| | Articles Fluorescent RNA cytochemistry:
tracking gene transcripts in living cells Thoru Pederson PMCID: PMC29735 Exoribonuclease superfamilies:
structural analysis and phylogenetic distribution Yuhong Zuo and Murray
P. Deutscher PMCID: PMC56904 Sp1 phosphorylation regulates
inducible expression of platelet-derived growth factor B-chain gene
via atypical protein kinase C-ζ Louise A. Rafty and Levon
M. Khachigian PMCID: PMC29732 Statistical prediction of single-stranded
regions in RNA secondary structure and application to predicting effective
antisense target sites and beyond Ye Ding and Charles
E. Lawrence PMCID: PMC29728 Transcriptional activation by
hepatocyte nuclear factor-4 in a cell-free system derived from rat
liver nuclei Srinivas Harish, Tasneem Khanam, Sendurai Mani, and Pundi Rangarajan PMCID: PMC29722 Determination of the binding
constants of the centromere protein Cbf1 to all 16 centromere
DNAs of Saccharomyces cerevisiae Gerhard Wieland, Peter Hemmerich, Marianne Koch, Tanja Stoyan, Johannes Hegemann, and Stephan Diekmann PMCID: PMC29730 Identification of human DNA helicase
V with the far upstream element-binding protein Alessandro Vindigni, Alexander Ochem, Gianluca Triolo, and Arturo Falaschi PMCID: PMC29729 The Dictyostelium
discoideum family of Rho-related proteins Francisco Rivero, Heidrun Dislich, Gernot Glöckner, and Angelika A. Noegel PMCID: PMC29714 Functionality of the STNV translational
enhancer domain correlates with affinity for two wheat germ factors Rosalinde van Lipzig, Marc
Van Montagu, Marc Cornelissen, and Frank Meulewaeter PMCID: PMC29725 Ethidium derivatives bind to
G-quartets, inhibit telomerase and act as fluorescent probes for quadruplexes Florence Koeppel, Jean-François Riou, Abdelazize Laoui, Patrick Mailliet, Paola B. Arimondo, Delphine Labit, Odile Petitgenet, Claude Hélène, and Jean-Louis Mergny PMCID: PMC29720 Radical SAM, a novel protein
superfamily linking unresolved steps in familiar biosynthetic pathways
with radical mechanisms: functional characterization using new analysis
and information visualization methods Heidi J. Sofia, Guang Chen, Beth G. Hetzler, Jorge F. Reyes-Spindola, and Nancy E. Miller PMCID: PMC29726 Excision of 8-oxoguanine within
clustered damage by the yeast OGG1 protein Marie-Hélène David-Cordonnier, Serge Boiteux, and Peter O’Neill PMCID: PMC29723 PCR candidate region mismatch
scanning: adaptation to quantitative, high-throughput genotyping Martin Beaulieu, Garry
P. Larson, Louis Geller, Steven
D. Flanagan, and Theodore
G. Krontiris PMCID: PMC29718 Comparative mutational analysis
of cis-acting RNA signals for translational frameshifting
in HIV-1 and HTLV-2 Yang-Gyun Kim, Stefan Maas, and Alexander Rich PMCID: PMC29715 A nicked duplex decamer DNA
with a PEG6 tether L. Kozerski, A.
P. Mazurek, R. Kawecki, W. Bocian, P. Krajewski, E. Bednarek, J. Sitkowski, M.
P. Williamson, A.
J. G. Moir, and P.
E. Hansen PMCID: PMC29731 Characterization and mutational
analysis of yeast Dbp8p, a putative RNA helicase involved in ribosome biogenesis Marie-Claire Daugeron and Patrick Linder PMCID: PMC29721 Polysomal ribonuclease 1 exists
in a latent form on polysomes prior to estrogen activation of mRNA
decay Kristopher S. Cunningham, Mark N. Hanson, and Daniel R. Schoenberg PMCID: PMC29717 In vitro roles
of invariant helix–turn–helix motif residue R383
in σ54 (σN) Siva R. Wigneshweraraj, Akira Ishihama, and Martin Buck PMCID: PMC29711 RegA proteins from phage T4 and
RB69 have conserved helix–loop groove RNA binding motifs
but different RNA binding specificities Tapas K. Sengupta, Johnthan Gordon, and Eleanor
K. Spicer PMCID: PMC29736 GeneSplicer: a new computational
method for splice site prediction Mihaela Pertea, Xiaoying Lin, and Steven
L. Salzberg PMCID: PMC29713 Kinetics of formation of hypoxanthine
containing base pairs by HIV-RT: RNA template effects on the base substitution
frequencies Michael R. Valentine and John Termini PMCID: PMC29738 Y box-binding protein-1 binds
preferentially to
single-stranded nucleic acids and exhibits 3′→5′ exonuclease activity Hiroto Izumi, Toshihiro Imamura, Gunji Nagatani, Tomoko Ise, Tadashi Murakami, Hidetaka Uramoto, Takayuki Torigoe, Hiroshi Ishiguchi, Yoichiro Yoshida, Minoru Nomoto, Tatsuro Okamoto, Takeshi Uchiumi, Michihiko Kuwano, Keiko Funa, and Kimitoshi Kohno PMCID: PMC29712 Detection of alkali metal ions
in DNA crystals using state-of-the-art X-ray diffraction experiments Valentina Tereshko, Christopher
J. Wilds, George Minasov, Thaza P. Prakash, Martin A. Maier, Andrew Howard, Zdzislaw Wawrzak, Muthiah Manoharan, and Martin Egli PMCID: PMC29719 Prediction of operons in microbial
genomes Maria D. Ermolaeva, Owen White, and Steven
L. Salzberg PMCID: PMC29727 Translational control of human
p53 expression in yeast mediated by 5′-UTR–ORF
structural interaction Raja Mokdad-Gargouri, Khmaies Belhadj, and Ali Gargouri PMCID: PMC29724 Regulation of c-maf gene
expression by Pax6 in cultured cells Masaharu Sakai, Mohamed
S. Serria, Hiromi Ikeda, Kazuhiko Yoshida, Junko Imaki, and Shinzo Nishi PMCID: PMC29716 Phylogenetic relationships among
group II intron ORFs Steven Zimmerly, Georg Hausner, and Xu-chu Wu PMCID: PMC29734 Pituitary Ets-1 and GABP bind
to the growth factor regulatory sites of the rat prolactin promoter Rebecca E. Schweppe and Arthur Gutierrez-Hartmann PMCID: PMC29733 NAR Methods Online Escherichia coli strains
that allow antibiotic-free plasmid selection and maintenance by
repressor titration Rocky M. Cranenburgh, Julian
A. J. Hanak, Steven
G. Williams, and David
J. Sherratt PMCID: PMC29739 Isolation of anti-angiogenesis
antibodies from a large combinatorial repertoire by colony filter
screening Leonardo Giovannoni, Francesca Viti, Luciano Zardi, and Dario Neri PMCID: PMC29740 Identification of partial loss
of function p53 gene mutations utilizing a yeast-based functional
assay Gopala K. Kovvali, Bena Mehta, Charles B. Epstein, and Stuart G. Lutzker PMCID: PMC29741 Quantitative analysis of mRNA
amplification by in vitro transcription L. R. Baugh, A.
A. Hill, E.
L. Brown, and Craig
P. Hunter PMCID: PMC29742 |
