáceres CE. 2005. Selective predation and productivity jointly drive complex behavior in host-parasite systems. American Naturalist 165: 70-81.

Hall SR, Duffy MA, Tessier AJ, Cceres CE. 2005. Spatial heterogeneity of daphniid parasitism within lakes. Oecologia 143: 635-644.

Hall SR, Smith VH, Lytle DA, Leibold MA. 2005. Constraints on primary producer N:P stoichiometry along N:P supply ratio gradients. Ecology 86: 1894-1904.

Hall SR, Leibold MA, Lytle DA, Smith VH. 2006. Inedible producers in food webs: Controls on stoichiometric food quality and composition of grazers. American Naturalist 167: 628-637.

Hall SR, Tessier AJ, Duffy MA, Huebner M, Cáceres CE. 2006. Warmer does not have to mean sicker: temperature and predators can jointly drive timing of epidemics. Ecology 87: 1684-1695.

Hall SR, Shurin JB, Diehl S, Nisbet. RM. 2007. Food quality, nutrient limitation of secondary production, and the strength of trophic cascades. . Oikos 116: 1128-1143.

Hall SR, Sivars-Becker L, Becker C, Duffy MA, Tessier AJ, Cáceres CE. 2007. Eating yourself sick: transmission of disease as a function of foraging ecology. . Ecology Letters 10: 207-218.

Hall SR, Leibold MA, Lytle DA, Smith VH. 2007. Grazers, producer stoichiometry, and the light : nutrient hypothesis revisited. Ecology 88: 1142-1152.

Hamilton SK. 2002. Human impacts on hydrology in the Pantanal wetland of South

America. Water Science and Technology 45: 35-44.

Hamilton S, Sippel S, Melack J. 2002. Comparison of Inundation Patterns among Major South American Floodplains. Journal of Geophysical Research - Atmospheres 107: art. no. 8038.

Hamilton SK, Sippel SJ, Melack JM. 2004. Seasonal inundation patterns in two large savanna floodplains of South America: the Llanos de Moxos (Bolivia) and the Llanos del Orinoco (Venezuela and Colombia). Hydrological Processes 18: 2103-2116.

Hamilton SK, J.L.Tank, Raikow DF, Siler E, Dorn NJ, Leonard N. 2004. The role of instream vs allochthonous N in stream food webs: modeling the results of an isotope addition experiment. . Journal of the North  American Benthological Society 23: 429-448.

Hamilton SK, Sippel SJ, Bunn. SE. 2005. Separation of algae from detritus for stable isotope or ecological stoichiometry studies using density fractionation in colloidal silica. Limnology and Oceanography Methods 3: 149-157.

Hamilton SK, Bunn SE, Thoms M, Marshall JC. 2005. Persistence of aquatic refugia between flow pulses in a dryland river system (Cooper Creek, Australia). Limnology and Oceanography 50: 743-754.

Hamilton SK, Gehrke PC. 2005. Australia's tropical river systems: current scientific understanding and critical knowledge gaps for sustainable management. Marine and Freshwater Research 56: 243-252.

Hamilton SK, Kurzman AL, Arango C, Jin LX, Robertson GP. 2007. Evidence for carbon sequestration by agricultural liming. Global Biogeochemical Cycles 21: Art. No. GB2021.

Hamilton SK, Ostrom NE. 2007. Measurement of the stable isotope ratio of dissolved N-2 in N-15 tracer experiments. Limnology and Oceanography Methods 5: 233-240.

Hamilton SK, Kellndorfer J, Lehner B, Tobler M. 2007. Remote sensing of floodplain geomorphology as a surrogate for biodiversity in a tropical river system (Madre de Dios, Peru). Geomorphology 89: 23-38.

Hanson EJ, Throop PA, Serce S, Ravenscroft J, Paul EA. 2002. Comparison of nitrification rates in blueberry and forest soils. Journal of the American Society for Horticultural Science 127: 136-142.

Hao X, Kravchenko AN. 2007. Management practice effects on surface soil total carbon: Differences along a textural gradient. Agronomy Journal 99: 18-26.

Harris CK, Bailey C. 2002. Public preferences for a clean, green agricultural machine. Pages 31-42 in Harris CK, Molnar J, Tomazic T, Wimberley R, eds. The Social Risks of Agriculture: Americans Speak Out on Food. New York, New York, USA: Praeger.

