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Streptococcus mutans Search Results

Record: 1 of 1  
MiniMap IGR559 IGR558 IGR553 IGR549 IGR555 IGR560 IGR556 IGR552 IGR551 IGR550 IGR554 IGR557 fer, - SMu0634 SMu0641 gpmB, - SMu0640 SMu0643 SMu0644 rpmI, - SMu0638 rplT, - SMu0639 SMu0635 thmA, - SMu0633 infC, - SMu0637 SMu0631 cmk, - SMu0636 pepT, - SMu0632 atlA,aml, - SMu0630 fer, - SMu0634 SMu0641 gpmB, - SMu0640 SMu0643 SMu0644 rpmI, - SMu0638 rplT, - SMu0639 SMu0635 thmA, - SMu0633 infC, - SMu0637 SMu0631 cmk, - SMu0636 pepT, - SMu0632 atlA,aml, - SMu0630 fer, - SMu0634 gpmB, - SMu0640 SMu0644 ydbF, - SMu0642 SMu0641 SMu0643 ydbF, - SMu0642 rplT, - SMu0639 SMu0635 thmA, - SMu0633 infC, - SMu0637 SMu0631 cmk, - SMu0636 pepT, - SMu0632 atlA,aml, - SMu0630 rpmI, - SMu0638


LANL Gene ID: SMu0635

GenBank Locus Tag: SMU.695

DNA Molecule Name:
1  

GenBank ID:
24379166

Gene Name:


Definition:
conserved hypothetical protein

Cellular Location:
Extracellular, Membrane [Evidence]

Gene Start:
659291

Gene Stop:
659773

Gene Length:
483

Molecular Weight*:
17215

pI*:
4.50

Net Charge*:
-8.52

EC:
 

Functional Class:
Unknown  

Gene Ontology:
Biological process
  GO:0016998    cell wall catabolic process


Pathway: pathway table

Comment:


View in HOMD Genome Viewer

Blast Summary:  PSI-Blast Search
Limited matches in gapped BLAST to hypothetical proteins: residues 1-160 are 33% similar to the protein in S.pyogenes (15674844|) are 26% similar to the protein from S.pneumoniae (15901444).






The best hit to the Streptococcus agalactiae 2603 V/R genome is to SAG1386 (2e-15).


Top Blast Hits:  Updated monthly
Click here to view the entire PsiBlast results.
 gi|24379166|ref|NP_721121.1|  hypothetical protein SMU.695 [...   215   6e-55
 gi|21910072|ref|NP_664340.1|  hypothetical protein SpyM3_053...   145   8e-34
 gi|15674844|ref|NP_269018.1|  hypothetical protein SPy_0802 ...   144   2e-33
 gi|94994100|ref|YP_602198.1|  hypothetical membrane associat...   143   3e-33
 gi|139474016|ref|YP_001128732.1|  hypothetical protein SpyM5...   142   6e-33
 gi|71903262|ref|YP_280065.1|  hypothetical membrane associat...   141   9e-33
 gi|25011498|ref|NP_735893.1|  hypothetical protein gbs1456 [...   118   8e-26
 gi|22537533|ref|NP_688384.1|  hypothetical protein SAG1386 [...   117   2e-25
 gi|76786875|ref|YP_330027.1|  hypothetical protein SAK_1419 ...   117   2e-25
 gi|77412666|ref|ZP_00788933.1|  Unknown [Streptococcus agala...   112   6e-24


InterPro Summary:  InterProScan

InterPro
IPR002482
Domain
Peptidoglycan-binding LysM
PF01476 [114-160]T 2.6000000024444803 PF01476 LysM LysM
noIPR
unintegrated
unintegrated
SSF54106 [110-159]T 1.1E-4 SSF54106 SSF54106 SSF54106


COGS Summary:  COGS Search
No hits to the COGs database.
Blocks Summary:  Blocks Search
No significant hits to the Blocks database.

 ProDom Summary:  Protein Domain Search
No significant hits to the ProDom database.

Paralogs:  Local Blast Search
SMu0635 is paralogously related (blast p-value < 1e-3) to SMu1952, a predicted conserved hypothetical protein, SMu0631, a predicted hypothetical protein and SMu0424, a predicted penicillin-binding protein 1a.


Pfam Summary:  Pfam Search
No significant hits to the Pfam 11.0 database

 Structural Feature(s):
Feature Type  Start  Stop
transmembrane  
37  
53

Top PDB Hits:
No significant hits to the NCBI PDB database.

Gene Protein Sequence:
MSNKPWEEKVTDATTDNEEMTRNSKDASIISTPILTILLSLFFLIIIGIL
FFVLYTSNGGSNEKAATSGFYSSSKTVKKAKNEANSQTDEQTTEAETSSS
ETTSSSSDSDGETITVQGGEGAAAIAARAGISVDKLYELNPEHMTHGYWY
ANPGDNIKIK

Gene Nucleotide Sequence:  Sequence Viewer
ATGTCAAATAAACCATGGGAAGAAAAAGTAACTGATGCAACTACTGATAA
TGAAGAAATGACAAGAAATTCAAAGGATGCTAGTATTATCAGTACACCTA
TTTTAACAATCCTATTGAGCCTCTTTTTCTTGATTATTATTGGTATTTTA
TTTTTTGTACTTTATACTTCAAATGGTGGAAGCAATGAAAAAGCAGCCAC
TTCGGGTTTCTATAGTTCTTCCAAAACGGTCAAAAAAGCCAAAAATGAGG
CAAATAGTCAAACTGATGAACAGACAACAGAAGCAGAAACAAGTTCAAGT
GAAACGACAAGTTCCTCTTCAGACAGTGATGGCGAGACAATTACAGTTCA
AGGAGGTGAAGGGGCTGCAGCAATTGCTGCGCGTGCGGGTATTTCTGTTG
ATAAACTCTATGAGCTGAATCCAGAACATATGACGCATGGCTATTGGTAT
GCTAACCCTGGAGATAACATCAAGATTAAGTAA

Los Alamos National Laboratory • Est 1943

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