| | Other Issues: latest | archiveA Single Vegetative Actin Isovariant Overexpressed under the Control of Multiple Regulatory Sequences Is Sufficient for Normal Arabidopsis Development Muthugapatti K. Kandasamy, Elizabeth C. McKinney, and Richard B. Meagher PMCID: PMC2671709 SHALLOT-LIKE1 Is a KANADI Transcription Factor That Modulates Rice Leaf Rolling by Regulating Leaf Abaxial Cell Development Guang-Heng Zhang, Qian Xu, Xu-Dong Zhu, Qian Qian, and Hong-Wei Xue PMCID: PMC2671703 Pheophytin Pheophorbide Hydrolase (Pheophytinase) Is Involved in Chlorophyll Breakdown during Leaf Senescence in Arabidopsis Silvia Schelbert, Sylvain Aubry, Bo Burla, Birgit Agne, Felix Kessler, Karin Krupinska, and Stefan Hörtensteiner PMCID: PMC2671698 Statolith Sedimentation Kinetics and Force Transduction to the Cortical Endoplasmic Reticulum in Gravity-Sensing Arabidopsis Columella Cells Guenther Leitz, Byung-Ho Kang, Monica E.A. Schoenwaelder, and L. Andrew Staehelin PMCID: PMC2671718 Characterization of Solanum tuberosum Multicystatin and Its Structural comparison with Other Cystatins Mark S. Nissen, G.N. Mohan Kumar, Buhyun Youn, D. Benjamin Knowles, Ka Sum Lam, W. Jordan Ballinger, N. Richard Knowles, and ChulHee Kang PMCID: PMC2671694 A Chloroplastic UDP-Glucose Pyrophosphorylase from Arabidopsis Is the Committed Enzyme for the First Step of Sulfolipid Biosynthesis Yozo Okazaki, Mie Shimojima, Yuji Sawada, Kiminori Toyooka, Tomoko Narisawa, Keiichi Mochida, Hironori Tanaka, Fumio Matsuda, Akiko Hirai, Masami Yokota Hirai, Hiroyuki Ohta, and Kazuki Saito PMCID: PMC2671695 Mitogen-Activated Protein Kinases 3 and 6 Are Required for Full Priming of Stress Responses in Arabidopsis thaliana Gerold J.M. Beckers, Michal Jaskiewicz, Yidong Liu, William R. Underwood, Sheng Yang He, Shuqun Zhang, and Uwe Conrath PMCID: PMC2671697 Roles for Arabidopsis CAMTA Transcription Factors in Cold-Regulated Gene Expression and Freezing Tolerance Colleen J. Doherty, Heather A. Van Buskirk, Susan J. Myers, and Michael F. Thomashow PMCID: PMC2671710 Epigenetic Regulation, Somatic Homologous Recombination, and Abscisic Acid Signaling Are Influenced by DNA Polymerase ε Mutation in Arabidopsis Haibo Yin, Xia Zhang, Jun Liu, Youqun Wang, Junna He, Tao Yang, Xuhui Hong, Qing Yang, and Zhizhong Gong PMCID: PMC2660612 Tendril-less Regulates Tendril Formation in Pea Leaves Julie Hofer, Lynda Turner, Carol Moreau, Mike Ambrose, Peter Isaac, Susan Butcher, James Weller, Adeline Dupin, Marion Dalmais, Christine Le Signor, Abdelhafid Bendahmane, and Noel Ellis PMCID: PMC2660626 The E3 Ubiquitin Ligase SCFTIR1/AFB and Membrane Sterols Play Key Roles in Auxin Regulation of Endocytosis, Recycling, and Plasma Membrane Accumulation of the Auxin Efflux Transporter PIN2 in Arabidopsis thaliana Jianwei Pan, Shozo Fujioka, Jianling Peng, Jianghua Chen, Guangming Li, and Rujin Chen PMCID: PMC2660622 The ER Chaperone LHS1 Is Involved in Asexual Development and Rice Infection by the Blast Fungus Magnaporthe oryzae Mihwa Yi, Myoung-Hwan