Fish Image
U.S. Food & Drug Administration
Seafood Products Research Center
Center for Food Safety & Applied Nutrition
Regulatory Fish Encyclopedia:
IEF Gel Lane Banding Pattern Peak Report Data
Gel Image

Peak Report Data from Isoelectric Focusing for a specimen of:
Chub Mackerel  ----  Go to Display Gel Lane Navigator.


FDA Seafood List Scientific Name: Scomber japonicus
FDA Seafood List Common Name: Chub Mackerel
FDA Seafood List Market Name: Mackerel, Chub
Unique IEF Gel Code: 19970219gel02
Unique Web Code: sjh01Srr
Tissue Aliquot Code: scomjapo I96-003 #01a Gel Analysis Conditions
Gel ImageFish ImageCalibrated Gel Image
Gel ImageFish ImageCalibrated Gel

DISPLAY GEL LANE NAVIGATOR
RETURN TO TOP OF THIS DOCUMENT
Lane a
pI Markers
Lane b
Specimen
Lane c
pI Markers
Lane d
Co-Migrated
Lane e
Specimen
Lane f
pI Markers
Go to Gel Schematic

 
DISPLAY GEL LANE LETTER: Lane a
DIGITAL REPORT GEL LANE: 2
LANE TYPE: pI Markers
ACTUAL GEL LANE: 2
Go to Gel Schematic
Return to Lane Navigator
BandpILoc% RFAmplitudeWidthIntegr. OD% Integr. OD% Lane IntODpIG. LocG. SigmaG. Ampl
14.55192.50.07425840.4645494.434.5519.53.90.0679178
25.211114.30.09638250.7705967.34.95.2110.84.80.0896609
35.8521928.30.060562230.3370643.22.15.85218.63.20.0590913
46.5535545.90.18937561.754716.611.26.55354.25.60.178093
56.85387500.077294260.6968796.64.46.85386.65.90.0668314
67.3545258.40.15695630.9422588.967.35451.83.40.155343
78.1558275.20.16697472.014581912.88.15581.76.80.167454
88.4564783.60.21098672.4463223.115.68.45646.26.70.206259
98.6570290.70.15557141.0700310.16.88.6570140.152774
109.375897.90.015698930.07905460.70.59.3757.82.60.0172532
PeakCounter: 10
DISPLAY GEL LANE LETTER: Lane b
DIGITAL REPORT GEL LANE: 3
LANE TYPE: Specimen
ACTUAL GEL LANE: 3
Go to Gel Schematic
Return to Lane Navigator
BandpILoc% RFAmplitudeWidthIntegr. OD% Integr. OD% Lane IntODpIG. LocG. SigmaG. Ampl
15.11410012.90.055793240.3642181.315.11499.73.60.0563203
25.19711214.50.10176650.8127272.82.35.197111.94.70.0979768
35.48715820.40.16620630.85103432.45.487157.42.80.171021
45.55716921.80.1058620.3551541.215.557168.61.80.11194
55.74619925.70.034714420.1116590.40.35.746198.81.90.033282
65.78420526.50.047184230.2556090.90.75.784204.53.10.0469168
75.90822729.30.095935340.6036642.11.75.9082273.50.0962175
85.94923530.40.024184940.1387580.50.45.949234.93.70.0210588
96.04525432.80.014381540.08442710.30.26.045253.63.70.012799
106.21328737.10.047815140.27983610.86.213285.83.90.0405136
BandpILoc% RFAmplitudeWidthIntegr. OD% Integr. OD% Lane IntODpIG. LocG. SigmaG. Ampl
116.34531340.40.064753330.28741210.86.345312.92.50.0646064
126.42132842.40.45983121.9999275.66.421328.52.40.468495
136.48234043.90.082689840.57382421.66.482339.53.80.0856186
146.522348450.2492431.1331643.26.522348.22.70.232738
156.60135946.40.45111721.44153546.601358.61.80.445512
166.74837548.40.071305180.8285642.92.36.7483787.60.0611198
177.1242054.30.14018341.000573.52.87.12420.84.20.135395
187.19142955.40.15604130.9450093.32.67.191429.13.30.159876
197.32644657.60.61233543.9104313.610.97.326445.83.60.60582
207.4457590.31571342.233467.86.27.4457.34.50.280126
BandpILoc% RFAmplitudeWidthIntegr. OD% Integr. OD% Lane IntODpIG. LocG. SigmaG. Ampl
217.51247561.40.46966332.628419.27.37.512474.83.10.471657
227.56248362.40.13480130.6346962.21.87.562482.92.60.138292
237.81152367.60.21787231.245714.33.57.8115233.40.209509
