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Volume 24(1);  January 1, 1996
Research Articles
GenBank.
D A Benson, M Boguski, D J Lipman, and J Ostell
Nucleic Acids Res. 1996 January 1; 24(1): 1–5.
PMCID: PMC145592
The European Bioinformatics Institute (EBI) databases.
P Rodriguez-Tomé, P J Stoehr, G N Cameron, and T P Flores
Nucleic Acids Res. 1996 January 1; 24(1): 6–12.
PMCID: PMC145572
The Genome Sequence DataBase (GSDB): meeting the challenge of genomic sequencing.
G Keen, J Burton, D Crowley, E Dickinson, A Espinosa-Lujan, E Franks, C Harger, M Manning, S March, M McLeod, J O'Neill, A Power, M Pumilia, R Reinert, D Rider, J Rohrlich, J Schwertfeger, L Smyth, N Thayer, C Troup, and C Fields
Nucleic Acids Res. 1996 January 1; 24(1): 13–16.
PMCID: PMC145611
The PIR-International Protein Sequence Database.
D G George, W C Barker, H W Mewes, F Pfeiffer, and A Tsugita
Nucleic Acids Res. 1996 January 1; 24(1): 17–20.
PMCID: PMC145575
The SWISS-PROT protein sequence data bank and its new supplement TREMBL.
A Bairoch and R Apweiler
Nucleic Acids Res. 1996 January 1; 24(1): 21–25.
PMCID: PMC145613
The metabolic pathway collection from EMP: the enzymes and metabolic pathways database.
E Selkov, S Basmanova, T Gaasterland, I Goryanin, Y Gretchkin, N Maltsev, V Nenashev, R Overbeek, E Panyushkina, L Pronevitch, E Selkov, Jr, and I Yunus
Nucleic Acids Res. 1996 January 1; 24(1): 26–28.
PMCID: PMC145618
Compilation of DNA sequences of Escherichia coli K12 (ECD and ECDC; update 1995).
M Kröger and R Wahl
Nucleic Acids Res. 1996 January 1; 24(1): 29–31.
PMCID: PMC145621
EcoCyc: an encyclopedia of Escherichia coli genes and metabolism.
P D Karp, M Riley, S M Paley, and A Pelligrini-Toole
Nucleic Acids Res. 1996 January 1; 24(1): 32–39.
PMCID: PMC145574
Genes and proteins of Escherichia coli (GenProtEc).
M Riley and D B Space
Nucleic Acids Res. 1996 January 1; 24(1): 40.
PMCID: PMC145598
NRSub: a non-redundant database for Bacillus subtilis.
G Perrière, I Moszer, and T Gojobori
Nucleic Acids Res. 1996 January 1; 24(1): 41–45.
PMCID: PMC145565
YPD-A database for the proteins of Saccharomyces cerevisiae.
J I Garrels
Nucleic Acids Res. 1996 January 1; 24(1): 46–49.
PMCID: PMC145596
LISTA, LISTA-HOP and LISTA-HON: a comprehensive compilation of protein encoding sequences and its associated homology databases from the yeast Saccharomyces.
R Dölz, M O Mossé, P P Slonimski, A Bairoch, and P Linder
Nucleic Acids Res. 1996 January 1; 24(1): 50–52.
PMCID: PMC145566
FlyBase: the Drosophila database. The Flybase Consortium.
Nucleic Acids Res. 1996 January 1; 24(1): 53–56.
PMCID: PMC145580
Improvements to the GDB Human Genome Data Base.
K H Fasman, S I Letovsky, R W Cottingham, and D T Kingsbury
Nucleic Acids Res. 1996 January 1; 24(1): 57–63.
PMCID: PMC145602
Molecular probe data base (MPDB).
M G Campi, P Romano, E Thüroff, P Visconti, M A Manniello, B Iannotta, G Rondanina, F Molina, T Ruzzon, and L Santi
Nucleic Acids Res. 1996 January 1; 24(1): 64–67.
PMCID: PMC145620
Compilation of tRNA sequences and sequences of tRNA genes.
M Sprinzl, C Steegborn, F Hübel, and S Steinberg
Nucleic Acids Res. 1996 January 1; 24(1): 68–72.
PMCID: PMC145569
Small RNA database.
J Gu and R Reddy
Nucleic Acids Res. 1996 January 1; 24(1): 73–75.
PMCID: PMC145573
The uRNA database.
C Zwieb
Nucleic Acids Res. 1996 January 1; 24(1): 76–79.
PMCID: PMC145588
The Signal Recognition Particle Database (SRPDB).
N Larsen and C Zwieb
Nucleic Acids Res. 1996 January 1; 24(1): 80–81.
