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Volume 4;  2007
Commentaries
Announcing the Andy Kaplan Prize and call for nominations
Alice Telesnitsky
Retrovirology. 2007; 4: 3. Published online 2007 January 18. doi: 10.1186/1742-4690-4-3.
PMCID: PMC1783665
Methylation: a regulator of HIV-1 replication?
Venkat RK Yedavalli and Kuan-Teh Jeang
Retrovirology. 2007; 4: 9. Published online 2007 February 2. doi: 10.1186/1742-4690-4-9.
PMCID: PMC1796896
Impact of the 16th International Conference on AIDS: can these conferences lead to policy change?
Helene Gayle and Mark A Wainberg
Retrovirology. 2007; 4: 13. Published online 2007 February 8. doi: 10.1186/1742-4690-4-13.
PMCID: PMC1802089
HIV/AIDS in Pakistan: the battle begins
Mohammad A Rai, Haider J Warraich, Syed H Ali, and Vivek R Nerurkar
Retrovirology. 2007; 4: 22. Published online 2007 March 21. doi: 10.1186/1742-4690-4-22.
PMCID: PMC1847529
The silent defense: Micro-RNA directed defense against HIV-1 replication
Ajit Kumar
Retrovirology. 2007; 4: 26. Published online 2007 April 12. doi: 10.1186/1742-4690-4-26.
PMCID: PMC1865552
Small non-coding RNAs, mammalian cells, and viruses: regulatory interactions?
Man Lung Yeung, Monsef Benkirane, and Kuan-Teh Jeang
Retrovirology. 2007; 4: 74. Published online 2007 October 15. doi: 10.1186/1742-4690-4-74.
PMCID: PMC2164956
microRNAs in viral oncogenesis
Vinod Scaria and Vaibhav Jadhav
Retrovirology. 2007; 4: 82. Published online 2007 November 24. doi: 10.1186/1742-4690-4-82.
PMCID: PMC2217556
Bridging fundamental RNA biology, retroviral replication, and oncogenesis: Karen Beemon wins the 2007 Retrovirology Prize
Kathleen Boris-Lawrie
Retrovirology. 2007; 4: 88. Published online 2007 December 10. doi: 10.1186/1742-4690-4-88.
PMCID: PMC2211504
Editorials
Impact factor, H index, peer comparisons, and Retrovirology: is it time to individualize citation metrics?
Kuan-Teh Jeang
Retrovirology. 2007; 4: 42. Published online 2007 June 18. doi: 10.1186/1742-4690-4-42.
PMCID: PMC1894640
The young, not-so-young, and the 2007 Retrovirology Prize: call for nominations
Kuan-Teh Jeang
Retrovirology. 2007; 4: 64. Published online 2007 September 17. doi: 10.1186/1742-4690-4-64.
PMCID: PMC2034386
World AIDS Day 2007: AIDS at 26, are we there yet?
Kuan-Teh Jeang
Retrovirology. 2007; 4: 86. Published online 2007 December 1. doi: 10.1186/1742-4690-4-86.
PMCID: PMC2169258
Hypothesis
APOBEC3G levels predict rates of progression to AIDS
Xia Jin, Hulin Wu, and Harold Smith
Retrovirology. 2007; 4: 20. Published online 2007 March 20. doi: 10.1186/1742-4690-4-20.
PMCID: PMC1832211
Research
Crystal structure of an FIV/HIV chimeric protease complexed with the broad-based inhibitor, TL-3
Holly Heaslet, Ying-Chuan Lin, Karen Tam, Bruce E Torbett, John H Elder, and C David Stout
Retrovirology. 2007; 4: 1. Published online 2007 January 9. doi: 10.1186/1742-4690-4-1.
PMCID: PMC1781954
SIVSM/HIV-2 Vpx proteins promote retroviral escape from a proteasome-dependent restriction pathway present in human dendritic cells
Caroline Goujon, Lise Rivière, Loraine Jarrosson-Wuilleme, Jeanine Bernaud, Dominique Rigal, Jean-Luc Darlix, and Andrea Cimarelli
Retrovirology. 2007; 4: 2. Published online 2007 January 9. doi: 10.1186/1742-4690-4-2.
PMCID: PMC1779362
Effect of chloroquine on reducing HIV-1 replication in vitro and the DC-SIGN mediated transfer of virus to CD4+ T-lymphocytes
Marloes A Naarding, Elly Baan, Georgios Pollakis, and William A Paxton
Retrovirology. 2007; 4: 6. Published online 2007 January 30. doi: 10.1186/1742-4690-4-6.