247.89853769.40.50585332.640419.27.47.898537.62.90.511244
258.36662580.70.014736130.07003320.20.28.366624.92.60.0152338
268.4263782.30.02371830.1294970.50.48.42636.530.0240758
278.4764983.90.048115330.2278630.80.68.47648.53.30.038769
288.5667487.10.0753539141.960186.85.58.56668.714.30.0770869
298.68570290.70.036846360.3159481.10.98.685704.360.0299324
309.30675597.50.056535960.6075822.11.79.306753.360.0568318
PeakCounter: 30
DISPLAY GEL LANE LETTER: Lane c
DIGITAL REPORT GEL LANE: 4
LANE TYPE: pI Markers
ACTUAL GEL LANE: 4
Go to Gel Schematic
Return to Lane Navigator
BandpILoc% RFAmplitudeWidthIntegr. OD% Integr. OD% Lane IntODpIG. LocG. SigmaG. Ampl
14.55182.30.05016840.3851264.83.24.5518.24.50.0484541
25.211414.70.077709960.808413106.85.2113.760.0759088
35.8521227.40.048252440.3116783.92.65.85211.73.80.0468575
46.5535245.50.17006461.778932214.96.55351.56.30.160364
56.8538549.70.056110150.4249895.33.56.85384.84.70.0514335
67.3544657.60.12677830.7511199.36.37.35445.53.30.128196
78.15573740.11698761.3300416.511.18.15572.56.50.115805
88.4564082.70.12528361.3694516.911.48.45639.66.20.124249
98.6569689.90.12347840.7823089.76.58.65695.33.60.121502
109.3751970.024538630.1392631.71.29.3751.230.025797
PeakCounter: 10
DISPLAY GEL LANE LETTER: Lane d
DIGITAL REPORT GEL LANE: 5
LANE TYPE: Co-Migrated
ACTUAL GEL LANE: 5
Go to Gel Schematic
Return to Lane Navigator
BandpILoc% RFAmplitudeWidthIntegr. OD% Integr. OD% Lane IntODpIG. LocG. SigmaG. Ampl
14.55192.40.039276230.23715910.94.5519.63.30.0399469
25.1099912.80.037321860.387481.61.55.1091006.30.0348752
35.211214.40.08317850.69811132.75.2111.44.90.0805969
45.43415219.60.095860830.4856792.11.95.434152.12.90.0954478
55.499163210.055376220.2236340.90.95.499162.72.30.0556874
65.66819224.70.0157321100.227410.95.668191.310.40.0123185
75.72120125.90.008759710.01475520.10.15.7212001.50.0056522
85.77421027.10.016453530.07599470.30.35.774210.52.80.0152753
95.8522328.70.028801140.1875120.80.75.85222.93.50.0299609
105.89923229.90.011927430.0666310.30.35.899231.13.10.0120012
BandpILoc% RFAmplitudeWidthIntegr. OD% Integr. OD% Lane IntODpIG. LocG. SigmaG. Ampl
116.17628336.50.035376160.3061161.31.26.176282.260.0285723
126.32931140.10.043127940.2618691.116.329311.13.70.0397644
136.42132842.30.38064831.738767.46.76.421328.42.50.386969
146.48734043.80.040860830.2287210.96.487340.830.0434554
156.535349450.21407841.472696.25.76.535349.94.30.195106
166.61635946.30.39413521.504656.45.86.616359.42.20.384701
176.77837748.60.04878430.2746661.21.16.778375.93.50.0448924
186.8538549.60.042178850.4158811.81.66.85383.95.20.0453428
197.1442154.30.090571650.6893592.92.77.14421.54.70.0825326
207.22943255.70.084852840.5548352.32.17.229431.23.70.0845972
BandpILoc% RFAmplitudeWidthIntegr. OD% Integr. OD% Lane IntODpIG. LocG. SigmaG. Ampl
217.36344957.90.54885243.5748415.113.87.363448.73.70.551653
227.43346059.30.20991741.376925.85.37.433459.73.90.196736
237.5447761.50.36870632.001988.57.77.54476.830.374623
247.57948362.20.096359130.47255521.87.579483.72.90.0906988
257.813520670.11888130.721973.12.87.813520.63.50.117764
267.91553669.10.40184432.387310.19.27.915536.13.50.388426
278.1557373.80.063444960.6730382.82.68.15572.75.90.0639261
288.31361178.70.021131440.1367020.60.58.313611.840.0192418
298.36462380.30.032551640.2637471.118.3646224.50.0330752
308.4564382.90.053499270.6495342.82.58.45641.87.20.0506367