Harris CK, Molnar J, Tomazic T, Wimberley R, eds. 2002. The Social Risks of Agriculture: Americans Speak Out on Food New York, New York, USA: Praeger.

Hawkins BA, et al. 2003. Energy, water, and broad-scale geographic patterns of species richness. Ecology 12: 3105-3117.

Horn R, Smucker A. 2005. Structure formation and its consequences for gas and water transport in unsaturated arable and forest soils. Soil & Tillage Research 82: 5-14.

Houseman GR, Gross KL. 2006. Does ecological filtering across a productivity gradient explain variation in species pool-richness relationships? Oikos 115: 148-154.

Houseman GR, Mittelbach GG, Reynolds HL, Gross KL. 2008. Perturbations alter community convergence, divergence, and formation of multiple community states. . Ecology 89: 2172-2180.

Howeth JG, Leibold MA. 2008. Planktonic dispersal dampens temporal trophic cascades in pond metacommunities. Ecology Letters 11: 245-257.

Jager CG, Diehl S, Matauschek C, Klausmeier CA, Stibor H. 2008. Transient dynamics of pelagic producer grazer systems in a gradient of nutrients and mixing depths. Ecology 89: 1272-1286.

Jin L, Williams E, Szramek K, Walter LM, Hamilton SK. 2008. Silicate and carbonate mineral weathering in soil profiles developed on Pleistocene glacial drift (Michigan, USA): Mass balances based on soil water geochemistry. Geochemica et Cosmochimica Acta 72: 1027-1042.

Jin LX, Hamilton SK, Walter LM. 2008. Mineral weathering rates in glacial drift soils (SW Michigan, USA): New constraints from seasonal sampling of waters and gases at soil monoliths. Chemical Geology 249: 129-154.

Johnson NC, Rowland DL, Corkidi L, Egerton-Warburton LM, Allen EB. 2003. Nitrogen enrichment alters mycorrhizal allocation at five mesic to semiarid grasslands. Ecology 84: 1895-1908.

Kaiser ME, Noma T, Brewer MJ, Pike KS, Vockeroth JR, Gaimari SD. 2007. Hymenopteran parasitoids and dipteran predators found using soybean aphid after its midwestern United States invasion. . Annals of the Entomological Society of America 100: 196-205.

Kaufman MG, Goodfriend W, Kohler-Garrigan A, Walker ED, Klug MJ. 2002. Soluble nutrient effects on microbial communities and mosquito production in Ochlerotatus triseriatushabitats. Aquatic Microbial Ecology 29: 73-88.

Kavdir Y, Smucker AJM. 2002. Soil aggregate sequestration of cover crop root and shoot residue nitrogen. Pages 134-142. Proceedings of the International Conference on Sustainable Land Use and Management. Turkey: Soil Science Society of Turkey.

Kavdir Y, Rasse DP, Smucker AJM. 2005. Specific contributions of decaying alfalfa roots to nitrate leaching in a Kalamazoo loam soil. Agriculture Ecosystems and Environment. 109: 97-106.

Kavdir Y, Smucker AJM. 2005. Soil aggregate sequestration of cover crop root and shoot-derived nitrogen. Plant and Soil 272: 263-276.

Kay KM, Schemske DW. 2004. Geographic patterns in plant-pollinator mutualistic networks: Comment. Ecology 85: 875-878.

Kerfoot WC, Mittelbach GG, Hairston NG, Elser JJ. 2004. Planktonic biodiversity: Scaling up and down. Limnology and Oceanography 49: 1225-1228.

Klausmeier CA, Litchman E, Levin. SA. 2007. A  model of flexible uptake of two essential resources. Journal of Theoretical Biology 246: 278-289.

Knapczyk FN, Conner JK. 2007. Estimates of the average strength of natural selection are not inflated by sampling error or publication bias. American Naturalist 170: 501-508.

Knoche S, Lupi F. 2007. Valuing deer hunting ecosystem services from farm landscapes. Ecological Economics 64: 313-320.

Knoll LB, Sarnelle O, Hamilton SK, Kissman CEH, Wilson AE, Rose JB, Morgan MR. 2008. Invasive zebra mussels (Dreissena polymorpha) increase cyanobacterial toxin concentrations in low-nutrient lakes. Canadian Journal of Fisheries and Aquatic Sciences 65: 448-455

Kosola KR, Dickmann DI, Parry. D. 2002. Carbohydrates in individual poplar fine roots- effects of root age and defoliation. Tree Physiology 22: 741-746.