PMCID: PMC1796897
The testis and epididymis are productively infected by SIV and SHIV in juvenile macaques during the post-acute stage of infection
Miranda Shehu-Xhilaga, Stephen Kent, Jane Batten, Sarah Ellis, Joel Van der Meulen, Moira O'Bryan, Paul U Cameron, Sharon R Lewin, and Mark P Hedger
Retrovirology. 2007; 4: 7. Published online 2007 January 31. doi: 10.1186/1742-4690-4-7.
PMCID: PMC1805449
Analysis of the replication of HIV-1 forced to use tRNAMet(i) supports a link between primer selection, translation and encapsidation
Uros V Djekic and Casey D Morrow
Retrovirology. 2007; 4: 10. Published online 2007 February 2. doi: 10.1186/1742-4690-4-10.
PMCID: PMC1797187
No genetic evidence for involvement of Deltaretroviruses in adult patients with precursor and mature T-cell neoplasms
Thomas Burmeister, Stefan Schwartz, Michael Hummel, Dieter Hoelzer, and Eckhard Thiel
Retrovirology. 2007; 4: 11. Published online 2007 February 7. doi: 10.1186/1742-4690-4-11.
PMCID: PMC1802090
Rev-dependent lentiviral expression vector
Yuntao Wu, Margaret H Beddall, and Jon W Marsh
Retrovirology. 2007; 4: 12. Published online 2007 February 7. doi: 10.1186/1742-4690-4-12.
PMCID: PMC1797186
The HBZ-SP1 isoform of human T-cell leukemia virus type I represses JunB activity by sequestration into nuclear bodies
Patrick Hivin, Jihane Basbous, Frédéric Raymond, Daniel Henaff, Charlotte Arpin-André, Véronique Robert-Hebmann, Benoit Barbeau, and Jean-Michel Mesnard
Retrovirology. 2007; 4: 14. Published online 2007 February 16. doi: 10.1186/1742-4690-4-14.
PMCID: PMC1805765
Trans-inhibition of HIV-1 by a long hairpin RNA expressed within the viral genome
Pavlina Konstantinova, Olivier ter Brake, Joost Haasnoot, Peter de Haan, and Ben Berkhout
Retrovirology. 2007; 4: 15. Published online 2007 March 1. doi: 10.1186/1742-4690-4-15.
PMCID: PMC1819390
Antagonistic interaction of HIV-1 Vpr with Hsf-mediated cellular heat shock response and Hsp16 in fission yeast (Schizosaccharomyces pombe)
Zsigmond Benko, Dong Liang, Emmanuel Agbottah, Jason Hou, Lorena Taricani, Paul G Young, Michael Bukrinsky, and Richard Y Zhao
Retrovirology. 2007; 4: 16. Published online 2007 March 7. doi: 10.1186/1742-4690-4-16.
PMCID: PMC1828740
HIV-1 integrase inhibitors are substrates for the multidrug transporter MDR1-P-glycoprotein
Maurizio Cianfriglia, Maria Luisa Dupuis, Agnese Molinari, Antonio Verdoliva, Roberta Costi, Clementina Maria Galluzzo, Mauro Andreotti, Andrea Cara, Roberto Di Santo, and Lucia Palmisano
Retrovirology. 2007; 4: 17. Published online 2007 March 7. doi: 10.1186/1742-4690-4-17.
PMCID: PMC1828167
In-Silico docking of HIV-1 integrase inhibitors reveals a novel drug type acting on an enzyme/DNA reaction intermediate
Andrea Savarino
Retrovirology. 2007; 4: 21. Published online 2007 March 20. doi: 10.1186/1742-4690-4-21.
PMCID: PMC1847836
Rapamycin-induced inhibition of HTLV-I LTR activity is rescued by c-Myb
Nicola J Rose and Andrew ML Lever
Retrovirology. 2007; 4: 24. Published online 2007 April 3. doi: 10.1186/1742-4690-4-24.
PMCID: PMC1852806
Sequential emergence and clinical implications of viral mutants with K70E and K65R mutation in reverse transcriptase during prolonged tenofovir monotherapy in rhesus macaques with chronic RT-SHIV infection
Koen KA Van Rompay, Jeffrey A Johnson, Emily J Blackwood, Raman P Singh, Jonathan Lipscomb, Timothy B Matthews, Marta L Marthas, Niels C Pedersen, Norbert Bischofberger, Walid Heneine, and Thomas W North
Retrovirology. 2007; 4: 25. Published online 2007 April 6. doi: 10.1186/1742-4690-4-25.
PMCID: PMC1852805
hnRNP E1 and E2 have distinct roles in modulating HIV-1 gene expression
Kathryn Woolaway, Kengo Asai, Andrew Emili, and Alan Cochrane
Retrovirology. 2007; 4: 28. Published online 2007 April 23. doi: 10.1186/1742-4690-4-28.