PMCID: PMC145589
The Ribosomal Database Project (RDP).
B L Maidak, G J Olsen, N Larsen, R Overbeek, M J McCaughey, and C R Woese
Nucleic Acids Res. 1996 January 1; 24(1): 82–85.
PMCID: PMC145599
Database on the structure of small ribosomal subunit RNA.
Y Van de Peer, S Nicolaï, P De Rijk, and R De Wachter
Nucleic Acids Res. 1996 January 1; 24(1): 86–91.
PMCID: PMC145606
Database on the structure of large ribosomal subunit RNA.
P De Rijk, Y Van de Peer, and R De Wachter
Nucleic Acids Res. 1996 January 1; 24(1): 92–97.
PMCID: PMC145594
The RNA modification database.
P F Crain and J A McCloskey
Nucleic Acids Res. 1996 January 1; 24(1): 98–99.
PMCID: PMC145609
The haemophilia A mutation search test and resource site, home page of the factor VIII mutation database: HAMSTeRS.
A I Wacey, G Kemball-Cook, H H Kazazian, S E Antonarakis, R Schwaab, P Lindley, and E G Tuddenham
Nucleic Acids Res. 1996 January 1; 24(1): 100–102.
PMCID: PMC145612
Haemophilia B (sixth edition): a database of point mutations and short additions and deletions.
F Giannelli, P M Green, S S Sommer, M C Poon, M Ludwig, R Schwaab, P H Reitsma, M Goossens, A Yoshioka, and G G Brownlee
Nucleic Acids Res. 1996 January 1; 24(1): 103–118.
PMCID: PMC145614
Databases and software for the analysis of mutations in the human p53 gene, the human hprt gene and the lacZ gene in transgenic rodents.
N F Cariello, G R Douglas, and T Soussi
Nucleic Acids Res. 1996 January 1; 24(1): 119–120.
PMCID: PMC145576
APC gene: database of germline and somatic mutations in human tumors and cell lines.
C Béroud and T Soussi
Nucleic Acids Res. 1996 January 1; 24(1): 121–124.
PMCID: PMC145597
Database of mutations that alter the large tumor antigen in simian virus 40.
T D Kierstead and J M Pipas
Nucleic Acids Res. 1996 January 1; 24(1): 125–126.
PMCID: PMC145579
PAH Mutation Analysis Consortium Database: a database for disease-producing and other allelic variation at the human PAH locus.
L Hoang, S Byck, L Prevost, and C R Scriver
Nucleic Acids Res. 1996 January 1; 24(1): 127–131.
PMCID: PMC145593
A cholinesterase genes server (ESTHER): a database of cholinesterase-related sequences for multiple alignments, phylogenetic relationships, mutations and structural data retrieval.
X Cousin, T Hotelier, P Liévin, J P Toutant, and A Chatonnet
Nucleic Acids Res. 1996 January 1; 24(1): 132–136.
PMCID: PMC145568
Software and database for the analysis of mutations in the human FBN1 gene.
G Collod, C Béroud, T Soussi, C Junien, and C Boileau
Nucleic Acids Res. 1996 January 1; 24(1): 137–140.
PMCID: PMC145600
Somatic point mutations in the p53 gene of human tumors and cell lines: updated compilation.
M Hollstein, B Shomer, M Greenblatt, T Soussi, E Hovig, R Montesano, and C C Harris
Nucleic Acids Res. 1996 January 1; 24(1): 141–146.
PMCID: PMC145616
p53 gene mutation: software and database.
C Béroud, F Verdier, and T Soussi
Nucleic Acids Res. 1996 January 1; 24(1): 147–150.
PMCID: PMC145567
The androgen receptor gene mutations database.
B Gottlieb, M Trifiro, R Lumbroso, D M Vasiliou, and L Pinsky
Nucleic Acids Res. 1996 January 1; 24(1): 151–154.
PMCID: PMC145582
The glucocorticoid receptor resource.
M Danielsen and E Martinez
Nucleic Acids Res. 1996 January 1; 24(1): 155–156.
PMCID: PMC145578
Protein C deficiency: summary of the 1995 database update.
P H Reitsma
Nucleic Acids Res. 1996 January 1; 24(1): 157–159.
PMCID: PMC145584
BTKbase, mutation database for X-linked agammaglobulinemia (XLA).
M Vihinen, T Iwata, C Kinnon, S P Kwan, H D Ochs, I Vorechovský, and C I Smith
Nucleic Acids Res. 1996 January 1; 24(1): 160–165.
PMCID: PMC145577
The 16S ribosomal RNA mutation database (16SMDB).