BandpILoc% RFAmplitudeWidthIntegr. OD% Integr. OD% Lane IntODpIG. LocG. SigmaG. Ampl
318.537667860.036295690.5433542.32.18.537665.190.0339007
328.6569889.90.061996540.4306881.81.78.6569840.0608287
339.375597.30.040134450.3326321.41.39.3754.14.60.0408771
PeakCounter: 33
DISPLAY GEL LANE LETTER: Lane e
DIGITAL REPORT GEL LANE: 6
LANE TYPE: Specimen
ACTUAL GEL LANE: 6
Go to Gel Schematic
Return to Lane Navigator
BandpILoc% RFAmplitudeWidthIntegr. OD% Integr. OD% Lane IntODpIG. LocG. SigmaG. Ampl
15.1399812.60.044770130.2561570.90.75.139983.20.0453109
25.21510914.10.082787650.7553652.62.15.215109.25.50.0776425
35.47615319.70.13330830.6820842.31.95.476153.22.90.133096
45.54716521.30.077335820.29050610.85.5471652.10.0790973
55.74319825.50.019687320.09312850.30.35.743197.12.20.0241425
65.77920426.30.026978930.1587750.50.45.7792043.40.0262041
75.90322629.20.06453730.3876961.31.15.903225.43.40.0642148
85.93423229.90.018499340.1300920.40.45.934233.24.20.0173471
96.03425132.40.011915540.070470.20.26.034250.74.20.0095464
106.19628236.40.035643750.2605860.90.76.196281.74.60.0317793
BandpILoc% RFAmplitudeWidthIntegr. OD% Integr. OD% Lane IntODpIG. LocG. SigmaG. Ampl
116.33830939.90.062994640.4106691.41.26.338308.940.0573034
126.42832642.10.4307832.0535575.86.428325.72.60.440549
136.48533743.50.059446830.3294151.10.96.485336.12.60.072328
146.53334644.60.22227231.224894.23.46.533345.73.30.210607
156.61135645.90.40652921.7582564.96.611355.82.50.398873
166.74937147.90.052111550.4346591.51.26.749372.84.90.0498952
177.15542154.30.12928540.8129922.82.37.155420.93.70.125284
187.22543055.50.13384340.8958332.57.225429.83.80.133237
197.35644757.70.60005643.7056312.610.47.356446.93.60.584091
207.43245959.20.27759952.022286.95.77.432458.84.70.245128
BandpILoc% RFAmplitudeWidthIntegr. OD% Integr. OD% Lane IntODpIG. LocG. SigmaG. Ampl
217.5447661.40.41826832.454658.36.97.54476.43.30.423995
227.5948462.50.11122540.6596022.21.97.59484.23.50.106147
237.81852067.10.15793330.9430373.22.67.818520.53.30.160324
247.913535690.42863432.562148.77.27.913534.83.30.434037
258.34861979.90.011909230.0592450.20.28.348618.22.80.0117548
268.39963181.40.024835730.1580590.50.48.399630.93.50.0256849
278.45764583.20.042628940.3131231.10.98.457644.44.20.0417264
288.5667386.80.106346183.1546510.78.98.56673.7180.0988807
298.66769990.20.0918289121.296554.43.68.66770512.40.0592156
309.375497.30.074121591.119713.83.19.3754.190.0702405
PeakCounter: 30
DISPLAY GEL LANE LETTER: Lane f
DIGITAL REPORT GEL LANE: 7
LANE TYPE: pI Markers
ACTUAL GEL LANE: 7
Go to Gel Schematic
Return to Lane Navigator
BandpILoc% RFAmplitudeWidthIntegr. OD% Integr. OD% Lane IntODpIG. LocG. SigmaG. Ampl
14.55151.90.064166830.3492193.82.84.5514.730.0651438
25.210213.20.073136650.5534756.14.45.2102.14.70.0667066
35.8521027.10.040237640.2478092.725.85209.73.80.0370658
46.5534844.90.13128971.5124416.612.16.55346.670.122315
56.85380490.04479850.3861614.23.16.85379.65.40.0402365
67.3544657.50.088928840.5822796.44.77.35446.43.70.0892252
78.1557373.90.15417861.7187418.813.88.15572.46.40.151886
88.4564483.10.1755661.848220.214.88.45643.960.174198
98.6569890.10.13642540.8792579.678.65698.13.70.135154
109.375497.30.0498866121.058611.68.59.3751.112.40.0483421
PeakCounter: 10
Gel Banding Patterns Display in HTML using GIF stacking technique
(Uses Migration Position Normalized Data from above text peak reports)