PMCID: PMC1863430
Efficient inhibition of HIV-1 expression by LNA modified antisense oligonucleotides and DNAzymes targeted to functionally selected binding sites
Martin R Jakobsen, Joost Haasnoot, Jesper Wengel, Ben Berkhout, and Jørgen Kjems
Retrovirology. 2007; 4: 29. Published online 2007 April 26. doi: 10.1186/1742-4690-4-29.
PMCID: PMC1866241
Isolated receptor binding domains of HTLV-1 and HTLV-2 envelopes bind Glut-1 on activated CD4+ and CD8+ T cells
Sandrina Kinet, Louise Swainson, Madakasira Lavanya, Cedric Mongellaz, Amélie Montel-Hagen, Marco Craveiro, Nicolas Manel, Jean-Luc Battini, Marc Sitbon, and Naomi Taylor
Retrovirology. 2007; 4: 31. Published online 2007 May 15. doi: 10.1186/1742-4690-4-31.
PMCID: PMC1876471
Antigen-presenting particle technology using inactivated surface-engineered viruses: induction of immune responses against infectious agents
Joseph D Mosca, Yung-Nien Chang, and Gregory Williams
Retrovirology. 2007; 4: 32. Published online 2007 May 15. doi: 10.1186/1742-4690-4-32.
PMCID: PMC1885814
Immunogenicity of the outer domain of a HIV-1 clade C gp120
Hongying Chen, Xiaodong Xu, and Ian M Jones
Retrovirology. 2007; 4: 33. Published online 2007 May 17. doi: 10.1186/1742-4690-4-33.
PMCID: PMC1891314
HTLV-1 Tax mutants that do not induce G1 arrest are disabled in activating the anaphase promoting complex
Randall Merling, Chunhua Chen, Sohee Hong, Ling Zhang, Meihong Liu, Yu-Liang Kuo, and Chou-Zen Giam
Retrovirology. 2007; 4: 35. Published online 2007 May 29. doi: 10.1186/1742-4690-4-35.
PMCID: PMC1894815
Human Polycomb group EED protein negatively affects HIV-1 assembly and release
Dina Rakotobe, Jean-Claude Tardy, Patrice André, Saw See Hong, Jean-Luc Darlix, and Pierre Boulanger
Retrovirology. 2007; 4: 37. Published online 2007 June 4. doi: 10.1186/1742-4690-4-37.
PMCID: PMC1899515
Lentiviral vector design using alternative RNA export elements
Taekeun Oh, Ali Bajwa, Guangfu Jia, and Frank Park
Retrovirology. 2007; 4: 38. Published online 2007 June 5. doi: 10.1186/1742-4690-4-38.
PMCID: PMC1904242
Expression pattern analysis of transcribed HERV sequences is complicated by ex vivo recombination
Aline Flockerzi, Jochen Maydt, Oliver Frank, Alessia Ruggieri, Esther Maldener, Wolfgang Seifarth, Patrik Medstrand, Thomas Lengauer, Andreas Meyerhans, Christine Leib-Mösch, Eckart Meese, and Jens Mayer
Retrovirology. 2007; 4: 39. Published online 2007 June 6. doi: 10.1186/1742-4690-4-39.
PMCID: PMC1904241
Nuclear Factor 90(NF90) targeted to TAR RNA inhibits transcriptional activation of HIV-1
Emmanuel T Agbottah, Christine Traviss, James McArdle, Sambhav Karki, Georges C St Laurent, III, and Ajit Kumar
Retrovirology. 2007; 4: 41. Published online 2007 June 12. doi: 10.1186/1742-4690-4-41.
PMCID: PMC1910605
Persistence of attenuated HIV-1 rev alleles in an epidemiologically linked cohort of long-term survivors infected with nef-deleted virus
Melissa J Churchill, Lisa Chiavaroli, Steven L Wesselingh, and Paul R Gorry
Retrovirology. 2007; 4: 43. Published online 2007 July 1. doi: 10.1186/1742-4690-4-43.
PMCID: PMC1933581
Recovery of fitness of a live attenuated simian immunodeficiency virus through compensation in both the coding and non-coding regions of the viral genome
James B Whitney and Mark A Wainberg
Retrovirology. 2007; 4: 44. Published online 2007 July 3. doi: 10.1186/1742-4690-4-44.
PMCID: PMC1934378
Isolation and characterization of human cells resistant to retrovirus infection
Patrycja Lech and Nikunj V Somia
Retrovirology. 2007; 4: 45. Published online 2007 July 3. doi: 10.1186/1742-4690-4-45.
PMCID: PMC1925114
Impairment of alternative splice sites defining a novel gammaretroviral exon within gag modifies the oncogenic properties of Akv murine leukemia virus
Annette Balle Sørensen, Anders H Lund, Sandra Kunder, Leticia Quintanilla-Martinez, Jörg Schmidt, Bruce Wang, Matthias Wabl, and Finn Skou Pedersen
Retrovirology. 2007; 4: 46. Published online 2007 July 6. doi: 10.1186/1742-4690-4-46.