Kosola KR, Dickmann DI, Hall RB, Workmaster BAA. 2004. Cottonwood growth rate and fine root condensed Tannin Concentration. Tree Physiology 24: 1063-1068.

Kosola KR, Durall DM, Robertson GP, Dickmann DI, Parry D, Russell CA, Paul EA. 2004. Resilience of mycorrhizal fungi on defoliated and fertilized hybrid poplars. Canadian Journal of Botany 82: 671-680.

Kosola KR, Parry D, Workmaster BA. 2006. Responses of condensed tannins in poplar roots to fertilization and gypsy moth defoliation. Tree Physiology 26: 1607-1611.

Kravchenko AN, Robertson GP, Thelen KD, Harwood RR. 2005. Management, topographical, and weather effects on spatial variability of crop grain yields. Agronomy Journal 97: 514-523.

Kravchenko AN, Robertson GP, Hao X, Bullock DG. 2006. Management practice effects on surface total carbon: Differences in spatial variability patterns. Agronomy Journal 98: 1559-1568.

Kravchenko AN, Robertson GP, Snapp SS, Smucker AJM. 2006. Using information about spatial variability to improve estimates of total soil carbon. Agronomy Journal 98: 823-829.

Kravchenko AN, Robertson GP. 2007. Can topographical and yield data substantially improve total soil carbon mapping by regression kriging? Agronomy Journal 99: 12-17.

Landis DA, Fox TB, Costamagna AC. 2004. Impact of multicolored Asian lady beetle as a biological control agent. . American Entomologist 50: 153-155.

Landis DA, Menalled FD, Costamagna AC, Wilkinson TK. 2005. Manipulating plant resources to enhance beneficial arthropods in agricultural landscapes. Weed Science 53: 902-908.

Lennon JT. 2007. Diversity and metabolism of marine bacteria cultivated on dissolved DNA. Applied and Environmental Microbiology 73: 2799-2805.

Lennon JT, Khatana SAM, Marston MF, Martiny JBH. 2007. Is there a cost of virus resistance in marine cyanobacteria? . ISME JOURNAL 1: 300-312.

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Litchman E, C. A. Klausmeier, J. R. Miller, O. M. Schofield, Falkowski PG. 2006. Multi-nutrient, multi-group model of  present and future oceanic phytoplankton communities. Biogeosciences 3: 585-606.

Litchman E, Klausmeier CA, Schofield OM, Falkowski. PG. 2007. The role of functional traits and trade-offs in structuring phytoplankton communities: scaling from cellular to ecosystem level. Ecology Letters 10: 1170-1181.

Lynch M, Thorn RG. 2006. Diversity of basidiomycetes in Michigan agricultural soils. Applied and Environmental Microbiology 72: 7050-7056.

Mahaney WM, Smemo KA, Gross KL. 2008. Impacts of C4 grass introductions on soil carbon and nitrogen cycling in C3-dominated successional systems. Oecologia 157: 295-305

McDermott TR, Dazzo FB. 2002. Use of fluorescent antibodies for studying the ecology of soil- and plant-associated microbes. Pages 615-626 in Hurst C CR, Knudsen GR, McInerney MJ, Stetzenbach LD, ed. Manual of Environmental Microbiology. Washington, DC, USA: American Society for Microbiology Press.

McGill B, Mittelbach GG. 2006. An allometric vision and motion model to predict prey encounter rates. Evolutionary Ecology Research 8: 691-701.

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Melack JM, Hess LL, Gastil M, Forsberg BR, Hamilton SK, Lima IBT, Novo EMLM. 2004. Regionalization of methane emissions in the Amazon Basin with microwave remote sensing. Global Change Biology 10: 530-544.

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Morris SJ, Robertson GP. 2005. Linking function between scales of resolution. Pages 13-26 in Dighton J, Oudemans PV, White JF, eds. The Fungal Community. New York, New York: Marcel Dekker.

Morris SJ, Bohm S, Haile-Mariam S, Paul EA. 2007. Evaluation of carbon accrual in afforested agricultural soils. Global Change Biology 13: 1145-1156.