Chi, Chang Hyun Khang, Sook-Young Park, Seogchan Kang, Barbara Valent, and Yong-Hwan Lee PMCID: PMC2660637 The Arabidopsis MYB5 Transcription Factor Regulates Mucilage Synthesis, Seed Coat Development, and Trichome Morphogenesis Song Feng Li, Olga Nicolaou Milliken, Hanh Pham, Reg Seyit, Ross Napoli, Jeremy Preston, Anna M. Koltunow, and Roger W. Parish PMCID: PMC2648076 Participation of Leaky Ribosome Scanning in Protein Dual Targeting by Alternative Translation Initiation in Higher Plants Yashitola Wamboldt, Saleem Mohammed, Christian Elowsky, Chris Wittgren, Wilson B.M. de Paula, and Sally A. Mackenzie PMCID: PMC2648075 discordia1 and alternative discordia1 Function Redundantly at the Cortical Division Site to Promote Preprophase Band Formation and Orient Division Planes in Maize Amanda J. Wright, Kimberly Gallagher, and Laurie G. Smith PMCID: PMC2648079 A Novel Polyamine Acyltransferase Responsible for the Accumulation of Spermidine Conjugates in Arabidopsis Seed Jie Luo, Christine Fuell, Adrian Parr, Lionel Hill, Paul Bailey, Katherine Elliott, Shirley A. Fairhurst, Cathie Martin, and Anthony J. Michael PMCID: PMC2648071 STARCH-EXCESS4 Is a Laforin-Like Phosphoglucan Phosphatase Required for Starch Degradation in Arabidopsis thaliana Oliver Kötting, Diana Santelia, Christoph Edner, Simona Eicke, Tina Marthaler, Matthew S. Gentry, Sylviane Comparot-Moss, Jychian Chen, Alison M. Smith, Martin Steup, Gerhard Ritte, and Samuel C. Zeeman PMCID: PMC2648081 Dynamic Evolution of Oryza Genomes Is Revealed by Comparative Genomic Analysis of a Genus-Wide Vertical Data Set Jetty S.S. Ammiraju, Fei Lu, Abhijit Sanyal, Yeisoo Yu, Xiang Song, Ning Jiang, Ana Clara Pontaroli, Teri Rambo, Jennifer Currie, Kristi Collura, Jayson Talag, Chuanzhu Fan, Jose Luis Goicoechea, Andrea Zuccolo, Jinfeng Chen, Jeffrey L. Bennetzen, Mingsheng Chen, Scott Jackson, and Rod A. Wing PMCID: PMC2630430 Functional Proteomics of Arabidopsis thaliana Guard Cells Uncovers New Stomatal Signaling Pathways Zhixin Zhao, Wei Zhang, Bruce A. Stanley, and Sarah M. Assmann PMCID: PMC2630442 Proteomic Identification and Characterization of a Novel Peroxisomal Adenine Nucleotide Transporter Supplying ATP for Fatty Acid β-Oxidation in Soybean and Arabidopsis Yuko Arai, Makoto Hayashi, and Mikio Nishimura PMCID: PMC2630451 Phosphate Availability Alters Lateral Root Development in Arabidopsis by Modulating Auxin Sensitivity via a Mechanism Involving the TIR1 Auxin Receptor Claudia-Anahí Pérez-Torres, José López-Bucio, Alfredo Cruz-Ramírez, Enrique Ibarra-Laclette, Sunethra Dharmasiri, Mark Estelle, and Luis Herrera-Estrella PMCID: PMC2630440 Characterization of the Arabidopsis Nitrate Transporter NRT1.6 Reveals a Role of Nitrate in Early Embryo Development Anabel Almagro, Shan Hua Lin, and Yi Fang Tsay PMCID: PMC2630450 Characterization of TCTP, the Translationally Controlled Tumor Protein, from Arabidopsis thaliana Oliver Berkowitz, Ricarda Jost, Stephan Pollmann, and Josette Masle PMCID: PMC2630444 Starch