PMCID: PMC1936429
Inhibition of HIV-1 replication by P-TEFb inhibitors DRB, seliciclib and flavopiridol correlates with release of free P-TEFb from the large, inactive form of the complex
Sebastian Biglione, Sarah A Byers, Jason P Price, Van Trung Nguyen, Olivier Bensaude, David H Price, and Wendy Maury
Retrovirology. 2007; 4: 47. Published online 2007 July 11. doi: 10.1186/1742-4690-4-47.
PMCID: PMC1948018
Analysis of the contribution of cellular and viral RNA to the packaging of APOBEC3G into HIV-1 virions
Mohammad A Khan, Ritu Goila-Gaur, Sandrine Opi, Eri Miyagi, Hiroaki Takeuchi, Sandra Kao, and Klaus Strebel
Retrovirology. 2007; 4: 48. Published online 2007 July 16. doi: 10.1186/1742-4690-4-48.
PMCID: PMC1948019
Human T-lymphotropic virus type-1 p30 alters cell cycle G2 regulation of T lymphocytes to enhance cell survival
Antara Datta, Lee Silverman, Andrew J Phipps, Hajime Hiraragi, Lee Ratner, and Michael D Lairmore
Retrovirology. 2007; 4: 49. Published online 2007 July 16. doi: 10.1186/1742-4690-4-49.
PMCID: PMC1937004
CD4-independent use of the CCR5 receptor by sequential primary SIVsm isolates
Anna Laurén, Elzbieta Vincic, Hiroo Hoshino, Rigmor Thorstensson, and Eva Maria Fenyö
Retrovirology. 2007; 4: 50. Published online 2007 July 23. doi: 10.1186/1742-4690-4-50.
PMCID: PMC1950888
Primary T-cells from human CD4/CCR5-transgenic rats support all early steps of HIV-1 replication including integration, but display impaired viral gene expression
Christine Goffinet, Nico Michel, Ina Allespach, Hanna-Mari Tervo, Volker Hermann, Hans-Georg Kräusslich, Warner C Greene, and Oliver T Keppler
Retrovirology. 2007; 4: 53. Published online 2007 July 26. doi: 10.1186/1742-4690-4-53.
PMCID: PMC1971067
Intracellular HIV-1 Gag localization is impaired by mutations in the nucleocapsid zinc fingers
Boyan Grigorov, Didier Décimo, Fatima Smagulova, Christine Péchoux, Marylène Mougel, Delphine Muriaux, and Jean-Luc Darlix
Retrovirology. 2007; 4: 54. Published online 2007 August 3. doi: 10.1186/1742-4690-4-54.
PMCID: PMC1976323
The role of the N-terminal segment of CCR5 in HIV-1 Env-mediated membrane fusion and the mechanism of virus adaptation to CCR5 lacking this segment
Gregory B Melikyan, Emily J Platt, and David Kabat
Retrovirology. 2007; 4: 55. Published online 2007 August 8. doi: 10.1186/1742-4690-4-55.
PMCID: PMC1995219
Basal shuttle of NF-κB/IκBα in resting T lymphocytes regulates HIV-1 LTR dependent expression
Mayte Coiras, María Rosa López-Huertas, Joaquín Rullas, Maria Mittelbrunn, and José Alcamí
Retrovirology. 2007; 4: 56. Published online 2007 August 8. doi: 10.1186/1742-4690-4-56.
PMCID: PMC1988826
Endogenous TGF-β activation by reactive oxygen species is key to Foxp3 induction in TCR-stimulated and HIV-1-infected human CD4+CD25- T cells
Shoba Amarnath, Li Dong, Jun Li, Yuntao Wu, and WanJun Chen
Retrovirology. 2007; 4: 57. Published online 2007 August 9. doi: 10.1186/1742-4690-4-57.
PMCID: PMC2096626
High genetic variability of HIV-1 in female sex workers from Argentina
María A Pando, Lindsay M Eyzaguirre, Gladys Carrion, Silvia M Montano, José L Sanchez, Jean K Carr, and María M Avila
Retrovirology. 2007; 4: 58. Published online 2007 August 13. doi: 10.1186/1742-4690-4-58.
PMCID: PMC1971708
HIV-1 sequence evolution in vivo after superinfection with three viral strains
Karolina Kozaczynska, Marion Cornelissen, Peter Reiss, Fokla Zorgdrager, and Antoinette C van der Kuyl
Retrovirology. 2007; 4: 59. Published online 2007 August 23. doi: 10.1186/1742-4690-4-59.