Mosier AR, Halvorson AD, Peterson GA, Robertson GP, Sherrod L. 2005. Measurement of net global warming potential in three agroecosystems. Nutrient Cycling in Agroecosystems 72: 67-76.

Mulder K, Bowden WB. 2007. Organismal stoichiometry and the adaptive advantage of variable nutrient use and production efficiency in Daphnia. Ecological Modelling 202: 427-440.

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Mulholland PJ, et al. 2002. Can uptake lengths in streams be determined by nutrient addition experiments? : Results from an inter-biome comparison study. Journal of the North American Benthological Society 21: 544-560.

Mulholland PJ, Valett HM, Webster JR, Thomas SA, Cooper LW, Hamilton SK, Peterson BJ. 2004. Stream denitrification and total nitrate uptake rates measured using a field N-15 tracer addition approach. Limnology and Oceanography 49: 809-820.

Mulholland PJ, et al. 2008. Stream denitrification across biomes and effects of anthropogenic nitrate loading. Nature 452: 202-205.

Mutch D, Martin T, Kosola K. 2003. Red Clover (Trifolium pratense) Suppression of Common Ragweed (Ambrosia artemisiifolia) in Winter Wheat (Triticum aestivum). Weed Technology 17: 181-185.

Nesslage GM, Maurer BA, Gage SH. 2007. Gypsy moth response to landscape structure differs from neutral model predictions: implications for invasion monitoring. . Biological Invasions 9: 585-595.

Olendorf R, Getty T, Scribner K. 2004. Cooperative Nest Defence inRed-winged Blackbirds: Reciprocal Altruism, Kinship or By-product Mutualism? Proceedings of the Royal Society of London B 271: 177-182.

Olendorf R, Getty T, Scribner K, Robinson S. 2004. Male red-wingedblackbirds distrust unreliable and sexually attractive neighbours. Proceedings of the Royal Society of London Series B - Biological Sciences 271: 1033-1038.

O'Neal ME, Landis DA, Miller JR, Difonzo CD. 2004. Corn phenology influences Diabrotica virgifera virgifera emigration and visitation to soybean in laboratory assays. Environmental Entomology 33: 35-44.

Osenberg CW, Huckins CJ, Kaltenberg A, Martinez A. 2004. Resolving within- and between-population variation in feeding ecology with a biomechanical model of crushing force. Oecologia 141: 57-65.

Ostrom NE, Hedin LO, Fischer JCv, Robertson GP. 2002. Nitrogen transformations and NO3 removal at a soil-stream interface: a stable isotope approach. Ecological Applications 12: 1027-1043.

Ostrom NE, Pitt AJ, Sutka R, Ostrom PH, Grandy AS, Huizinga KM, Robertson GP. 2007. Isotopologue effects during N2O reduction in soils and in pure cultures of denitrifiers. . Journal of Geophysical Research - Biogeosciences 112: Art. No. G02005.

Park EJ, Smucker AJM. 2005. Erosive strengths of concentric regions within soil macroaggregates. Soil Science Society of America Journal 69: 1912-1921.

Park EJ, Smucker AJM. 2005. Saturated hydraulic conductivity and porosity within macroaggregates modified by tillage. Soil Science Society of America Journal 69: 38-45.

Park EJ, Smucker AJM. 2005. Dynamics of carbon sequestered in concentric layers of soil magroaggregates. Korean Journal of Ecology 28: 181-188.

Park EJ, Sul WJ, Smucker AJM. 2007. Glucose additions to aggregates subjected to drying/wetting cycles promote carbon sequestration and aggregate stability. Soil Biology & Biochemistry 39: 2758-2768.

Paul EA, Morris SJ, Six J, Paustian K, Gregorich EG. 2003. Interpretation of soil carbon and nitrogen dynamics in agricultural and afforested soils. Soil Science Society of America Journal 67: 1620-1628.

Paul EA, Morris SJ, Conant RT, Plante AF. 2006. Does the acid hydrolysis-incubation method measure meaningful soil organic carbon pools? Soil Science Society of America Journal 70: 1023-1035.

Pennings SC, Clark CM, Cleland EE, Collins SL, Gough L, Gross KL, Milchunas DG, Suding KN. 2005. Do individual plant species show predictable responses to nitrogen addition across multiple experiments? Oikos 110: 547-555.