Return to Lane Navigator    Go to Gel Schematic Key

a b c d e f
MK SP MK CO SP MK
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pI 4.55 label for gel schematic
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pI 5.20 label for gel schematic
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pI 4.55 label for gel schematic
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pI 5.20 label for gel schematic
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pI 5.8 label for gel schematic
white spacer for gel schematic
pI 6.55 label for gel schematic
white spacer for gel schematic
pI 6.85 label for gel schematic
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pI 7.35 label for gel schematic
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pI 8.15 label for gel schematic
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pI 8.45 label for gel schematic
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Key to Gel Schematic: MK=pI Marker Lanes, pI bands are in red
SP=Specimen Lanes, Specimen bands are in blue
CO=Co-migrated Lanes of pI Markers and Specimen (pI bands are in red, Specimen bands are in blue)
Note:  In co-migrated lanes, some pI Markers and Specimen bands may overlap in experiment.  Red pI
band is reported when overlapped peak position is equal to nominal pI Marker position.  Blue Specimen
band is reported when overlapped peak position deviates slightly from nominal pI Marker position.
Weak (<2% rel. intensity), Medium (2-6% rel. intensity), and Strong (>6% rel. intensity) band intensities indicated by gel schematic band thickness.
Return to Top of Gel Schematic

PeakCount: 123
HTML Forms TextArea Normalized Peak-Position Peak-Area for Copy-Paste events
DISPLAY GEL LANE LETTER: Lane a
DIGITAL REPORT GEL LANE: 2
LANE TYPE: pI Markers
ACTUAL GEL LANE: 2
PeakCount: 10 Return to Lane Navigator
DISPLAY GEL LANE LETTER: Lane b
DIGITAL REPORT GEL LANE: 3
LANE TYPE: Specimen
ACTUAL GEL LANE: 3
PeakCount: 30 Return to Lane Navigator
DISPLAY GEL LANE LETTER: Lane c
DIGITAL REPORT GEL LANE: 4
LANE TYPE: pI Markers
ACTUAL GEL LANE: 4
PeakCount: 10 Return to Lane Navigator
DISPLAY GEL LANE LETTER: Lane d
DIGITAL REPORT GEL LANE: 5
LANE TYPE: Co-Migrated
ACTUAL GEL LANE: 5
PeakCount: 33 Return to Lane Navigator
DISPLAY GEL LANE LETTER: Lane e
DIGITAL REPORT GEL LANE: 6
LANE TYPE: Specimen
ACTUAL GEL LANE: 6
PeakCount: 30 Return to Lane Navigator
DISPLAY GEL LANE LETTER: Lane f
DIGITAL REPORT GEL LANE: 7
LANE TYPE: pI Markers
ACTUAL GEL LANE: 7
PeakCount: 10 Return to Lane Navigator



 RETURN TO TOP THIS DOCUMENT
EXPERIMENTAL CONDITIONS: Gels were scanned at 600 d.p.i. in Adobe Photoshop 3.02 using a Sharp JX-325 Scanner with Film Scanner Attachment. Gels were analyzed for Densitometry, Intregration, and Migration Position Normalization in EXCEL 5.0 Format. *.xls files were imported into Paradox 7.0 to save as *.db files.

 RETURN TO TOP THIS DOCUMENT
Delphi 4.0 Generation of this Isoelectric Focusing (IEF) RFE PAGE 5 Tools in HTML
This HTML is automatically generated from a series of Paradox 7.0 database filesof IEF peak reports is controlled with a main RFEIEF Paradox 7.0 database withDelphi 3.0 front end (see Delphi 2.0 form) and back end for facile addition and modification of the Content of these RFE PAGE 5 HTML tools.
Contact Brad Tenge at btenge@ora.fda.gov for details.


RFE Contacts
A summary list of RFE contact personnel is available at http://www.cfsan.fda.gov/~frf/rfecon.html.

For isoelectric focusing laboratory experiments for fish species identification, you may contact

For isoelectric focusing gel analysis and pattern recognition applications, you may contact

For CFSAN web consultation and posting, you may contact


Thank you for using the Regulatory Fish Encyclopedia (RFE)!

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Last updated on 2003-FEB-27 by bjt/frf/nln