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Virol J. 2008; 5: 65.
Published online 2008 May 27. doi: 10.1186/1743-422X-5-65.
PMCID: PMC2474605
Homologous recombination is unlikely to play a major role in influenza B virus evolution
Guan-Zhu Han,corresponding author#1,2 Xi-Ping Liu,#2 and Si-Shen Licorresponding author1
1National Key Laboratory of Crop Biology, College of Agronomy, Shandong Agricultural University, Tai'an 271018, China
2College of Life Science, Shandong Normal University, Jinan 250014, China
corresponding authorCorresponding author.
#Contributed equally.
Guan-Zhu Han: hanguanzhu/at/yahoo.com; Xi-Ping Liu: lixiping1988/at/yahoo.com.cn; Si-Shen Li: ssli/at/sdau.edu.cn
Received April 10, 2008; Accepted May 27, 2008.
Abstract
Influenza B viruses cause a significant amount of morbidity and mortality. The occurrence of homologous recombination in influenza viruses is controversial. To determine the extent of homologous recombination in influenza B viruses, recombination analyses of 2,650 sequences representing all eight segments of the influenza B viruses were carried out. Only four sequences were indentified as putative recombinants, which were verified using phylogenetic methods. However, the mosaics detected here were much likely to represent cases of laboratory-generated artificial recombinants. As in other myxoviruses, it is unlikely that homologous recombination plays a major role in influenza B virus evolution.