Penton CR, Devol AH, Tiedje JM. 2006. Molecular evidence for the broad distribution of anaerobic ammonium-oxidizing bacteria in freshwater and marine sediments. Applied and Environmental Microbiology 72: 6829-6832.

Petchey OL, Downing AL, Mittelbach GG, Persson L, Steiner CF, Warren PH, Woodward G. 2004. Species loss and the structure and functioning of multitrophic aquatic systems. Oikos 104: 467-478.

Pietola L, Smucker AJM. 2006. Elimination of non-root residue by image analysis of very fine roots. Computers and Electronics in Agriculture 53: 92-97.

Porter J, et al. 2005. Wireless sensor networks for ecology. Bioscience 55: 561-572.

Raikow D. 2004. Food web interactions between larval bluegill (Lepomis macrochirus) and exotic zebra mussels (Dreissena polymorpha). Canadian Journal of Fisheries and Aquatic Sciences 61: 497-504.

Raikow DF, Sarnelle O, Wilson AE, Hamilton SK. 2004. Dominance of the noxious cyanobacterium Microcystis aeruginosa in low-nutrient lakes is associated with exotic zebra mussels. Limnology and Oceanography 49: 482-487.

Ramsey J, Schemske DW. 2002. Neopolyploidy in flowering plants. Annual Review of Ecology and Systematics 33: 589-639.

Reeves JB, Francis BA, Hamilton SK. 2005. Specular reflection and diffuse reflectance spectroscopy of soils. Applied Spectroscopy 59: 39-46.

Reid NJ, Hamilton SK. 2007. Controls on algal abundance in a eutrophic river with varying degrees of impoundment (Kalamazoo River, Michigan, USA). Lake and Reservoir Management 23: 219-230.

Reilly J, et al. 2003. U.S. agriculture and climate change: New results. Climatic Change 57: 43-69.

Rettig JE, Mittelbach GG. 2002. Interactions between adult and larval bluegill sunfish: positive and negative effects. Oecologia 130: 222-230.

Rettig JE. 2003. Zooplankton responses to predation by larval bluegill:an enclosure experiment. Freshwater Biology 48: 636-648.

Reynolds HL, Mittelbach GG, Darcy-Hall TL, Houseman GR, Gross KL. 2007. No effect of varying soil resource heterogeneity on plant species richness in a low fertility grassland. Journal of Ecology 95: 723-733.

Rillig MC, Ramsey PW, Morris S, Paul EA. 2003. Glomalin, an arbuscular-mycorrhizal fungal soil protein, responds to land-use change. Plant and Soil 253: 293-299.

Robertson GP, Broome JC, Chornesky EA, Frankenberger JR, Johnson P, Lipson M, Miranowski JA, Owens ED, Pimentel D, Thrupp LA. 2004. Rethinking the vision for environmental research in U.S. agriculture. BioScience 54: 61-65.

Robertson GP, Grace PR. 2004. Greenhouse gas fluxes in tropical and temperate agriculture: The need for a full-cost accounting of global warming potentials. Environment, Development and Sustainability 6: 51-63.

Robertson GP. 2004. Abatement of nitrous oxide, methane, and the other non-CO2 greenhouse gases: The need for a systems approach. Pages 493-506 in Field CB, Raupach MR, eds. The Global Carbon Cycle: Intergrating Humans, Climate, and the Natural World. Washington, DC: Island Press.

Robertson GP, Swinton. SM. 2005. Reconciling agricultural productivity and environmental integrity: A grand challenge for agriculture. Frontiers in Ecology and the Environment 3: 38-46.

Robertson GP, Groffman P. 2007. Nitrogen transformations. Pages 341-364 in Paul EA CF, ed. Soil Microbiology, Ecology, and Biochemistry. Oxford, UK: Elsevier Academic Press.

Rodrigues JLM, Duffy MA, Tessier AJ, Ebert D, Mouton L, Schmidt TM. 2008. Phylogenetic characterization and prevalence of "Spirobacillus cienkowskii," a red-pigmented, spiral-shaped bacterial pathogen of freshwater Daphnia species. . Applied and Environmental Microbiology 74: 1575-1582.

Roles AJ, Conner JK. 2008. Fitness effects of mutation accumulation in a natural outbred population of wild radish (Raphanus raphanistrum): Comparison of field and greenhouse environments. Evolution 62: 1066-1075.

Russell CA, Kosola KR, Paul EA, Robertson GP. 2004. Nitrogen cycling in poplar stands defoliated by insects. Biogeochemistry 68: 365-381.

