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Streptococcus mutans Search Results

Record: 1 of 1  
MiniMap IGR462 IGR457 IGR464 IGR465 IGR460 IGR459 IGR461 IGR466 IGR458 IGR463 SMu0537 SMu0539 pyrD, - SMu0542 SMu0538 SMu0541 hlpA,hslA, - SMu0536 furR,spf, - SMu0540 hlyX, - SMu0530 SMu0534 recN, - SMu0532 SMu0537 SMu0539 pyrD, - SMu0542 SMu0538 SMu0541 hlpA,hslA, - SMu0536 furR,spf, - SMu0540 hlyX, - SMu0530 SMu0534 recN, - SMu0532 SMu0537 SMu0539 pyrD, - SMu0542 SMu0538 hlpA,hslA, - SMu0536 furR,spf, - SMu0540 hlyX, - SMu0530 SMu0534 recN, - SMu0532 argR,ahrC, - SMu0531 SMu0535 SMu0533 argR,ahrC, - SMu0531 SMu0533 SMu0535 SMu0541


LANL Gene ID: SMu0535

GenBank Locus Tag: SMU.588

DNA Molecule Name:
1  

GenBank ID:
24379066

Gene Name:


Definition:
conserved hypothetical protein

Cellular Location:
Membrane, Extracellular [Evidence]

Gene Start:
548636

Gene Stop:
549235

Gene Length:
600

Molecular Weight*:
22525

pI*:
10.50

Net Charge*:
11.22

EC:
 

Functional Class:
Unknown  

Gene Ontology:

Pathway: pathway table

Comment:



View in HOMD Genome Viewer

Blast Summary:  PSI-Blast Search



Limited matches in gapped BLAST to conserved hypothetical proteins:residues 30-197 are 57% similar to S.pyogenes (15675395|) and 40% similar to residues 30-197 from Lactococcus lactis subsp. lactis (15675395|).








The best hit to the Streptococcus agalactiae 2603 V/R genome is to SAG0504 (1e-56).


Top Blast Hits:  Updated monthly
Click here to view the entire PsiBlast results.
 gi|24379066|ref|NP_721021.1|  hypothetical protein SMU.588 [...   361   2e-98
 gi|77414013|ref|ZP_00790185.1|  conserved hypothetical prote...   228   1e-58
 gi|22536683|ref|NP_687534.1|  hypothetical protein SAG0504 [...   228   1e-58
 gi|77405311|ref|ZP_00782407.1|  conserved hypothetical prote...   226   5e-58
 gi|19746445|ref|NP_607581.1|  hypothetical protein spyM18_15...   208   1e-52
 gi|15675395|ref|NP_269569.1|  hypothetical protein SPy_1491 ...   208   2e-52
 gi|76799719|ref|ZP_00781815.1|  YfaA [Streptococcus agalacti...   192   1e-47
 gi|81096212|ref|ZP_00874560.1|  similar to unknown proteins ...   155   2e-36
 gi|146319302|ref|YP_001199014.1|  hypothetical protein SSU05...   153   5e-36
 gi|15672483|ref|NP_266657.1|  hypothetical protein L101577 [...   131   2e-29


InterPro Summary:  InterProScan

noIPR
unintegrated
unintegrated
signalp [1-33]? NA signalp signal-peptide signal-peptide
tmhmm [15-35]? NA tmhmm transmembrane_regions transmembrane_regions


COGS Summary:  COGS Search
No hits to the COGs database.
Blocks Summary:  Blocks Search
No significant hits to the Blocks database.

 ProDom Summary:  Protein Domain Search
Residues 30-193 are 40% similar to a (COMPLETE PROTEOME YFAA BH1181) protein domain (PD035119 which is seen in Q9CI65_LACLA.


Paralogs:  Local Blast Search

SMu0535 has no significant similarity (blastp p-value < 1e-3) to any other gene in this genome.


Pfam Summary:  Pfam Search
No significant hits to the Pfam 11.0 database

 Structural Feature(s):
Feature Type  Start  Stop
uncleavable  
1  
28
transmembrane  
16  
32

Top PDB Hits:
No significant hits to the NCBI PDB database.

Gene Protein Sequence:
MKQRRTGNKKNWWKWAFLLLLALNIAFWGVIISRVLSGYHSNTITSQTVK
NPVKVGTITTTKEQLNQTLASYLNDYQSKGMTYSVQLTSTNIEFQGTYKL
LGYNVPLYIYFEPYQLKSGAVQLKVTSFSVGNLPLPASEVLSYIKSSYKL
PNFVDVIPEKSVVNINLQKIDNDAGIYLKSTAINLVSDEINFDILKKKR

Gene Nucleotide Sequence:  Sequence Viewer
GTGAAACAAAGAAGAACTGGAAATAAAAAAAATTGGTGGAAATGGGCTTT
TCTGCTTTTATTAGCACTCAATATTGCTTTTTGGGGAGTGATTATCAGTC
GTGTTTTGAGCGGTTACCATTCTAATACAATAACAAGTCAAACAGTAAAA
AATCCTGTTAAGGTTGGAACAATTACGACAACTAAAGAACAATTGAATCA
GACCTTGGCAAGTTATTTGAATGATTATCAGTCTAAGGGTATGACCTACA
GTGTTCAACTAACTTCAACAAACATTGAATTTCAAGGAACTTATAAACTT
CTAGGTTATAACGTGCCTCTTTATATCTATTTTGAACCTTATCAGTTAAA
AAGCGGAGCTGTCCAGCTTAAAGTGACTTCCTTTTCAGTAGGCAATCTTC
CTCTGCCAGCATCAGAGGTTCTTAGTTATATTAAATCAAGTTACAAACTG
CCAAATTTTGTTGATGTTATTCCAGAGAAGTCTGTTGTTAATATCAATTT
GCAAAAAATAGACAATGATGCAGGTATCTATTTAAAGTCAACAGCTATAA
ATTTGGTTAGTGATGAAATAAACTTTGATATTTTAAAGAAAAAACGTTAA

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