Granule Biosynthesis in Arabidopsis Is Abolished by Removal of All Debranching Enzymes but Restored by the Subsequent Removal of an Endoamylase Sebastian Streb, Thierry Delatte, Martin Umhang, Simona Eicke, Martine Schorderet, Didier Reinhardt, and Samuel C. Zeeman PMCID: PMC2630441 A SNARE Complex Unique to Seed Plants Is Required for Protein Storage Vacuole Biogenesis and Seed Development of Arabidopsis thaliana Kazuo Ebine, Yusuke Okatani, Tomohiro Uemura, Tatsuaki Goh, Keiko Shoda, Mitsuru Niihama, Miyo Terao Morita, Christoph Spitzer, Marisa S. Otegui, Akihiko Nakano, and Takashi Ueda PMCID: PMC2613668 NAC Family Proteins NARS1/NAC2 and NARS2/NAM in the Outer Integument Regulate Embryogenesis in Arabidopsis Tadashi Kunieda, Nobutaka Mitsuda, Masaru Ohme-Takagi, Seiji Takeda, Mitsuhiro Aida, Masao Tasaka, Maki Kondo, Mikio Nishimura, and Ikuko Hara-Nishimura PMCID: PMC2590734 A Gender-Specific Retinoblastoma-Related Protein in Volvox carteri Implies a Role for the Retinoblastoma Protein Family in Sexual Development Arash Kianianmomeni, Ghazaleh Nematollahi, and Armin Hallmann PMCID: PMC2570726 Comparative Genomics and Reverse Genetics Analysis Reveal Indispensable Functions of the Serine Acetyltransferase Gene Family in Arabidopsis Mutsumi Watanabe, Keiichi Mochida, Tomohiko Kato, Satoshi Tabata, Naoko Yoshimoto, Masaaki Noji, and Kazuki Saito PMCID: PMC2570737 Mutation of the Arabidopsis NRT1.5 Nitrate Transporter Causes Defective Root-to-Shoot Nitrate Transport Shan-Hua Lin, Hui-Fen Kuo, Geneviève Canivenc, Choun-Sea Lin, Marc Lepetit, Po-Kai Hsu, Pascal Tillard, Huey-Ling Lin, Ya-Yun Wang, Chyn-Bey Tsai, Alain Gojon, and Yi-Fang Tsay PMCID: PMC2570733 NAI2 Is an Endoplasmic Reticulum Body Component That Enables ER Body Formation in Arabidopsis thaliana Kenji Yamada, Atsushi J. Nagano, Momoko Nishina, Ikuko Hara-Nishimura, and Mikio Nishimura PMCID: PMC2570739 Functional Diversification of CLAVATA3-Related CLE Proteins in Meristem Maintenance in Rice Takuya Suzaki, Akiko Yoshida, and Hiro-Yuki Hirano PMCID: PMC2553609 Brassinosteroids Regulate Grain Filling in Rice Chuan-yin Wu, Anthony Trieu, Parthiban Radhakrishnan, Shing F. Kwok, Sam Harris, Ke Zhang, Jiulin Wang, Jianmin Wan, Huqu Zhai, Suguru Takatsuto, Shogo Matsumoto, Shozo Fujioka, Kenneth A. Feldmann, and Roger I. Pennell PMCID: PMC2553602 Comprehensive Flavonol Profiling and Transcriptome Coexpression Analysis Leading to Decoding Gene–Metabolite Correlations in Arabidopsis Keiko Yonekura-Sakakibara, Takayuki Tohge, Fumio Matsuda, Ryo Nakabayashi, Hiromitsu Takayama, Rie Niida, Akiko Watanabe-Takahashi, Eri Inoue, and Kazuki Saito PMCID: PMC2553606 Rpl33, a Nonessential Plastid-Encoded Ribosomal Protein in Tobacco, Is Required under Cold Stress Conditions Marcelo Rogalski, Mark A. Schöttler, Wolfram Thiele, Waltraud X. Schulze, and Ralph Bock PMCID: PMC2553612 RACK1 Functions in Rice Innate Immunity by Interacting with the Rac1 Immune Complex Ayako Nakashima, Letian Chen, Nguyen Phuong Thao, Masayuki