PMCID: PMC2020475
Unintegrated HIV-1 provides an inducible and functional reservoir in untreated and highly active antiretroviral therapy-treated patients
Gaël Petitjean, Yassine Al Tabaa, Edouard Tuaillon, Clement Mettling, Vincent Baillat, Jacques Reynes, Michel Segondy, and Jean Pierre Vendrell
Retrovirology. 2007; 4: 60. Published online 2007 August 29. doi: 10.1186/1742-4690-4-60.
PMCID: PMC2048509
Targeting APOBEC3A to the viral nucleoprotein complex confers antiviral activity
Ritu Goila-Gaur, Mohammad A Khan, Eri Miyagi, Sandra Kao, and Klaus Strebel
Retrovirology. 2007; 4: 61. Published online 2007 August 29. doi: 10.1186/1742-4690-4-61.
PMCID: PMC2018723
Human immunodeficiency virus type 1 specific cytotoxic T lymphocyte responses in Chinese infected with HIV-1 B'/C Recombinant (CRF07_BC)
Jianping Chen, Kunxue Hong, Mingming Jia, Hongwei Liu, Yuanzhi Zhang, Sha Liu, Xiaoqing Zhang, Hongjing Zhao, Hong Peng, Pengfei Ma, Hui Xing, Yuhua Ruan, Katie L Williams, Xu G Yu, Marcus Altfeld, Bruce D Walker, and Yiming Shao
Retrovirology. 2007; 4: 62. Published online 2007 August 30. doi: 10.1186/1742-4690-4-62.
PMCID: PMC2018724
The HIV RNA setpoint theory revisited
Ronald B Geskus, Maria Prins, Jean-Baptiste Hubert, Frank Miedema, Ben Berkhout, Christine Rouzioux, Jean-Francois Delfraissy, and Laurence Meyer
Retrovirology. 2007; 4: 65. Published online 2007 September 21. doi: 10.1186/1742-4690-4-65.
PMCID: PMC2206052
Both TRIM5α and TRIMCyp have only weak antiviral activity in canine D17 cells
Julie Bérubé, Amélie Bouchard, and Lionel Berthoux
Retrovirology. 2007; 4: 68. Published online 2007 September 24. doi: 10.1186/1742-4690-4-68.
PMCID: PMC2064933
Characterization of the invariable residue 51 mutations of human immunodeficiency virus type 1 capsid protein on in vitro CA assembly and infectivity
Samir Abdurahman, Masoud Youssefi, Stefan Höglund, and Anders Vahlne
Retrovirology. 2007; 4: 69. Published online 2007 September 28. doi: 10.1186/1742-4690-4-69.
PMCID: PMC2064932
Human Immunodeficiency Virus Type 1 Nef protein modulates the lipid composition of virions and host cell membrane microdomains
Britta Brügger, Ellen Krautkrämer, Nadine Tibroni, Claudia E Munte, Susanne Rauch, Iris Leibrecht, Bärbel Glass, Sebastian Breuer, Matthias Geyer, Hans-Georg Kräusslich, Hans Robert Kalbitzer, Felix T Wieland, and Oliver T Fackler
Retrovirology. 2007; 4: 70. Published online 2007 October 1. doi: 10.1186/1742-4690-4-70.
PMCID: PMC2065869
Detection, characterization and regulation of antisense transcripts in HIV-1
Sébastien Landry, Marilène Halin, Sylvain Lefort, Brigitte Audet, Catherine Vaquero, Jean-Michel Mesnard, and Benoit Barbeau
Retrovirology. 2007; 4: 71. Published online 2007 October 2. doi: 10.1186/1742-4690-4-71.
PMCID: PMC2099442
Rapid spread of mouse mammary tumor virus in cultured human breast cells
Stanislav Indik, Walter H Günzburg, Pavel Kulich, Brian Salmons, and Francoise Rouault
Retrovirology. 2007; 4: 73. Published online 2007 October 11. doi: 10.1186/1742-4690-4-73.
PMCID: PMC2169256
Requirements for the selective degradation of CD4 receptor molecules by the human immunodeficiency virus type 1 Vpu protein in the endoplasmic reticulum
Julie Binette, Mathieu Dubé, Johanne Mercier, Dalia Halawani, Martin Latterich, and Éric A Cohen
Retrovirology. 2007; 4: 75. Published online 2007 October 15. doi: 10.1186/1742-4690-4-75.
PMCID: PMC2170451
The contribution of peroxynitrite generation in HIV replication in human primary macrophages
Stefano Aquaro, Carolina Muscoli, Alessandro Ranazzi, Michela Pollicita, Teresa Granato, Laura Masuelli, Andrea Modesti, Carlo-Federico Perno, and Vincenzo Mollace
Retrovirology. 2007; 4: 76. Published online 2007 October 21. doi: 10.1186/1742-4690-4-76.
