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Streptococcus mutans Search Results

Record: 1 of 1  
MiniMap IGR981 IGR978 IGR975 IGR980 IGR973 IGR972 IGR976 IGR982 IGR977 IGR979 SMu1126 SMu1127 SMu1132 SMu1125 SMu1133 nrd,ybiE, - SMu1135 rpiA, - SMu1129 SMu1131 deoB,ppm, - SMu1128 pepV, - SMu1134 uvrC, - SMu1136 thdF, - SMu1130 SMu1126 SMu1127 SMu1132 SMu1125 SMu1133 nrd,ybiE, - SMu1135 rpiA, - SMu1129 SMu1131 deoB,ppm, - SMu1128 pepV, - SMu1134 uvrC, - SMu1136 thdF, - SMu1130 SMu1125 SMu1133 nrd,ybiE, - SMu1135 rpiA, - SMu1129 SMu1131 deoB,ppm, - SMu1128 pepV, - SMu1134 uvrC, - SMu1136 SMu1127 SMu1132 SMu1126 thdF, - SMu1130


LANL Gene ID: SMu1131

GenBank Locus Tag: SMU.1236c

DNA Molecule Name:
1  

GenBank ID:
24379660

Gene Name:


Definition:
conserved hypothetical protein (possible dihydroorotase family)

Cellular Location:
Cytoplasm [Evidence]

Gene Start:
1175848

Gene Stop:
1175045

Gene Length:
804

Molecular Weight*:
30021

pI*:
6.40

Net Charge*:
-1.88

EC:
 

Functional Class:
Unknown  

Gene Ontology:
Biological process
  GO:0008152    metabolic process

Molecular function
  GO:0001760    aminocarboxymuconate-semialdehyde decarboxylase activity


Pathway: pathway table

Comment:


View in HOMD Genome Viewer

Blast Summary:  PSI-Blast Search
Matches in gapped BLAST to amidohodrolase and hypothetical proteins:residues 1-265 are 40% similar to Clostridium acetobutylicum (15896580|ref|NP_349929.1) residues 73-234 are 25% similar to Pyrococcus abyssi (14520316|) and are 26% similar to Pyrococcus horikoshii (14590044|).





SMu1131 has no significant similarity (BLAST p-value < 1e-3) to Streptococcus agalactiae


Top Blast Hits:  Updated monthly
Click here to view the entire PsiBlast results.
 gi|24379660|ref|NP_721615.1|  hypothetical protein SMU.1236c...   544   e-153
 gi|148323311|gb|EDK88561.1|  hypothetical protein FNP_0759 [...   352   2e-95
 gi|154175337|ref|YP_001409158.1|  putative transducer (chemo...   314   4e-84
 gi|154687477|ref|YP_001422638.1|  hypothetical protein RBAM_...   240   6e-62
 gi|15896580|ref|NP_349929.1|  Predicted amidohodrolase (dihy...   219   1e-55
 gi|153953203|ref|YP_001393968.1|  hypothetical protein CKL_0...   128   3e-28
 gi|149180924|ref|ZP_01859426.1|  hypothetical protein BSG1_0...    63   2e-08
 gi|20807812|ref|NP_622983.1|  predicted metal-dependent hydr...    59   3e-07
 gi|14520316|ref|NP_125791.1|  hypothetical protein PAB0058 [...    59   4e-07
 gi|154499917|ref|ZP_02037955.1|  hypothetical protein BACCAP...    55   5e-06


InterPro Summary:  InterProScan

InterPro
IPR006992
Family
Amidohydrolase 2
PF04909 [31-265]T 1.2000011745814003E-22 PF04909 Amidohydro_2 Amidohydro_2
noIPR
unintegrated
unintegrated
SSF51556 [1-265]T 3.7999999999999996E-7 SSF51556 SSF51556 SSF51556


COGS Summary:  COGS Search
No hits to the COGs database.
Blocks Summary:  Blocks Search
No significant hits to the Blocks database.

 ProDom Summary:  Protein Domain Search
Residues 73-234 are 25% similar to a (PROTEOME COMPLETE VNG0297H PH0093) protein domain (PD119883 which is seen in Q9V2H6_PYRAB.


Paralogs:  Local Blast Search
SMu1131 has no significant similarity (blastp p-value < 1e-3) to any other gene in this genome.


Pfam Summary:  Pfam Search
Residues 1 to 265 (E-value = 1.5e-20) place SMu1131 in the Amidohydro_2 family which is described as Amidohydrolase (PF04909)

 Top PDB Hits:
No significant hits to the NCBI PDB database.

Gene Protein Sequence:
MIIDNIQHVMFPIAAQVEKLEKAKVDKAILFCTTPHPERARSYKELKEEM
SILFKVLSGDGLQVVSLDRMKQNNQKVVQAIQKYPQKFYGFGSVPLGLSL
NDTIDWIEEQIVRNGLKGLGEFTPGSDEQVGQLETIFQALAKFPSLPVWV
HTFNPVSLKGIQTLMNLTKKYPHISVIFGHMGGYYWMNVIDFVKETPNAF
IDLSGTFSTLAVRMAITEIPQKCLFGSDAPYGEPFMSKELVEYLAPTDTI
RDMVLGGNIQKLLELSN

Gene Nucleotide Sequence:  Sequence Viewer
ATGATTATTGATAATATCCAGCATGTTATGTTTCCAATAGCAGCGCAGGT
TGAAAAACTGGAGAAAGCAAAAGTTGATAAAGCTATTTTATTTTGTACGA
CACCGCATCCTGAAAGAGCTCGTTCCTATAAAGAACTAAAAGAAGAGATG
TCAATACTATTTAAAGTTCTAAGTGGAGATGGACTGCAGGTTGTTTCACT
AGACAGAATGAAACAAAATAATCAAAAAGTTGTGCAAGCGATTCAAAAGT
ATCCGCAAAAGTTTTATGGCTTTGGTTCTGTTCCGCTTGGTTTATCTTTA
AATGATACTATTGATTGGATCGAAGAACAAATTGTAAGAAATGGTTTGAA
AGGCTTAGGAGAGTTTACTCCCGGTTCAGATGAACAGGTTGGACAATTAG
AAACTATTTTCCAAGCGTTAGCTAAATTTCCTAGTTTACCTGTTTGGGTA
CATACTTTTAATCCAGTCAGTTTAAAAGGCATCCAAACTTTGATGAACTT
AACAAAAAAATACCCTCATATTTCTGTAATCTTTGGACATATGGGAGGGT
ATTATTGGATGAATGTTATTGATTTTGTCAAAGAAACGCCAAATGCTTTT
ATTGACTTATCTGGAACCTTCTCTACTTTGGCTGTAAGGATGGCTATCAC
TGAAATTCCTCAAAAATGTTTATTTGGTTCTGACGCTCCTTATGGAGAAC
CCTTTATGAGTAAGGAATTGGTTGAATACTTGGCACCTACTGATACTATT
AGAGATATGGTATTGGGAGGAAATATTCAAAAATTGTTAGAGCTGTCTAA
TTAA

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