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Streptococcus mutans Search Results

Record: 1 of 1  
MiniMap IGR1269 IGR1268 IGR1263 IGR1266 IGR1271 IGR1272 IGR1267 IGR1265 IGR1262 IGR1270 rpmG, - SMu1464 secG, - SMu1463 SMu1470 SMu1473 msrA, - SMu1476 SMu1469 fpg,mutM, - SMu1468 SMu1466 SMu1477 era, - SMu1471 phoH, - SMu1474 pmrA, - SMu1465 rnr,vacB1, - SMu1462 rpmG, - SMu1464 secG, - SMu1463 SMu1470 SMu1473 msrA, - SMu1476 SMu1469 fpg,mutM, - SMu1468 SMu1466 SMu1477 era, - SMu1471 phoH, - SMu1474 pmrA, - SMu1465 rnr,vacB1, - SMu1462 secG, - SMu1463 SMu1469 fpg,mutM, - SMu1468 SMu1466 era, - SMu1471 phoH, - SMu1474 pmrA, - SMu1465 rnr,vacB1, - SMu1462 SMu1475 dgk,dgkA, - SMu1472 SMu1467 SMu1467 SMu1473 SMu1477 rpmG, - SMu1464 SMu1470 dgk,dgkA, - SMu1472 msrA, - SMu1476 SMu1475


LANL Gene ID: SMu1469

GenBank Locus Tag: SMU.1615c

DNA Molecule Name:
1  

GenBank ID:
24379995

Gene Name:


Definition:
conserved hypothetical protein

Cellular Location:
Cytoplasm [Evidence]

Gene Start:
1544628

Gene Stop:
1544104

Gene Length:
525

Molecular Weight*:
19925

pI*:
4.30

Net Charge*:
-14.13

EC:
 

Functional Class:
Unknown  

Gene Ontology:

Pathway: pathway table

Comment:


View in HOMD Genome Viewer

Blast Summary:  PSI-Blast Search
Matches in gapped BLAST to hypotheticals and conserved hypotheticals:residues 5-167 are 32% similar to 15839831| from
Mycobacterium tuberculosis and residues 5-170 are 30% similar to 7479626| from S.coelicolor





SMu1469 has no significant similarity (BLAST p-value < 1e-3) to Streptococcus agalactiae


Top Blast Hits:  Updated monthly
Click here to view the entire PsiBlast results.
 gi|24379995|ref|NP_721950.1|  hypothetical protein SMU.1615c...   338   9e-92
 gi|69248978|ref|ZP_00604836.1|  conserved hypothetical prote...   223   3e-57
 gi|81428899|ref|YP_395899.1|  hypothetical protein LSA1288 [...   149   6e-35
 gi|29377481|ref|NP_816635.1|  hypothetical protein EF3021 [E...   140   2e-32
 gi|62424275|ref|ZP_00379423.1|  hypothetical protein BlinB01...   104   3e-21
 gi|119718836|ref|YP_925801.1|  hypothetical protein Noca_461...   102   9e-21
 gi|29827705|ref|NP_822339.1|  hypothetical protein SAV1164 [...   101   2e-20
 gi|118470336|ref|YP_885290.1|  hypothetical protein MSMEG_08...    96   9e-19
 gi|108797591|ref|YP_637788.1|  hypothetical protein Mmcs_061...    96   1e-18
 gi|120401784|ref|YP_951613.1|  hypothetical protein Mvan_076...    94   3e-18


InterPro Summary:  InterProScan

noIPR
unintegrated
unintegrated
SSF109854 [1-173]T 1.1E-6 SSF109854 SSF109854 SSF109854


COGS Summary:  COGS Search
No hits to the COGs database.
Blocks Summary:  Blocks Search
No significant hits to the Blocks database.

 ProDom Summary:  Protein Domain Search
Residues 5-167 are 32% similar to a (PROTEOME COMPLETE) protein domain (PD098493 which is seen in O53728_MYCTU.


Paralogs:  Local Blast Search
SMu1469 has no significant similarity (blastp p-value < 1e-3) to any other gene in this genome.


Pfam Summary:  Pfam Search
No significant hits to the Pfam 11.0 database

 Top PDB Hits:
No significant hits to the NCBI PDB database.

Gene Protein Sequence:
MDYLDMLIDSLNRVRERFWRMFKGVTVEQANCFPVADTAPQIKSLTWLAW
HTARELDLQISALAGQESIWDSQGFKEYFPFEVAETEDGWDHSLEQAQKI
KVDHLDDVLDYLNDATDFAILYLKSLNPECLDDIVDDSWTPAVTRGVRLV
SIIDDAAMHSGQAIYARRLLGLKD

Gene Nucleotide Sequence:  Sequence Viewer
ATGGACTATTTAGATATGTTAATTGATAGTCTCAATCGGGTTAGAGAACG
TTTTTGGCGTATGTTTAAAGGAGTGACAGTAGAGCAAGCTAATTGTTTCC
CAGTTGCTGATACTGCACCGCAGATAAAATCACTGACTTGGCTAGCATGG
CATACAGCGCGTGAATTGGATTTGCAGATTTCAGCTTTGGCAGGGCAGGA
GTCCATCTGGGACAGTCAAGGTTTTAAAGAGTATTTTCCTTTTGAAGTGG
CAGAAACAGAAGACGGTTGGGATCACAGCTTAGAGCAAGCTCAAAAAATT
AAGGTCGATCACTTAGATGATGTTTTAGATTATCTCAATGATGCTACAGA
TTTTGCCATTCTTTACCTGAAATCACTTAATCCAGAATGTCTAGATGATA
TTGTAGATGATTCTTGGACACCAGCTGTGACGCGTGGTGTACGCTTGGTT
TCCATCATTGATGATGCTGCTATGCACTCAGGACAAGCTATTTATGCTCG
TCGTTTGCTTGGTTTGAAGGATTAG

Los Alamos National Laboratory • Est 1943

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