PMCID: PMC2173904
Human immunodeficiency virus integrase inhibitors efficiently suppress feline immunodeficiency virus replication in vitro and provide a rationale to redesign antiretroviral treatment for feline AIDS
Andrea Savarino, Mauro Pistello, Daniela D'Ostilio, Elisa Zabogli, Fabiana Taglia, Fabiola Mancini, Stefania Ferro, Donatella Matteucci, Laura De Luca, Maria Letizia Barreca, Alessandra Ciervo, Alba Chimirri, Massimo Ciccozzi, and Mauro Bendinelli
Retrovirology. 2007; 4: 79. Published online 2007 October 30. doi: 10.1186/1742-4690-4-79.
PMCID: PMC2244644
The dimerization domain of HIV-1 viral infectivity factor Vif is required to block virion incorporation of APOBEC3G
James H Miller, Vlad Presnyak, and Harold C Smith
Retrovirology. 2007; 4: 81. Published online 2007 November 24. doi: 10.1186/1742-4690-4-81.
PMCID: PMC2222665
Antibody microarray analysis of cell surface antigens on CD4+ and CD8+ T cells from HIV+ individuals correlates with disease stages
Jing Qin Wu, Bin Wang, Larissa Belov, Jeremy Chrisp, Jenny Learmont, Wayne B Dyer, John Zaunders, Anthony L Cunningham, Dominic E Dwyer, and Nitin K Saksena
Retrovirology. 2007; 4: 83. Published online 2007 November 26. doi: 10.1186/1742-4690-4-83.
PMCID: PMC2212635
Localization of HIV-1 Vpr to the nuclear envelope: Impact on Vpr functions and virus replication in macrophages
Guillaume Jacquot, Erwann Le Rouzic, Annie David, Julie Mazzolini, Jérôme Bouchet, Serge Bouaziz, Florence Niedergang, Gianfranco Pancino, and Serge Benichou
Retrovirology. 2007; 4: 84. Published online 2007 November 26. doi: 10.1186/1742-4690-4-84.
PMCID: PMC2211753
Mortality associated with HIV-1, HIV-2, and HTLV-I single and dual infections in a middle-aged and older population in Guinea-Bissau
Birgitta Holmgren, Zacarias da Silva, Pernille Vastrup, Olav Larsen, Sören Andersson, Henrik Ravn, and Peter Aaby
Retrovirology. 2007; 4: 85. Published online 2007 November 27. doi: 10.1186/1742-4690-4-85.
PMCID: PMC2222662
Compartmentalization of the gut viral reservoir in HIV-1 infected patients
Guido van Marle, M John Gill, Dione Kolodka, Leah McManus, Tannika Grant, and Deirdre L Church
Retrovirology. 2007; 4: 87. Published online 2007 December 4. doi: 10.1186/1742-4690-4-87.
PMCID: PMC2217557
Asn 362 in gp120 contributes to enhanced fusogenicity by CCR5-restricted HIV-1 envelope glycoprotein variants from patients with AIDS
Jasminka Sterjovski, Melissa J Churchill, Anne Ellett, Lachlan R Gray, Michael J Roche, Rebecca L Dunfee, Damian FJ Purcell, Nitin Saksena, Bin Wang, Secondo Sonza, Steven L Wesselingh, Ingrid Karlsson, Eva-Maria Fenyo, Dana Gabuzda, Anthony L Cunningham, and Paul R Gorry
Retrovirology. 2007; 4: 89. Published online 2007 December 12. doi: 10.1186/1742-4690-4-89.
PMCID: PMC2225424
Dimerisation of HIV-2 genomic RNA is linked to efficient RNA packaging, normal particle maturation and viral infectivity
Anne L'Hernault, Jane S Greatorex, R Anthony Crowther, and Andrew ML Lever
Retrovirology. 2007; 4: 90. Published online 2007 December 13. doi: 10.1186/1742-4690-4-90.
PMCID: PMC2222663
HTLV-1 HBZ cooperates with JunD to enhance transcription of the human telomerase reverse transcriptase gene (hTERT)
Anne-Sophie Kuhlmann, Julien Villaudy, Louis Gazzolo, Marc Castellazzi, Jean-Michel Mesnard, and Madeleine Duc Dodon
Retrovirology. 2007; 4: 92. Published online 2007 December 13. doi: 10.1186/1742-4690-4-92.
PMCID: PMC2235888
Differential resistance to cell entry by porcine endogenous retrovirus subgroup A in rodent species
Giada Mattiuzzo, Magda Matouskova, and Yasuhiro Takeuchi
Retrovirology. 2007; 4: 93. Published online 2007 December 14. doi: 10.1186/1742-4690-4-93.