Fujiwara, Hann Ling Wong, Masayoshi Kuwano, Kenji Umemura, Ken Shirasu, Tsutomu Kawasaki, and Ko Shimamoto PMCID: PMC2553611 SCREAM/ICE1 and SCREAM2 Specify Three Cell-State Transitional Steps Leading to Arabidopsis Stomatal Differentiation Masahiro M. Kanaoka, Lynn Jo Pillitteri, Hiroaki Fujii, Yuki Yoshida, Naomi L. Bogenschutz, Junji Takabayashi, Jian-Kang Zhu, and Keiko U. Torii PMCID: PMC2518248 The EPIP Peptide of INFLORESCENCE DEFICIENT IN ABSCISSION Is Sufficient to Induce Abscission in Arabidopsis through the Receptor-Like Kinases HAESA and HAESA-LIKE2 Grethe-Elisabeth Stenvik, Nora M. Tandstad, Yongfeng Guo, Chun-Lin Shi, Wenche Kristiansen, Asbjørn Holmgren, Steven E. Clark, Reidunn B. Aalen, and Melinka A. Butenko PMCID: PMC2518227 Arabidopsis 10-Formyl Tetrahydrofolate Deformylases Are Essential for Photorespiration Eva Collakova, Aymeric Goyer, Valeria Naponelli, Inga Krassovskaya, Jesse F. Gregory, III, Andrew D. Hanson, and Yair Shachar-Hill PMCID: PMC2518232 Dolichol Biosynthesis and Its Effects on the Unfolded Protein Response and Abiotic Stress Resistance in Arabidopsis Hairong Zhang, Kiyoshi Ohyama, Julie Boudet, Zhizhong Chen, Jilai Yang, Min Zhang, Toshiya Muranaka, Christophe Maurel, Jian-Kang Zhu, and Zhizhong Gong PMCID: PMC2518237 XopD SUMO Protease Affects Host Transcription, Promotes Pathogen Growth, and Delays Symptom Development in Xanthomonas-Infected Tomato Leaves Jung-Gun Kim, Kyle W. Taylor, Andrew Hotson, Mark Keegan, Eric A. Schmelz, and Mary Beth Mudgett PMCID: PMC2518228 The Cladosporium fulvum Virulence Protein Avr2 Inhibits Host Proteases Required for Basal Defense H. Peter van Esse, John W. van't Klooster, Melvin D. Bolton, Koste A. Yadeta, Peter van Baarlen, Sjef Boeren, Jacques Vervoort, Pierre J.G.M. de Wit, and Bart P.H.J. Thomma PMCID: PMC2518240 Mutation of Arabidopsis BARD1 Causes Meristem Defects by Failing to Confine WUSCHEL Expression to the Organizing Center Pei Han, Qing Li, and Yu-Xian Zhu PMCID: PMC2483370 Disrupting Two Arabidopsis thaliana Xylosyltransferase Genes Results in Plants Deficient in Xyloglucan, a Major Primary Cell Wall Component David M. Cavalier, Olivier Lerouxel, Lutz Neumetzler, Kazuchika Yamauchi, Antje Reinecke, Glenn Freshour, Olga A. Zabotina, Michael G. Hahn, Ingo Burgert, Markus Pauly, Natasha V. Raikhel, and Kenneth Keegstra PMCID: PMC2483363 Targeted Degradation of the Cyclin-Dependent Kinase Inhibitor ICK4/KRP6 by RING-Type E3 Ligases Is Essential for Mitotic Cell Cycle Progression during Arabidopsis Gametogenesis Jingjing Liu, Yiyue Zhang, Genji Qin, Tomohiko Tsuge, Norihiro Sakaguchi, Guo Luo, Kangtai Sun, Dongqiao Shi, Shiori Aki, Nuoyan Zheng, Takashi Aoyama, Atsuhiro Oka, Weicai Yang, Masaaki Umeda, Qi Xie, Hongya Gu, and Li-Jia Qu PMCID: PMC2483368 Analysis of the Golgi Apparatus in Arabidopsis Seed Coat Cells during Polarized Secretion of Pectin-Rich Mucilage Robin E. Young, Heather E. McFarlane, Michael G. Hahn, Tamara L. Western, George W. Haughn, and A. Lacey Samuels PMCID: PMC2483359 |
