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Streptococcus mutans Search Results

Record: 1 of 1  
MiniMap tRNA-Ala-3 rRNA-16S-3 rRNA-23S-3 IGR1377 IGR1374 IGR1376 IGR1375 IGR1379 IGR1373 IGR1372 IGR1371 SMu1595 SMu1596 SMu1597 SMu1599 SMu1598 SMu1601 SMu1605 SMu1602 SMu1603 SMu1606 SMu1595 SMu1596 SMu1597 SMu1599 SMu1598 SMu1601 SMu1605 SMu1602 SMu1603 SMu1606 Type: tandem, Name: SMu-TR-28 - 28 SMu1596 SMu1598 SMu1602 SMu1603 SMu1606 SMu1600 SMu1604 SMu1601 SMu1595 SMu1597 SMu1599 SMu1605 SMu1600 SMu1604


LANL Gene ID: SMu1599

GenBank Locus Tag: SMU.1755c

DNA Molecule Name:
1  

GenBank ID:
24380125

Gene Name:


Definition:
conserved hypothetical protein

Cellular Location:
Cytoplasm [Evidence]

Gene Start:
1663506

Gene Stop:
1663207

Gene Length:
300

Molecular Weight*:
11615

pI*:
10.60

Net Charge*:
5.47

EC:
 

Functional Class:
Unknown  

Gene Ontology:

Pathway: pathway table

Comment:


View in HOMD Genome Viewer

Blast Summary:  PSI-Blast Search
Limited hits in gapped BLAST to conserved hypothetical proteins. Residues 3-99 are 72% similar to 15675454 from S.pyogenes and 31% similar to 15612904 from B.haldurans.





SMu1599 has no significant similarity (BLAST p-value < 1e-3) to Streptococcus agalactiae


Top Blast Hits:  Updated monthly
Click here to view the entire PsiBlast results.
 gi|24380125|ref|NP_722080.1|  hypothetical protein SMU.1755c...   161   1e-38
 gi|71903952|ref|YP_280755.1|  hypothetical protein M28_Spy12...   139   7e-32
 gi|94988910|ref|YP_597011.1|  hypothetical protein MGAS9429_...   138   1e-31
 gi|15675454|ref|NP_269628.1|  hypothetical protein SPy_1562 ...   137   2e-31
 gi|119026198|ref|YP_910043.1|  CRISPR-associated DNA polymer...    77   3e-13
 gi|94990876|ref|YP_598976.1|  hypothetical protein MGAS10270...    75   9e-13
 gi|109646590|ref|ZP_01370494.1|  CRISPR-associated protein C...    73   5e-12
 gi|154495124|ref|ZP_02034129.1|  hypothetical protein PARMER...    72   7e-12
 gi|68549525|ref|ZP_00588988.1|  Protein of unknown function ...    70   4e-11
 gi|21673956|ref|NP_662021.1|  hypothetical protein CT1130 [C...    70   5e-11


InterPro Summary:  InterProScan

No hits reported.

COGS Summary:  COGS Search
BeTs to 3 clades of COG1518
COG name: Uncharacterized ACR
Functional Class: S
The phylogenetic pattern of COG1518 is AmtK-qv---r----------
Number of proteins in this genome belonging to this COG is 2
Blocks Summary:  Blocks Search
No significant hits to the Blocks database.

 ProDom Summary:  Protein Domain Search
Residues 3-99 are 31% similar to a (PROTEOME COMPLETE MJ0378 PH0173) protein domain (PD008695 which is seen in Q9KFX9_BACHD.


Paralogs:  Local Blast Search
SMu1599 has no significant similarity (blastp p-value < 1e-3) to any other gene in this genome.


Pfam Summary:  Pfam Search
No significant hits to the Pfam 11.0 database

 Top PDB Hits:
No significant hits to the NCBI PDB database.

Gene Protein Sequence:
MAILLRRQQYRLADNDLSLAYAKRFILAKISNARKYLLRFRRDHRAKINQ
QLFEEVNTELTFALEMVATARDKDTLLGIEGQAANHYFRAFNDLVLTDK

Gene Nucleotide Sequence:  Sequence Viewer
ATGGCAATCCTTTTACGACGTCAGCAGTATAGGCTAGCTGATAATGACCT
TTCTCTGGCGTATGCCAAACGGTTTATCCTGGCAAAGATTTCAAATGCCA
GAAAGTATCTATTACGGTTTCGGCGTGACCATCGAGCCAAAATAAATCAA
CAACTTTTTGAGGAAGTCAATACTGAGTTGACTTTTGCTCTGGAAATGGT
GGCTACTGCAAGAGATAAGGATACTTTACTTGGTATTGAAGGTCAAGCTG
CTAACCACTATTTCCGTGCTTTTAATGATTTAGTCTTGACAGATAAGTAG

Los Alamos National Laboratory • Est 1943

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