K L Triman
Nucleic Acids Res. 1996 January 1; 24(1): 166–168.
PMCID: PMC145603
The 23S Ribosomal RNA Mutation Database (23SMDB).
K L Triman
Nucleic Acids Res. 1996 January 1; 24(1): 169–171.
PMCID: PMC145608
A general database for DNA sequence changes induced by mutagenesis of several bacterial and mammalian genes.
F Hutchinson and J E Donnellan, Jr
Nucleic Acids Res. 1996 January 1; 24(1): 172–176.
PMCID: PMC145591
MITOMAP: a human mitochondrial genome database.
A M Kogelnik, M T Lott, M D Brown, S B Navathe, and D C Wallace
Nucleic Acids Res. 1996 January 1; 24(1): 177–179.
PMCID: PMC145607
The SWISS-2DPAGE database of two-dimensional polyacrylamide gel electrophoresis, its status in 1995.
R D Appel, J C Sanchez, A Bairoch, O Golaz, F Ravier, C Pasquali, G J Hughes, and D F Hochstrasser
Nucleic Acids Res. 1996 January 1; 24(1): 180–181.
PMCID: PMC145619
Progress with the PRINTS protein fingerprint database.
T K Attwood, M E Beck, A J Bleasby, K Degtyarenko, and D J Parry Smith
Nucleic Acids Res. 1996 January 1; 24(1): 182–188.
PMCID: PMC145564
The PROSITE database, its status in 1995.
A Bairoch, P Bucher, and K Hofmann
Nucleic Acids Res. 1996 January 1; 24(1): 189–196.
PMCID: PMC145570
The Blocks database--a system for protein classification.
S Pietrokovski, J G Henikoff, and S Henikoff
Nucleic Acids Res. 1996 January 1; 24(1): 197–200.
PMCID: PMC145590
The HSSP database of protein structure-sequence alignments.
R Schneider and C Sander
Nucleic Acids Res. 1996 January 1; 24(1): 201–205.
PMCID: PMC145595
The FSSP database: fold classification based on structure-structure alignment of proteins.
L Holm and C Sander
Nucleic Acids Res. 1996 January 1; 24(1): 206–209.
PMCID: PMC145583
The SBASE protein domain library, Release 4.0: a collection of annotated protein sequence segments.
J Murvai, A Gabrielian, P Fábián, Z Hátsagi, K Degtyarenko, H Hegyi, and S Pongor
Nucleic Acids Res. 1996 January 1; 24(1): 210–213.
PMCID: PMC145610
Codon usage tabulated from the international DNA sequence databases.
Y Nakamura, K Wada, Y Wada, H Doi, S Kanaya, T Gojobori, and T Ikemura
Nucleic Acids Res. 1996 January 1; 24(1): 214–215.
PMCID: PMC145571
TransTerm: a database of translational signals.
M E Dalphin, C M Brown, P A Stockwell, and W P Tate
Nucleic Acids Res. 1996 January 1; 24(1): 216–218.
PMCID: PMC145585
GRBase, a database linking information on proteins involved in gene regulation.
B Collier and M Danielsen
Nucleic Acids Res. 1996 January 1; 24(1): 219–220.
PMCID: PMC145604
The ENZYME data bank in 1995.
A Bairoch
Nucleic Acids Res. 1996 January 1; 24(1): 221–222.
PMCID: PMC145615
REBASE--restriction enzymes and methylases.
R J Roberts and D Macelis
Nucleic Acids Res. 1996 January 1; 24(1): 223–235.
PMCID: PMC145617
The Ribonuclease P Database.
J W Brown
Nucleic Acids Res. 1996 January 1; 24(1): 236–237.
PMCID: PMC145581
TRANSFAC: a database on transcription factors and their DNA binding sites.
E Wingender, P Dietze, H Karas, and R Knüppel
Nucleic Acids Res. 1996 January 1; 24(1): 238–241.
PMCID: PMC145586
MHCPEP--a database of MHC-binding peptides: update 1995.
V Brusic, G Rudy, A P Kyne, and L C Harrison
Nucleic Acids Res. 1996 January 1; 24(1): 242–244.
PMCID: PMC145587
Histone Sequence Database: a compilation of highly-conserved nucleoprotein sequences.
A D Baxevanis and D Landsman
Nucleic Acids Res. 1996 January 1; 24(1): 245–247.
PMCID: PMC145601
O-GLYCBASE: a revised database of O-glycosylated proteins.
J E Hansen, O Lund, J O Nielsen, J E Hansen, and S Brunak
Nucleic Acids Res. 1996 January 1; 24(1): 248–252.
PMCID: PMC145605
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