PMCID: PMC2241639
Role of the long cytoplasmic domain of the SIV Env glycoprotein in early and late stages of infection
Andrei N Vzorov, Armin Weidmann, Natalia L Kozyr, Vladimir Khaoustov, Boris Yoffe, and Richard W Compans
Retrovirology. 2007; 4: 94. Published online 2007 December 14. doi: 10.1186/1742-4690-4-94.
PMCID: PMC2242802
Ubiquitination of HTLV-I Tax in response to DNA damage regulates nuclear complex formation and nuclear export
Michael L Gatza, Tajhal Dayaram, and Susan J Marriott
Retrovirology. 2007; 4: 95. Published online 2007 December 14. doi: 10.1186/1742-4690-4-95.
PMCID: PMC2234431
Design of a trans protease lentiviral packaging system that produces high titer virus
Karen A Westerman, Zhujun Ao, Éric A Cohen, and Philippe Leboulch
Retrovirology. 2007; 4: 96. Published online 2007 December 28. doi: 10.1186/1742-4690-4-96.
PMCID: PMC2259377
Reviews
New pandemics: HIV and AIDS, HCV and chronic hepatitis, Influenza virus and flu
Anne Gatignol, Jean Dubuisson, Mark A Wainberg, Éric A Cohen, and Jean-Luc Darlix
Retrovirology. 2007; 4: 8. Published online 2007 February 1. doi: 10.1186/1742-4690-4-8.
PMCID: PMC1800864
Mechanisms of leukemogenesis induced by bovine leukemia virus: prospects for novel anti-retroviral therapies in human
Nicolas Gillet, Arnaud Florins, Mathieu Boxus, Catherine Burteau, Annamaria Nigro, Fabian Vandermeers, Hervé Balon, Amel-Baya Bouzar, Julien Defoiche, Arsène Burny, Michal Reichert, Richard Kettmann, and Luc Willems
Retrovirology. 2007; 4: 18. Published online 2007 March 16. doi: 10.1186/1742-4690-4-18.
PMCID: PMC1839114
Centrosome and retroviruses: The dangerous liaisons
Philippe V Afonso, Alessia Zamborlini, Ali Saïb, and Renaud Mahieux
Retrovirology. 2007; 4: 27. Published online 2007 April 14. doi: 10.1186/1742-4690-4-27.
PMCID: PMC1855351
Genetic and phylogenetic evolution of HIV-1 in a low subtype heterogeneity epidemic: the Italian example
Luigi Buonaguro, Maria Tagliamonte, Maria Lina Tornesello, and Franco M Buonaguro
Retrovirology. 2007; 4: 34. Published online 2007 May 21. doi: 10.1186/1742-4690-4-34.
PMCID: PMC1892567
The control of viral infection by tripartite motif proteins and cyclophilin A
Greg J Towers
Retrovirology. 2007; 4: 40. Published online 2007 June 12. doi: 10.1186/1742-4690-4-40.
PMCID: PMC1906832
Host factors influencing susceptibility to HIV infection and AIDS progression
Juan Lama and Vicente Planelles
Retrovirology. 2007; 4: 52. Published online 2007 July 25. doi: 10.1186/1742-4690-4-52.
PMCID: PMC1978541
Pathogenicity and immunogenicity of attenuated, nef-deleted HIV-1 strains in vivo
Paul R Gorry, Dale A McPhee, Erin Verity, Wayne B Dyer, Steven L Wesselingh, Jennifer Learmont, John S Sullivan, Michael Roche, John J Zaunders, Dana Gabuzda, Suzanne M Crowe, John Mills, Sharon R Lewin, Bruce J Brew, Anthony L Cunningham, and Melissa J Churchill
Retrovirology. 2007; 4: 66. Published online 2007 September 23. doi: 10.1186/1742-4690-4-66.
PMCID: PMC2075523
Identifying HIV-1 dual infections
Antoinette C van der Kuyl and Marion Cornelissen
Retrovirology. 2007; 4: 67. Published online 2007 September 24. doi: 10.1186/1742-4690-4-67.
PMCID: PMC2045676
HIV-1 drug-resistance and drug-dependence
Chris Baldwin and Ben Berkhout
Retrovirology. 2007; 4: 78. Published online 2007 October 25. doi: 10.1186/1742-4690-4-78.
PMCID: PMC2129100
Short Reports
Overlapping enhancer/promoter and transcriptional termination signals in the lentiviral long terminal repeat
Qing Yang, Aurore Lucas, Sodany Son, and Lung-Ji Chang
Retrovirology. 2007; 4: 4. Published online 2007 January 22. doi: 10.1186/1742-4690-4-4.
