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Streptococcus mutans Search Results

Record: 1 of 1  
MiniMap IGR727 IGR733 IGR729 IGR734 IGR728 IGR730 IGR735 SMu0843 cpsY, - SMu0844 SMu0835 SMu0839 tpx, - SMu0838 SMu0840 llrF, - SMu0841 SMu0845 kinF, - SMu0842 SMu0836 SMu0843 cpsY, - SMu0844 SMu0835 SMu0839 tpx, - SMu0838 SMu0840 llrF, - SMu0841 SMu0845 kinF, - SMu0842 SMu0836 SMu0843 cpsY, - SMu0844 SMu0835 SMu0839 tpx, - SMu0838 SMu0840 llrF, - SMu0841 SMu0845 kinF, - SMu0842 SMu0836 SMu0837 SMu0837


LANL Gene ID: SMu0839

GenBank Locus Tag: SMU.925

DNA Molecule Name:
1  

GenBank ID:
24379370

Gene Name:


Definition:
hypothetical protein

Cellular Location:
Membrane, Cytoplasm [Evidence]

Gene Start:
879393

Gene Stop:
879863

Gene Length:
471

Molecular Weight*:
17604

pI*:
10.60

Net Charge*:
11.79

EC:
 

Functional Class:
Hypothetical  

Gene Ontology:

Pathway: pathway table

Comment:



View in HOMD Genome Viewer

Blast Summary:  PSI-Blast Search
No significant hits in gapped BLAST found.






SMu0839 has no significant similarity (BLAST p-value < 1e-3) to Streptococcus agalactiae


Top Blast Hits:  Updated monthly
Click here to view the entire PsiBlast results.
 gi|24379370|ref|NP_721325.1|  hypothetical protein SMU.925 [...   216   4e-55
 gi|24380263|ref|NP_722218.1|  putative immunity protein, BLp...   159   4e-38


InterPro Summary:  InterProScan

noIPR
unintegrated
unintegrated
signalp [1-48]? NA signalp signal-peptide signal-peptide
tmhmm [29-47]? NA tmhmm transmembrane_regions[57-77]? NA tmhmm transmembrane_regions[92-110]? NA tmhmm transmembrane_regions[124-144]? NA tmhmm transmembrane_regions transmembrane_regions


COGS Summary:  COGS Search
No hits to the COGs database.
Blocks Summary:  Blocks Search
No significant hits to the Blocks database.

 ProDom Summary:  Protein Domain Search
No significant hits to the ProDom database.

Paralogs:  Local Blast Search
SMu0839 is paralogously related (blast p-value < 1e-3) to SMu1737, a predicted immunity protein BlpL.


Pfam Summary:  Pfam Search
No significant hits to the Pfam 11.0 database

 Structural Feature(s):
Feature Type  Start  Stop
transmembrane  
32  
48
transmembrane  
56  
72
transmembrane  
93  
109
transmembrane  
124  
140

Top PDB Hits:
No significant hits to the NCBI PDB database.

Gene Protein Sequence:
MLYCTANYMNIILGEEKDMSRKKSRKLKLLRLLTAQLIAICLLIMVLTQA
IFKSPLLVQVCFLIITLCTAGLNYYFIKEAREANAQESSAATVTSQVIFT
VVFLLLMVLSGYKAIQVSEFASKIIFSAAAVISFIVSLLLLWGIRYVKKT
SFFRKR

Gene Nucleotide Sequence:  Sequence Viewer
ATGCTGTATTGTACAGCCAACTATATGAATATTATTTTAGGTGAGGAGAA
AGATATGTCCAGAAAGAAAAGTCGGAAACTGAAGTTATTGAGACTTTTAA
CAGCACAGCTTATTGCTATTTGTTTGTTAATTATGGTTTTGACACAAGCT
ATTTTTAAATCTCCTCTGCTTGTTCAGGTTTGCTTTTTAATTATAACGCT
TTGTACAGCTGGTCTGAATTATTATTTCATTAAAGAAGCTAGAGAGGCAA
ATGCACAAGAAAGTTCTGCTGCTACAGTTACTAGTCAAGTTATCTTTACT
GTCGTGTTTTTGCTTTTGATGGTTTTAAGCGGTTATAAGGCCATTCAAGT
AAGCGAATTTGCCAGTAAGATCATCTTCTCAGCTGCTGCTGTAATTAGTT
TTATTGTCTCTCTTCTTTTATTATGGGGAATAAGATATGTCAAAAAAACC
AGCTTTTTTAGAAAACGCTAA

Los Alamos National Laboratory • Est 1943

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