Rutledge CE, O'Neil RJ, Fox TB, Landis DA. 2004. Soybean aphid predators and their use in integrated pest management. Annals of the Entomological Society of America 97: 240-248.

Sahli HF, Conner JK. 2006. Characterizing ecological generalization in plant-pollination systems. Oecologia 148: 365-372.

Sahli HF, Conner JK. 2007. Visitation, effectiveness, and efficiency of 15 genera of visitors to wild radish, Raphanus raphanismum (Brassicaceae). American Journal of Botany 94: 203-209.

Sanchez JE, Paul EA, Willson TC, Smeenk JP, Harwood RR. 2002. Corn root effects on the nitrogen-supplying capacity of a conditioned soil. Agronomy Journal 94: 391-396.

Sanchez JE, Harwood RR, Willson TC, Kizilkaya K, Smeenk J, Parker E, Paul EA, Knezek BD, Robertson GP. 2004. Managing soil carbon and nitrogen for productivity and environmental quality. Agronomy Journal 96: 769-775.

Sarnelle O, Wilson AE, Hamilton SK, Knoll LB, Raikow DF. 2005. Complex interactions between the zebra mussel, Dreissena polymorpha, and the harmful phytoplankter, Microcystis aeruginosa. Limnology and Oceanography 50: 896-904.

Schmidt TM. 2006. The maturing of microbial ecology. International Microbiology 9: 217-223.

Scriber JM, Keefover K, Nelson S. 2002. Hot summer temperatures may stop movement of Papilio canadensis butterflies and genetic introgression south of the hybrid zone in the North American Great Lakes Region. Ecography 25: 184-192.

Scriber JM. 2002. Evolution of insect-plant relationships; Chemical constraints, coadaptation and concordance of insect/plant traits. Entomologia Experimentalis et Applicata 104: 217-235.

Scriber JM. 2002. Latitudinal and local geographic mosaics in host plant preferences as shaped by thermal units and voltinism in Papilio spp. (Lepidoptera). European Journal of Entomology 99: 225-239.

Scriber JM, Deering M, Donovan J, Hereau H, Ording G, Stump A. 2002. Species at the edge: Island refuges, interspecific hybridization, and climate-driven range extensions of North American butterflies. Proceedings 10th Insects in Captivity Conference 10: 178-185.

Scriber JM, Stump A, Deering M. 2003. Hybrid zone ecology and tiger swallowtail trait clines in North America. Pages 367-391 in Boggs C WW, Erlich P, ed. Ecology and Evolution Taking Flight: Butterflies as Model Study Systems. Chicago, Illinois, USA: University of Chicago Press.

Scriber JM. 2004. Non-target impacts of forest defoliator management options: Decision for no spraying may have worse impacts on non-target Lepidoptera than Bacillus thuringiensis insecticides. Journal of Insect Conservation 8: 241-261.

Scriber JM, Ording GJ. 2005. Ecological speciation without host plant specialization: Possible origins of a recently described cryptic Papilio species. Entomologia Experimentalis et Applicata 115: 247-263.

Six J, Conant RT, Paul EA, Paustian K. 2002. Stabilization mechanisms of soil organic matter: Implications for C-saturation of soils. Plant and Soil 241: 155-176.

Six J, Callewaert P, Landers S, Gryze SD, Morris SJ, Gregorich RG, Paul EA, Paustian K. 2002. Measuring and understanding carbon storage in afforested soils by physical fractionation. Soil Science Society of America Journal 66: 1981-1987.

Smith RG, Gross KL, Januchowski S. 2005. Earthworms and weed seed distribution in annual crops. Agriculture Ecosystems and Environment 108: 363-367.

Smith RG, Gross KL. 2006. Weed community and corn yield variability in diverse management systems. Weed Science 54: 106-113.

Smith RG, Gross KL. 2006. Rapid change in the germinable fraction of the weed seed bank in crop rotations. Weed Science 54: 1094-1100.

Smith R. 2006. Timing of tillage is an important filter on the assembly of weed communities. Weed Science 54: 705-712.

Smith RG, Gross KL. 2007. Assembly of weed communities along a crop diversity gradient. Journal of Applied Ecology 44: 1046-1056.