PMCID: PMC1802088
Retroviral activation of the mir-106a microRNA cistron in T lymphoma
Amy M Lum, Bruce B Wang, Lauri Li, Namitha Channa, Gabor Bartha, and Matthias Wabl
Retrovirology. 2007; 4: 5. Published online 2007 January 25. doi: 10.1186/1742-4690-4-5.
PMCID: PMC1794537
Mutation in the loop C-terminal to the cyclophilin A binding site of HIV-1 capsid protein disrupts proper virus assembly and infectivity
Samir Abdurahman, Stefan Höglund, Anders Höglund, and Anders Vahlne
Retrovirology. 2007; 4: 19. Published online 2007 March 19. doi: 10.1186/1742-4690-4-19.
PMCID: PMC1832212
Fully-spliced HIV-1 RNAs are reverse transcribed with similar efficiencies as the genomic RNA in virions and cells, but more efficiently in AZT-treated cells
Laurent Houzet, Zakia Morichaud, and Marylène Mougel
Retrovirology. 2007; 4: 30. Published online 2007 May 2. doi: 10.1186/1742-4690-4-30.
PMCID: PMC1868081
A real-time view of the TAR:Tat:P-TEFb complex at HIV-1 transcription sites
Dorothée Molle, Paolo Maiuri, Stéphanie Boireau, Edouard Bertrand, Anna Knezevich, Alessandro Marcello, and Eugenia Basyuk
Retrovirology. 2007; 4: 36. Published online 2007 May 30. doi: 10.1186/1742-4690-4-36.
PMCID: PMC1904240
Complete suppression of viral gene expression is associated with the onset and progression of lymphoid malignancy: observations in Bovine Leukemia Virus-infected sheep
Makram Merimi, Pavel Klener, Maud Szynal, Yvette Cleuter, Claude Bagnis, Pierre Kerkhofs, Arsène Burny, Philippe Martiat, and Anne Van den Broeke
Retrovirology. 2007; 4: 51. Published online 2007 July 23. doi: 10.1186/1742-4690-4-51.
PMCID: PMC1948017
Centrosomal pre-integration latency of HIV-1 in quiescent cells
Alessia Zamborlini, Jacqueline Lehmann-Che, Emmanuel Clave, Marie-Lou Giron, Joëlle Tobaly-Tapiero, Philippe Roingeard, Stéphane Emiliani, Antoine Toubert, Hugues de Thé, and Ali Saïb
Retrovirology. 2007; 4: 63. Published online 2007 September 10. doi: 10.1186/1742-4690-4-63.
PMCID: PMC2014762
Downregulation of CD94/NKG2A inhibitory receptors on CD8+ T cells in HIV infection is more pronounced in subjects with detected viral load than in their aviraemic counterparts
Mustapha Zeddou, Souad Rahmouni, Arnaud Vandamme, Nathalie Jacobs, Frédéric Frippiat, Philippe Leonard, Nicole Schaaf-Lafontaine, Dolores Vaira, Jacques Boniver, and Michel Moutschen
Retrovirology. 2007; 4: 72. Published online 2007 October 10. doi: 10.1186/1742-4690-4-72.
PMCID: PMC2098781
Isolated HIV-1 core is active for reverse transcription
David Warrilow, Deborah Stenzel, and David Harrich
Retrovirology. 2007; 4: 77. Published online 2007 October 24. doi: 10.1186/1742-4690-4-77.
PMCID: PMC2169257
Optimal design and validation of antiviral siRNA for targeting HIV-1
Yuki Naito, Kyoko Nohtomi, Toshinari Onogi, Rie Uenishi, Kumiko Ui-Tei, Kaoru Saigo, and Yutaka Takebe
Retrovirology. 2007; 4: 80. Published online 2007 November 8. doi: 10.1186/1742-4690-4-80.
PMCID: PMC2204037
Activation of HIV-1 expression and replication by cGMP dependent protein kinase type 1-β (PKG1β)
Jia Hai Lee, Venkat RK Yedavalli, and Kuan-Teh Jeang
Retrovirology. 2007; 4: 91. Published online 2007 December 13. doi: 10.1186/1742-4690-4-91.
PMCID: PMC2222664
Correction
Inhibition of HIV Env binding to cellular receptors by monoclonal antibody 2G12 as probed by Fc-tagged gp120
James M Binley, Stacie Ngo-Abdalla, Penny Moore, Michael Bobardt, Udayan Chatterji, Philippe Gallay, Dennis R Burton, Ian A Wilson, John H Elder, and Aymeric de Parseval
Retrovirology. 2007; 4: 23. Published online 2007 March 28. doi: 10.1186/1742-4690-4-23.
PMCID: PMC1847835
Corrects: James M Binley, et al. Inhibition of HIV Env binding to cellular receptors by monoclonal antibody 2G12 as probed by Fc-tagged gp120. Retrovirology. 2006; 3: 39.
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