Smith RG, Menalled FD, Robertson GP. 2007. Temporal yield variability under conventional and alternative management systems. Agronomy Journal 99: 1629-1634.

Smith RG, Gross KL, Robertson GP. 2008 Effects of crop diversity on agroecosystem function: Crop yield response. Ecosystems 11: 355-366.

Smucker AJM. 2002. Root contributions to soil structure. Pages 1273-1275 in Lal R, ed. Encyclopedia of Soil Science. New York, New York, USA: Marcel Dekker, Inc.

Smucker AJM, Kavdir Y. 2002. Biophysical infrastructures that promote carbon sequestration within soil aggregates. Pages 129-133. Proceedings of the International Conference on Sustainable Land Use and Management. . Turkey: Soil Science Society of Turkey.

Smucker AJM. 2003. Root carbon contributions to soil aggregate formation and function. Pages 421-426 in Abe J, ed. Roots: The Dynamic Interface between Plants and the Earth. The Netherlands: Kluwer Academic Publishers.

Smucker AJM, Park EJ, Dorner J, Horn R. 2007. Soil micropore development and contributions to soluble carbon transport within macroaggregates. Vadose Zone Journal 6: 282-290.

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Steiner CF. 2002. Context-dependent effects of Daphnia pulex on pond ecosystem function: observational and experimental evidence. Oecologia 131: 549-558.

Steiner C. 2003. Keystone predator effects and grazer control of planktonic primary production. Oikos 101: 569-577.

Steiner CF, Roy A. 2003. Seasonal succession in fishless ponds: effects of enrichment and invertebrate predators on zooplankton community structure. Hydrobiologia 490: 125-134.

Steiner CF. 2003. Variable dominance in pond planktonic communities: assessing spatial and temporal variation in competition and predation intensity. Ecology 84: 982-990.

Steiner CF, Leibold MA. 2004. Cyclic assembly trajectories and scale-dependent productivity-diversity relationships. Ecology 85: 107-113.

Steiner CF. 2004. Daphnia dominance and zooplankton community structure in fishless ponds. Journal of Plankton Research 26: 799-810.

Steiner CF. 2005. Temporal stability of pond zooplankton assemblages. Freshwater Biology 50: 105-112.

Steiner CF, Darcy-Hall TL, Dorn NJ, Garcia EA, Mittelbach GG, Wojdak JM. 2005. The influence of consumer diversity and indirect facilitation on trophic-level biomass and stability. Oikos 110: 556-566.

Stevenson BS, Eichorst SA, Wertz JT, Schmidt TM, Breznak JA. 2004. New strategies for cultivation and detection of previously uncultured microbes. Applied and Environmental Microbiology 70: 4748-4755.

Stieglitz M, R. B. McKane, Klausmeier. CA. 2006. A  simple model for analyzing climatic effects on terrestrial carbon and  nitrogen dynamics: an arctic case study. . Global Biogeochemical  Cycles 20: Art. No. GB3016.

Strauss SY, Sahli H, Conner JK. 2005. Toward a more trait-centered approach to diffuse (co)evolution. New Phytologist 165: 81-89.

Strauss SY, Lau JA, Schoener TW, Tiffin P. 2008. Evolution in ecological field experiments: implications for effect size. . Ecology Letters 11: 199-207

Stres B, Mahne I, Avgustin G, Tiedje JM. 2004. Nitrous oxide reductase (nosZ) gene fragments differ between native and cultivated Michigan soils. Applied and Environmental Microbiology 70: 301-309.

Suding KN, Gross KL, Houseman GR. 2004. Alternative states and positive feedbacks in restoration ecology. Trends in Ecology and Evolution 19: 46-53.

Suding KN, Collins SL, Gough L, Clark C, Cleland EE, Gross KL, Milchunas DG, Pennings. S. 2005. Functional- and abundance-based mechanisms explain diversity loss due to N fertilization. Proceedings of the National Academy of Sciences 102: 4387-4392.

Suding KN, Gross KL. 2006. Modifying Native and Exotic species richness correlations: the influence of fire and seed addition. Ecological Applications 16: 1319-1326.

Sutka RL, Ostrom NE, Ostrom PH, Breznak JA, Gandhi H, Pitt AJ, Li F. 2006. Distinguishing nitrous oxide production from nitrification and denitrification on the basis of isotopomer abundences. Applied and Environmental Microbiology 72: 638-644.

Suwanwaree P, Robertson GP. 2005. Methane oxidation in forest, successional, and no-till agricultural ecosystems: Effects of nitrogen and soil disturbance. Soil Science Society of America Journal 69: 1722-1729.

Swinton SM. 2005. As ecosystem services are demanded of agriculture, what of agricultural economists? Western Economics Forum 4: 21-23.

Swinton SM, Lupi F, Robertson GP, Landis DA. 2006. Ecosystem services from agriculture: Looking beyond the usual suspects. American Journal of Agricultural Economics 88: 1160-1166.

Swinton SM, Lupi F, Robertson GP, Hamilton SK. 2007. Ecosystem services and agriculture: Cultivating agricultural ecosystems for diverse benefits. Ecological Economics 64: 245-252.

Symstad AJ, Chapin FS, Wall DH, Gross KL, Huenneke LF, Mittelbach GG, Peters DPC, Tilman DG. 2003. Long-term and large-scale perspectives on the relationship between biodiversity and ecosystem functioning. BioScience 53: 89-98.

Tesar D, Scriber JM. 2002. Growth season constraints in climatic cold pockets: Tolerance of subfreezing temperatures and compensatory growth by tiger swallowtail butterfly larvae. Holarctic Lepidoptera 7: 39-44.

Tessier AJ, Woodruff. P. 2002. Trading off the ability to exploit rich versus poor food quality. Ecology Letters 5: 685-692.

Tessier AJ, Woodruff. P. 2002. Cryptic trophic cascade along a gradient of lake size. Ecology 83: 1263-1270.

Tessier A, Caceres C. 2004. Differentiation in sex investment by clones and populations of Daphnia. Ecology Letters 7: 695-703.

Thieme M, Lehner B, Abell R, Hamilton SK, Kellndorfer J, Powell G, Riveros JC. 2007. Freshwater conservation planning in data-poor areas: An example from a remote Amazonian basin (Madre de Dios River, Peru and Bolivia). Biological Conservation 135: 484-501

Treseder KK, Morris SJ, Allen MF. 2005. The contribution of root exudates, symbionts, and detritus to carbon sequestration in the soil. Pages 145-162 in Zobel RW, Wright SF, eds. Roots and Soil Management - Interactions between Roots and Soil. Madison, Wisconsin: American Society of Agronomy.

Webster JR, et al. 2003. Factors affecting ammonium uptake in streams - an inter-biome perspective. Freshwater Biology 48: 1329-1352.

Werner PA. 2005. Impact of feral water buffalo and fire on growth and survival of mature savanna trees: An experimental field study in Kakadu National Park, northern Australia. Austral Ecology 30: 625-647.

Werner PA, Cowie ID, Cusack JS. 2006. Juvenile tree growth and demography in response to feral water buffalo in savannas of northern Australia: an experimental field study in Kakadu National Park. Australian Journal of Botany 54: 283-296

Whitmire SL, Hamilton SK. 2005. Rapid removal of nitrate and sulfate in freshwater wetland sediments. Journal of Environmental Quality 34: 2062-2071.

Wilke BJ, Snapp SS. 2008. Winter cover crops for local ecosystems: linking plant traits and ecosystem function. . Journal of the Science of Food and Agriculture. 88: 1-557.

Wilson AE. 2003. Effects of zebra mussels on phytoplankton and ciliates: a field mesocosm experiment. Journal of Plankton Research 25: 905-915.

Wilson WG, Lundberg P, Vazquez DP, Shurin JB, Smith MD, Langford W, Gross KL, Mittelbach GG. 2003. Biodiversity and species interactions: extending Lotka-Volterra community theory. Ecology Letters 6: 944-952.

Wojdak JM. 2005. Relative strength of top-down, bottom-up, and consumer species richness effects on pond ecosystems. Ecological Monographs 75: 489-504.

Wojdak JM, Luttbeg B. 2005. Relative strengths of trait-mediated and density-mediated indirect effects of a predator vary with resource levels in a freshwater food chain. Oikos 111: 592-598.

Wojdak JM, Mittelbach GG. 2007. Consequences of niche overlap for ecosystem functioning: An experimental test with pond grazers. Ecology 88: 2072-2083.

Yoshiyama K, Klausmeier CA. 2008. Optimal cell size for resource uptake in fluids: A new facet of resource competition. . The American Naturalist 171: 59-70.

 

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